CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 175 & Codon = Agt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1175R175SR175SnonsynCgtAgt26261788-790

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1175R175SCgtAgt2626All0.000005
ORF1ab/nsp1175R175SCgtAgt88AY.40.000012
ORF1ab/nsp1175R175SCgtAgt44AY.390.000099
ORF1ab/nsp1175R175SCgtAgt33AY.440.000018
ORF1ab/nsp1175R175SCgtAgt33B.1.1.70.000003
ORF1ab/nsp1175R175SCgtAgt22B.10.000018
ORF1ab/nsp1175R175SCgtAgt11AY.10.000396
ORF1ab/nsp1175R175SCgtAgt11AY.250.000006
ORF1ab/nsp1175R175SCgtAgt11AY.3.10.000085
ORF1ab/nsp1175R175SCgtAgt11B.1.1.5190.00004
ORF1ab/nsp1175R175SCgtAgt11B.1.3620.001541
ORF1ab/nsp1175R175SCgtAgt11B.1.617.20.000004