CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 16 & Codon = cCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp116L16PL16PnonsyncTccCc61600.983607311-313

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp116L16PcTccCc6061All0.000011
ORF1ab/nsp116L16PcTccCc1111AY.40.000017
ORF1ab/nsp116L16PcTccCc88B.1.1.70.000007
ORF1ab/nsp116L16PcTccCc55B.10.000046
ORF1ab/nsp116L16PcTccCc44AY.1190.000141
ORF1ab/nsp116L16PcTccCc44AY.440.000024
ORF1ab/nsp116L16PcTccCc33AY.250.000018
ORF1ab/nsp116L16PcTccCc33B.1.20.000026
ORF1ab/nsp116L16PcTccCc12B.1.1.5190.00004
ORF1ab/nsp116L16PcTccCc22B.1.617.20.000008
ORF1ab/nsp116L16PcTccCc11AY.1110.000183
ORF1ab/nsp116L16PcTccCc11AY.1200.000037
ORF1ab/nsp116L16PcTccCc11AY.23.10.000417
ORF1ab/nsp116L16PcTccCc11AY.420.00004
ORF1ab/nsp116L16PcTccCc11AY.570.000656
ORF1ab/nsp116L16PcTccCc11AY.790.001211
ORF1ab/nsp116L16PcTccCc11AY.860.00083
ORF1ab/nsp116L16PcTccCc11AY.9.20.000037
ORF1ab/nsp116L16PcTccCc11B0.000128
ORF1ab/nsp116L16PcTccCc11B.1.10.000018
ORF1ab/nsp116L16PcTccCc11B.1.1.2000.007463
ORF1ab/nsp116L16PcTccCc11B.1.1.4340.000349
ORF1ab/nsp116L16PcTccCc11B.1.3510.00003
ORF1ab/nsp116L16PcTccCc11B.1.3660.004878
ORF1ab/nsp116L16PcTccCc11B.1.4680.005714
ORF1ab/nsp116L16PcTccCc11B.1.5260.000024
ORF1ab/nsp116L16PcTccCc11B.6.60.000889
ORF1ab/nsp116L16PcTccCc11C.360.000911
ORF1ab/nsp116L16PcTccCc11P.10.000016