CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 175 & Codon = Tgt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1175R175CR175CnonsynCgtTgt105810540.996219788-790

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1175R175CCgtTgt10541058All0.000202
ORF1ab/nsp1175R175CCgtTgt357357AY.40.000556
ORF1ab/nsp1175R175CCgtTgt117117B.1.1.70.000105
ORF1ab/nsp1175R175CCgtTgt6060B.1.617.20.000226
ORF1ab/nsp1175R175CCgtTgt5252AY.430.00023
ORF1ab/nsp1175R175CCgtTgt4343AY.440.000262
ORF1ab/nsp1175R175CCgtTgt2425AY.1030.000149
ORF1ab/nsp1175R175CCgtTgt1821AY.1020.000477
ORF1ab/nsp1175R175CCgtTgt2020AY.250.00012
ORF1ab/nsp1175R175CCgtTgt1818AY.4.20.00039
ORF1ab/nsp1175R175CCgtTgt1717AY.330.001135
ORF1ab/nsp1175R175CCgtTgt1717AY.98.10.000823
ORF1ab/nsp1175R175CCgtTgt1717B.1.20.00015
ORF1ab/nsp1175R175CCgtTgt1515AY.420.000603
ORF1ab/nsp1175R175CCgtTgt1313AY.1190.000459
ORF1ab/nsp1175R175CCgtTgt1010AY.30.000099
ORF1ab/nsp1175R175CCgtTgt99AY.1140.00208
ORF1ab/nsp1175R175CCgtTgt99AY.230.000628
ORF1ab/nsp1175R175CCgtTgt99AY.50.000186
ORF1ab/nsp1175R175CCgtTgt88AY.370.002528
ORF1ab/nsp1175R175CCgtTgt88AY.7.10.000902
ORF1ab/nsp1175R175CCgtTgt88B.10.000073
ORF1ab/nsp1175R175CCgtTgt77AY.1050.004502
ORF1ab/nsp1175R175CCgtTgt77AY.1060.002344
ORF1ab/nsp1175R175CCgtTgt77B.1.3510.000208
ORF1ab/nsp1175R175CCgtTgt66AY.190.006842
ORF1ab/nsp1175R175CCgtTgt66AY.200.000233
ORF1ab/nsp1175R175CCgtTgt66AY.260.00017
ORF1ab/nsp1175R175CCgtTgt66AY.290.000095
ORF1ab/nsp1175R175CCgtTgt66AY.39.10.000238
ORF1ab/nsp1175R175CCgtTgt66P.10.000095
ORF1ab/nsp1175R175CCgtTgt55AY.140.00044
ORF1ab/nsp1175R175CCgtTgt55AY.9.10.000419
ORF1ab/nsp1175R175CCgtTgt55B.1.258.160.008183
ORF1ab/nsp1175R175CCgtTgt55B.1.4290.000118
ORF1ab/nsp1175R175CCgtTgt44AY.1000.000184
ORF1ab/nsp1175R175CCgtTgt44AY.1200.000149
ORF1ab/nsp1175R175CCgtTgt44AY.70.000784
ORF1ab/nsp1175R175CCgtTgt44B.1.177.40.000844
ORF1ab/nsp1175R175CCgtTgt44B.1.5960.000349
ORF1ab/nsp1175R175CCgtTgt33AY.460.000312
ORF1ab/nsp1175R175CCgtTgt33AY.46.60.000217
ORF1ab/nsp1175R175CCgtTgt33AY.470.000093
ORF1ab/nsp1175R175CCgtTgt33AY.690.00056
ORF1ab/nsp1175R175CCgtTgt33AY.9.20.00011
ORF1ab/nsp1175R175CCgtTgt33B.1.1.5190.000119
ORF1ab/nsp1175R175CCgtTgt33B.1.1.700.001023
ORF1ab/nsp1175R175CCgtTgt22AY.10.000791
ORF1ab/nsp1175R175CCgtTgt22AY.1110.000366
ORF1ab/nsp1175R175CCgtTgt22AY.120.000632
ORF1ab/nsp1175R175CCgtTgt22AY.3.10.000171
ORF1ab/nsp1175R175CCgtTgt22AY.350.000466
ORF1ab/nsp1175R175CCgtTgt22AY.4.50.000215
ORF1ab/nsp1175R175CCgtTgt22AY.520.001629
ORF1ab/nsp1175R175CCgtTgt22AY.60.000082
ORF1ab/nsp1175R175CCgtTgt22AY.90.000135
ORF1ab/nsp1175R175CCgtTgt22AY.920.000575
ORF1ab/nsp1175R175CCgtTgt22AY.980.000158
ORF1ab/nsp1175R175CCgtTgt22B.1.1770.000026
ORF1ab/nsp1175R175CCgtTgt22B.1.2340.000264
ORF1ab/nsp1175R175CCgtTgt22B.1.4970.00063
ORF1ab/nsp1175R175CCgtTgt22B.1.5260.000047
ORF1ab/nsp1175R175CCgtTgt22B.1.5950.000522
ORF1ab/nsp1175R175CCgtTgt22C.380.016129
ORF1ab/nsp1175R175CCgtTgt110.055556
ORF1ab/nsp1175R175CCgtTgt11A.10.000282
ORF1ab/nsp1175R175CCgtTgt11AM.40.003571
ORF1ab/nsp1175R175CCgtTgt11AY.1010.00049
ORF1ab/nsp1175R175CCgtTgt11AY.1180.000063
ORF1ab/nsp1175R175CCgtTgt11AY.1210.000135
ORF1ab/nsp1175R175CCgtTgt11AY.130.000161
ORF1ab/nsp1175R175CCgtTgt11AY.170.008197
ORF1ab/nsp1175R175CCgtTgt11AY.23.10.000417
ORF1ab/nsp1175R175CCgtTgt11AY.340.000097
ORF1ab/nsp1175R175CCgtTgt11AY.34.10.00051
ORF1ab/nsp1175R175CCgtTgt11AY.390.000025
ORF1ab/nsp1175R175CCgtTgt11AY.400.000964
ORF1ab/nsp1175R175CCgtTgt11AY.450.000122
ORF1ab/nsp1175R175CCgtTgt11AY.46.30.000934
ORF1ab/nsp1175R175CCgtTgt11AY.540.000095
ORF1ab/nsp1175R175CCgtTgt11AY.700.000209
ORF1ab/nsp1175R175CCgtTgt11AY.75.10.00018
ORF1ab/nsp1175R175CCgtTgt11AY.760.004831
ORF1ab/nsp1175R175CCgtTgt11AY.800.001129
ORF1ab/nsp1175R175CCgtTgt11AY.870.000833
ORF1ab/nsp1175R175CCgtTgt11AY.930.000273
ORF1ab/nsp1175R175CCgtTgt11AY.940.000443
ORF1ab/nsp1175R175CCgtTgt11B.1.10.000018
ORF1ab/nsp1175R175CCgtTgt11B.1.1.1890.001513
ORF1ab/nsp1175R175CCgtTgt11B.1.1.2840.000107
ORF1ab/nsp1175R175CCgtTgt11B.1.1.3110.000358
ORF1ab/nsp1175R175CCgtTgt11B.1.1.3180.000302
ORF1ab/nsp1175R175CCgtTgt11B.1.1.3510.002793
ORF1ab/nsp1175R175CCgtTgt11B.1.1.630.000386
ORF1ab/nsp1175R175CCgtTgt11B.1.160.160.000929
ORF1ab/nsp1175R175CCgtTgt11B.1.177.210.000076
ORF1ab/nsp1175R175CCgtTgt11B.1.177.700.005917
ORF1ab/nsp1175R175CCgtTgt11B.1.2210.000071
ORF1ab/nsp1175R175CCgtTgt11B.1.2430.00007
ORF1ab/nsp1175R175CCgtTgt11B.1.258.170.000104
ORF1ab/nsp1175R175CCgtTgt11B.1.2930.0125
ORF1ab/nsp1175R175CCgtTgt11B.1.3560.001727
ORF1ab/nsp1175R175CCgtTgt11B.1.36.180.00042
ORF1ab/nsp1175R175CCgtTgt11B.1.3720.010989
ORF1ab/nsp1175R175CCgtTgt11B.1.4230.010204
ORF1ab/nsp1175R175CCgtTgt11B.1.4270.00005
ORF1ab/nsp1175R175CCgtTgt11B.1.5870.001898
ORF1ab/nsp1175R175CCgtTgt11B.1.6090.000479
ORF1ab/nsp1175R175CCgtTgt11B.1.6120.002653
ORF1ab/nsp1175R175CCgtTgt11B.1.619.10.000641
ORF1ab/nsp1175R175CCgtTgt11B.1.621.10.000506
ORF1ab/nsp1175R175CCgtTgt11B.1.6370.000073
ORF1ab/nsp1175R175CCgtTgt11B.580.010204
ORF1ab/nsp1175R175CCgtTgt11D.20.000075
ORF1ab/nsp1175R175CCgtTgt11P.1.170.000162
ORF1ab/nsp1175R175CCgtTgt11P.1.70.000319
ORF1ab/nsp1175R175CCgtTgt11Q.30.000145