CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 156

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1156D156DD156DsyngaTgaC1148491148491731-733
ORF1ab/nsp1156D156ND156NnonsynGatAat3723600.967742731-733
ORF1ab/nsp1156D156ND156NnonsynGaTAaC372120.0322581731-733
ORF1ab/nsp1156D156GD156GnonsyngAtgGt2192180.995434731-733
ORF1ab/nsp1156D156GD156GnonsyngATgGC21910.00456621731-733
ORF1ab/nsp1156D156YD156YnonsynGatTat1511480.980132731-733
ORF1ab/nsp1156D156YD156YnonsynGaTTaC15130.0198676731-733
ORF1ab/nsp1156D156delD156deldelGAT---79791731-733
ORF1ab/nsp1156D156ED156EnonsyngaTgaG55470.854545731-733
ORF1ab/nsp1156D156ED156EnonsyngaTgaA5580.145455731-733
ORF1ab/nsp1156D156AD156AnonsyngAtgCt45440.977778731-733
ORF1ab/nsp1156D156AD156AnonsyngATgCC4510.0222222731-733
ORF1ab/nsp1156D156VD156VnonsyngAtgTt14141731-733
ORF1ab/nsp1156D156HD156HnonsynGatCat11100.909091731-733
ORF1ab/nsp1156D156HD156HnonsynGaTCaC1110.0909091731-733
ORF1ab/nsp1156D156del1D156del1delgaTga-860.75731-733
ORF1ab/nsp1156D156del1D156del1delGat-at820.25731-733
ORF1ab/nsp1156D156RD156RnonsynGAtCGt221731-733
ORF1ab/nsp1156D156PD156PnonsynGAtCCt210.5731-733
ORF1ab/nsp1156D156SD156SnonsynGAtTCt210.5731-733
ORF1ab/nsp1156D156SD156SnonsynGATTCC210.5731-733
ORF1ab/nsp1156D156PD156PnonsynGATCCC210.5731-733

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1156D156DgaTgaC114849114849All0.021966
ORF1ab/nsp1156D156DgaTgaC6286662866P.10.99039
ORF1ab/nsp1156D156DgaTgaC2087720877P.1.140.997945
ORF1ab/nsp1156D156DgaTgaC61586158P.1.170.996118
ORF1ab/nsp1156D156DgaTgaC42714271P.1.150.992333
ORF1ab/nsp1156D156DgaTgaC36983698P.1.100.996497
ORF1ab/nsp1156D156DgaTgaC31173117P.1.70.995211
ORF1ab/nsp1156D156DgaTgaC30643064P.1.10.973316
ORF1ab/nsp1156D156DgaTgaC26012601P.1.160.973064
ORF1ab/nsp1156D156DgaTgaC19441944P.1.120.940949
ORF1ab/nsp1156D156DgaTgaC11431143P.1.17.11
ORF1ab/nsp1156D156DgaTgaC11011101P.1.130.989218
ORF1ab/nsp1156D156DgaTgaC10231023P.1.40.999023
ORF1ab/nsp1156D156DgaTgaC864864P.1.20.998844
ORF1ab/nsp1156D156DgaTgaC513513P.1.60.998054
ORF1ab/nsp1156D156NGatAat360372All0.000069
ORF1ab/nsp1156D156NGaTAaC12372All0.000002
ORF1ab/nsp1156D156GgAtgGt218219All0.000042
ORF1ab/nsp1156D156GgATgGC1219All0
ORF1ab/nsp1156D156DgaTgaC209209P.1.81
ORF1ab/nsp1156D156DgaTgaC207207P.1.90.995192
ORF1ab/nsp1156D156NGatAat195195AY.440.001187
ORF1ab/nsp1156D156DgaTgaC164164AY.40.000255
ORF1ab/nsp1156D156YGatTat148151All0.000028
ORF1ab/nsp1156D156YGaTTaC3151All0.000001
ORF1ab/nsp1156D156GgAtgGt126126B.1.1.70.000113
ORF1ab/nsp1156D156DgaTgaC114114P.1.10.10.926829
ORF1ab/nsp1156D156DgaTgaC104104B.10.000953
ORF1ab/nsp1156D156DgaTgaC9898P.1.111
ORF1ab/nsp1156D156DgaTgaC9595B.1.10.001723
ORF1ab/nsp1156D156delGAT---7979All0.000015
ORF1ab/nsp1156D156YGatTat6969AY.40.000107
ORF1ab/nsp1156D156DgaTgaC6060B.1.1.70.000054
ORF1ab/nsp1156D156EgaTgaG4755All0.000009
ORF1ab/nsp1156D156EgaTgaA855All0.000002
ORF1ab/nsp1156D156AgAtgCt4445All0.000008
ORF1ab/nsp1156D156AgATgCC145All0
ORF1ab/nsp1156D156DgaTgaC4141AY.1030.000255
ORF1ab/nsp1156D156DgaTgaC3838AY.430.000168
ORF1ab/nsp1156D156DgaTgaC3535B.1.617.20.000132
ORF1ab/nsp1156D156DgaTgaC3434AY.440.000207
ORF1ab/nsp1156D156DgaTgaC3333C.370.00383
ORF1ab/nsp1156D156DgaTgaC2929P.1.31
ORF1ab/nsp1156D156DgaTgaC2424P.1.10.21
ORF1ab/nsp1156D156YGatTat2323AY.4.50.002472
ORF1ab/nsp1156D156DgaTgaC2222AY.60.000905
ORF1ab/nsp1156D156DgaTgaC2121B.1.5960.00183
ORF1ab/nsp1156D156DgaTgaC1818B.1.1.280.005602
ORF1ab/nsp1156D156NGatAat1717AY.40.000026
ORF1ab/nsp1156D156delGAT---1717B.1.1.70.000015
ORF1ab/nsp1156D156NGatAat1717B.1.5260.0004
ORF1ab/nsp1156D156GgAtgGt1515AY.40.000023
ORF1ab/nsp1156D156VgAtgTt1414All0.000003
ORF1ab/nsp1156D156GgAtgGt1414AY.1030.000087
ORF1ab/nsp1156D156DgaTgaC1414B.1.1600.000437
ORF1ab/nsp1156D156DgaTgaC1313B.1.1.5280.0625
ORF1ab/nsp1156D156NGatAat1313B.1.1.70.000012
ORF1ab/nsp1156D156DgaTgaC1313P.1.51
ORF1ab/nsp1156D156NGatAat1212AY.1030.000075
ORF1ab/nsp1156D156YGatTat1212AY.4.20.00026
ORF1ab/nsp1156D156EgaTgaG1212AY.9.10.001005
ORF1ab/nsp1156D156AgAtgCt1212B.1.177.510.054795
ORF1ab/nsp1156D156HGatCat1011All0.000002
ORF1ab/nsp1156D156HGaTCaC111All0
ORF1ab/nsp1156D156NGatAat1111B.1.258.170.001144
ORF1ab/nsp1156D156DgaTgaC1010A.2.50.00499
ORF1ab/nsp1156D156NGatAat1010B.1.10.000181
ORF1ab/nsp1156D156DgaTgaC1010B.1.1.3060.004384
ORF1ab/nsp1156D156EgaTgaG1010B.1.617.20.000038
ORF1ab/nsp1156D156DgaTgaC99AY.1190.000318
ORF1ab/nsp1156D156NGaTAaC99P.10.000142
ORF1ab/nsp1156D156del1gaTga-68All0.000001
ORF1ab/nsp1156D156del1Gat-at28All0
ORF1ab/nsp1156D156DgaTgaC88AY.720.010884
ORF1ab/nsp1156D156NGatAat88B.1.5990.029197
ORF1ab/nsp1156D156DgaTgaC88C.37.10.020942
ORF1ab/nsp1156D156DgaTgaC88Q.10.001011
ORF1ab/nsp1156D156EgaTgaG77AY.1200.00026
ORF1ab/nsp1156D156DgaTgaC77AY.390.000173
ORF1ab/nsp1156D156GgAtgGt77AY.430.000031
ORF1ab/nsp1156D156NGatAat77B.1.20.000062
ORF1ab/nsp1156D156DgaTgaC77B.1.4270.000353
ORF1ab/nsp1156D156AgAtgCt67B.1.617.20.000023
ORF1ab/nsp1156D156AgATgCC17B.1.617.20.000004
ORF1ab/nsp1156D156DgaTgaC66AY.250.000036
ORF1ab/nsp1156D156delGAT---66AY.40.000009
ORF1ab/nsp1156D156VgAtgTt66AY.60.000247
ORF1ab/nsp1156D156delGAT---66B0.000767
ORF1ab/nsp1156D156YGatTat66B.1.1.70.000005
ORF1ab/nsp1156D156GgAtgGt66B.1.1600.000187
ORF1ab/nsp1156D156delGAT---66B.1.617.20.000023
ORF1ab/nsp1156D156DgaTgaC66B.1.6370.000438
ORF1ab/nsp1156D156GgAtgGt55AY.1200.000186
ORF1ab/nsp1156D156EgaTgaG55AY.30.00005
ORF1ab/nsp1156D156AgAtgCt55AY.330.000334
ORF1ab/nsp1156D156delGAT---55AY.430.000022
ORF1ab/nsp1156D156YGatTat55AY.90.000338
ORF1ab/nsp1156D156DgaTgaC55B.1.1.5070.043478
ORF1ab/nsp1156D156NGatAat55B.1.2580.000333
ORF1ab/nsp1156D156DgaTgaC55B.1.5260.000118
ORF1ab/nsp1156D156DgaTgaC55P.20.000933
ORF1ab/nsp1156D156DgaTgaC55Q.80.000825
ORF1ab/nsp1156D156NGatAat44AY.200.000155
ORF1ab/nsp1156D156EgaTgaA44AY.4.20.000087
ORF1ab/nsp1156D156GgAtgGt44AY.440.000024
ORF1ab/nsp1156D156YGatTat44AY.80.002424
ORF1ab/nsp1156D156DgaTgaC44B0.000511
ORF1ab/nsp1156D156YGatTat44B.10.000037
ORF1ab/nsp1156D156delGAT---44B.1.1.330.001684
ORF1ab/nsp1156D156delGAT---44B.1.1.3480.003185
ORF1ab/nsp1156D156NGatAat44B.1.1.5190.000159
ORF1ab/nsp1156D156AgAtgCt44B.1.1.70.000004
ORF1ab/nsp1156D156EgaTgaG34B.1.1.70.000003
ORF1ab/nsp1156D156EgaTgaA14B.1.1.70.000001
ORF1ab/nsp1156D156NGatAat44B.1.2210.000284
ORF1ab/nsp1156D156DgaTgaC44B.1.3490.002859
ORF1ab/nsp1156D156NGaTAaC34B.1.5960.000261
ORF1ab/nsp1156D156NGatAat14B.1.5960.000087
ORF1ab/nsp1156D156NGatAat44B.1.617.20.000015
ORF1ab/nsp1156D156HGatCat34B.1.617.20.000011
ORF1ab/nsp1156D156HGaTCaC14B.1.617.20.000004
ORF1ab/nsp1156D156DgaTgaC44B.1.6210.000354
ORF1ab/nsp1156D156NGatAat33AY.1020.00008
ORF1ab/nsp1156D156EgaTgaG33AY.1020.00008
ORF1ab/nsp1156D156YGatTat33AY.1030.000019
ORF1ab/nsp1156D156AgAtgCt33AY.1030.000019
ORF1ab/nsp1156D156DgaTgaC33AY.230.000209
ORF1ab/nsp1156D156GgAtgGt33AY.290.000047
ORF1ab/nsp1156D156AgAtgCt33AY.30.00003
ORF1ab/nsp1156D156DgaTgaC33AY.30.00003
ORF1ab/nsp1156D156DgaTgaC33AY.330.0002
ORF1ab/nsp1156D156GgAtgGt33AY.340.000291
ORF1ab/nsp1156D156DgaTgaC33AY.50.000062
ORF1ab/nsp1156D156DgaTgaC33AY.75.10.000541
ORF1ab/nsp1156D156DgaTgaC33AY.99.20.000276
ORF1ab/nsp1156D156delGAT---33B.10.000027
ORF1ab/nsp1156D156DgaTgaC33B.1.1.3720.002066
ORF1ab/nsp1156D156DgaTgaC33B.1.1.4090.008499
ORF1ab/nsp1156D156delGAT---33B.1.1.4130.02069
ORF1ab/nsp1156D156DgaTgaC33B.1.1.5190.000119
ORF1ab/nsp1156D156NGatAat33B.1.1770.00004
ORF1ab/nsp1156D156DgaTgaC33B.1.20.000026
ORF1ab/nsp1156D156DgaTgaC33B.1.2430.000209
ORF1ab/nsp1156D156GgAtgGt33B.1.2430.000209
ORF1ab/nsp1156D156DgaTgaC33B.1.3110.000824
ORF1ab/nsp1156D156GgAtgGt33B.1.5260.000071
ORF1ab/nsp1156D156YGatTat23B.1.617.20.000008
ORF1ab/nsp1156D156YGaTTaC13B.1.617.20.000004
ORF1ab/nsp1156D156RGAtCGt22All0
ORF1ab/nsp1156D156SGAtTCt12All0
ORF1ab/nsp1156D156SGATTCC12All0
ORF1ab/nsp1156D156PGAtCCt12All0
ORF1ab/nsp1156D156PGATCCC12All0
ORF1ab/nsp1156D156DgaTgaC22AY.1000.000092
ORF1ab/nsp1156D156DgaTgaC22AY.1020.000053
ORF1ab/nsp1156D156DgaTgaC22AY.1170.000169
ORF1ab/nsp1156D156DgaTgaC22AY.1180.000125
ORF1ab/nsp1156D156YGatTat22AY.1200.000074
ORF1ab/nsp1156D156GgAtgGt22AY.120.10.000642
ORF1ab/nsp1156D156GgAtgGt22AY.200.000078
ORF1ab/nsp1156D156GgAtgGt22AY.30.00002
ORF1ab/nsp1156D156DgaTgaC22AY.300.000791
ORF1ab/nsp1156D156NGatAat22AY.330.000134
ORF1ab/nsp1156D156delGAT---22AY.350.000466
ORF1ab/nsp1156D156GgAtgGt22AY.390.000049
ORF1ab/nsp1156D156GgAtgGt22AY.4.20.000043
ORF1ab/nsp1156D156DgaTgaC22AY.420.00008
ORF1ab/nsp1156D156NGatAat22AY.430.000009
ORF1ab/nsp1156D156del1gaTga-22AY.440.000012
ORF1ab/nsp1156D156AgAtgCt22AY.440.000012
ORF1ab/nsp1156D156DgaTgaC22AY.46.20.001271
ORF1ab/nsp1156D156NGatAat22AY.46.60.000144
ORF1ab/nsp1156D156DgaTgaC22AY.470.000062
ORF1ab/nsp1156D156NGatAat22AY.50.000041
ORF1ab/nsp1156D156YGatTat22AY.580.001815
ORF1ab/nsp1156D156DgaTgaC22AY.750.000112
ORF1ab/nsp1156D156GgAtgGt22AY.75.10.000361
ORF1ab/nsp1156D156NGatAat22B.10.000018
ORF1ab/nsp1156D156DgaTgaC22B.1.1.3120.003824
ORF1ab/nsp1156D156HGatCat22B.1.1.70.000002
ORF1ab/nsp1156D156DgaTgaC22B.1.1770.000026
ORF1ab/nsp1156D156AgAtgCt22B.1.1770.000026
ORF1ab/nsp1156D156DgaTgaC22B.1.177.70.00033
ORF1ab/nsp1156D156DgaTgaC22B.1.1790.007519
ORF1ab/nsp1156D156NGatAat22B.1.3110.000549
ORF1ab/nsp1156D156DgaTgaC22B.1.360.000292
ORF1ab/nsp1156D156DgaTgaC22B.1.4290.000047
ORF1ab/nsp1156D156YGatTat22B.1.4290.000047
ORF1ab/nsp1156D156NGatAat22B.1.4600.035714
ORF1ab/nsp1156D156GgAtgGt22B.1.617.20.000008
ORF1ab/nsp1156D156SGAtTCt12B.1.617.20.000004
ORF1ab/nsp1156D156PGATCCC12B.1.617.20.000004
ORF1ab/nsp1156D156PGAtCCt12B.1.617.20.000004
ORF1ab/nsp1156D156SGATTCC12B.1.617.20.000004
ORF1ab/nsp1156D156DgaTgaC22B.1.6230.001073
ORF1ab/nsp1156D156DgaTgaC22B.1.6280.000705
ORF1ab/nsp1156D156DgaTgaC22B.1.6360.013423
ORF1ab/nsp1156D156NGatAat22B.1.6370.000146
ORF1ab/nsp1156D156NGatAat22C.10.004785
ORF1ab/nsp1156D156delGAT---22N.40.008511
ORF1ab/nsp1156D156delGAT---22N.60.014184
ORF1ab/nsp1156D156delGAT---22P.20.000373
ORF1ab/nsp1156D156GgATgGC11A0.000387
ORF1ab/nsp1156D156DgaTgaC11AY.100.00053
ORF1ab/nsp1156D156AgAtgCt11AY.1020.000027
ORF1ab/nsp1156D156YGatTat11AY.1070.000466
ORF1ab/nsp1156D156NGatAat11AY.1110.000183
ORF1ab/nsp1156D156GgAtgGt11AY.1130.000142
ORF1ab/nsp1156D156delGAT---11AY.1160.000287
ORF1ab/nsp1156D156AgAtgCt11AY.1190.000035
ORF1ab/nsp1156D156NGatAat11AY.1190.000035
ORF1ab/nsp1156D156VgAtgTt11AY.1190.000035
ORF1ab/nsp1156D156delGAT---11AY.120.000316
ORF1ab/nsp1156D156NGatAat11AY.1210.000135
ORF1ab/nsp1156D156DgaTgaC11AY.130.000161
ORF1ab/nsp1156D156DgaTgaC11AY.140.000088
ORF1ab/nsp1156D156YGatTat11AY.170.008197
ORF1ab/nsp1156D156DgaTgaC11AY.20.000356
ORF1ab/nsp1156D156DgaTgaC11AY.200.000039
ORF1ab/nsp1156D156RGAtCGt11AY.230.00007
ORF1ab/nsp1156D156NGatAat11AY.230.00007
ORF1ab/nsp1156D156EgaTgaG11AY.250.000006
ORF1ab/nsp1156D156NGatAat11AY.250.000006
ORF1ab/nsp1156D156delGAT---11AY.250.000006
ORF1ab/nsp1156D156VgAtgTt11AY.260.000028
ORF1ab/nsp1156D156DgaTgaC11AY.260.000028
ORF1ab/nsp1156D156YGatTat11AY.290.000016
ORF1ab/nsp1156D156NGatAat11AY.290.000016
ORF1ab/nsp1156D156NGatAat11AY.30.00001
ORF1ab/nsp1156D156NGatAat11AY.340.000097
ORF1ab/nsp1156D156AgAtgCt11AY.360.000148
ORF1ab/nsp1156D156YGatTat11AY.370.000316
ORF1ab/nsp1156D156delGAT---11AY.380.000499
ORF1ab/nsp1156D156NGatAat11AY.390.000025
ORF1ab/nsp1156D156EgaTgaG11AY.40.000002
ORF1ab/nsp1156D156DgaTgaC11AY.4.40.000409
ORF1ab/nsp1156D156delGAT---11AY.4.50.000107
ORF1ab/nsp1156D156VgAtgTt11AY.420.00004
ORF1ab/nsp1156D156GgAtgGt11AY.420.00004
ORF1ab/nsp1156D156YGatTat11AY.430.000004
ORF1ab/nsp1156D156EgaTgaG11AY.430.000004
ORF1ab/nsp1156D156HGatCat11AY.430.000004
ORF1ab/nsp1156D156EgaTgaA11AY.440.000006
ORF1ab/nsp1156D156YGatTat11AY.440.000006
ORF1ab/nsp1156D156DgaTgaC11AY.450.000122
ORF1ab/nsp1156D156delGAT---11AY.460.000104
ORF1ab/nsp1156D156GgAtgGt11AY.46.40.000165
ORF1ab/nsp1156D156GgAtgGt11AY.46.60.000072
ORF1ab/nsp1156D156VgAtgTt11AY.470.000031
ORF1ab/nsp1156D156GgAtgGt11AY.470.000031
ORF1ab/nsp1156D156EgaTgaG11AY.50.000021
ORF1ab/nsp1156D156GgAtgGt11AY.50.000021
ORF1ab/nsp1156D156GgAtgGt11AY.5.30.000337
ORF1ab/nsp1156D156DgaTgaC11AY.540.000095
ORF1ab/nsp1156D156DgaTgaC11AY.590.00053
ORF1ab/nsp1156D156RGAtCGt11AY.610.000105
ORF1ab/nsp1156D156GgAtgGt11AY.740.000116
ORF1ab/nsp1156D156NGatAat11AY.750.000056
ORF1ab/nsp1156D156delGAT---11AY.75.10.00018
ORF1ab/nsp1156D156DgaTgaC11AY.790.001211
ORF1ab/nsp1156D156delGAT---11AY.860.00083
ORF1ab/nsp1156D156YGatTat11AY.870.000833
ORF1ab/nsp1156D156EgaTgaG11AY.90.000068
ORF1ab/nsp1156D156GgAtgGt11AY.90.000068
ORF1ab/nsp1156D156delGAT---11AY.9.10.000084
ORF1ab/nsp1156D156delGAT---11AY.950.000761
ORF1ab/nsp1156D156AgAtgCt11AY.950.000761
ORF1ab/nsp1156D156DgaTgaC11AY.950.000761
ORF1ab/nsp1156D156NGatAat11AY.980.000079
ORF1ab/nsp1156D156NGatAat11AY.98.10.000048
ORF1ab/nsp1156D156GgAtgGt11AY.99.20.000092
ORF1ab/nsp1156D156HGatCat11B0.000128
ORF1ab/nsp1156D156NGatAat11B0.000128
ORF1ab/nsp1156D156del1gaTga-11B.10.000009
ORF1ab/nsp1156D156HGatCat11B.10.000009
ORF1ab/nsp1156D156AgAtgCt11B.1.10.000018
ORF1ab/nsp1156D156GgAtgGt11B.1.10.000018
ORF1ab/nsp1156D156DgaTgaC11B.1.1.10.000327
ORF1ab/nsp1156D156DgaTgaC11B.1.1.100.001115
ORF1ab/nsp1156D156DgaTgaC11B.1.1.1610.003534
ORF1ab/nsp1156D156NGatAat11B.1.1.2160.00089
ORF1ab/nsp1156D156DgaTgaC11B.1.1.2200.001859
ORF1ab/nsp1156D156del1Gat-at11B.1.1.3060.000438
ORF1ab/nsp1156D156NGatAat11B.1.1.4320.001266
ORF1ab/nsp1156D156NGatAat11B.1.1.4480.002033
ORF1ab/nsp1156D156YGatTat11B.1.1.470.005348
ORF1ab/nsp1156D156AgAtgCt11B.1.1.5190.00004
ORF1ab/nsp1156D156DgaTgaC11B.1.1.540.003021
ORF1ab/nsp1156D156VgAtgTt11B.1.1.700.000341
ORF1ab/nsp1156D156EgaTgaA11B.1.1260.001276
ORF1ab/nsp1156D156NGatAat11B.1.1600.000031
ORF1ab/nsp1156D156YGatTat11B.1.160.160.000929
ORF1ab/nsp1156D156delGAT---11B.1.160.70.002079
ORF1ab/nsp1156D156HGatCat11B.1.1770.000013
ORF1ab/nsp1156D156delGAT---11B.1.1770.000013
ORF1ab/nsp1156D156DgaTgaC11B.1.177.40.000211
ORF1ab/nsp1156D156NGatAat11B.1.177.620.001192
ORF1ab/nsp1156D156EgaTgaG11B.1.20.000009
ORF1ab/nsp1156D156VgAtgTt11B.1.20.000009
ORF1ab/nsp1156D156del1gaTga-11B.1.20.000009
ORF1ab/nsp1156D156GgAtgGt11B.1.20.000009
ORF1ab/nsp1156D156YGatTat11B.1.20.000009
ORF1ab/nsp1156D156DgaTgaC11B.1.2140.003663
ORF1ab/nsp1156D156DgaTgaC11B.1.214.20.0006
ORF1ab/nsp1156D156DgaTgaC11B.1.2210.000071
ORF1ab/nsp1156D156GgAtgGt11B.1.2400.000216
ORF1ab/nsp1156D156DgaTgaC11B.1.2580.000067
ORF1ab/nsp1156D156YGatTat11B.1.2580.000067
ORF1ab/nsp1156D156del1Gat-at11B.1.3250.006897
ORF1ab/nsp1156D156DgaTgaC11B.1.3510.00003
ORF1ab/nsp1156D156delGAT---11B.1.360.000146
ORF1ab/nsp1156D156YGatTat11B.1.36.390.002217
ORF1ab/nsp1156D156DgaTgaC11B.1.3690.000285
ORF1ab/nsp1156D156GgAtgGt11B.1.3690.000285
ORF1ab/nsp1156D156DgaTgaC11B.1.4150.014286
ORF1ab/nsp1156D156HGatCat11B.1.4230.010204
ORF1ab/nsp1156D156delGAT---11B.1.4270.00005
ORF1ab/nsp1156D156delGAT---11B.1.4290.000024
ORF1ab/nsp1156D156NGatAat11B.1.4290.000024
ORF1ab/nsp1156D156del1gaTga-11B.1.4290.000024
ORF1ab/nsp1156D156YGatTat11B.1.4590.004082
ORF1ab/nsp1156D156NGatAat11B.1.4970.000315
ORF1ab/nsp1156D156DgaTgaC11B.1.5280.047619
ORF1ab/nsp1156D156DgaTgaC11B.1.5330.009615
ORF1ab/nsp1156D156DgaTgaC11B.1.5380.008065
ORF1ab/nsp1156D156VgAtgTt11B.1.5600.00463
ORF1ab/nsp1156D156DgaTgaC11B.1.5650.00081
ORF1ab/nsp1156D156YGatTat11B.1.5990.00365
ORF1ab/nsp1156D156DgaTgaC11B.1.6090.000479
ORF1ab/nsp1156D156NGatAat11B.1.617.10.000129
ORF1ab/nsp1156D156DgaTgaC11B.1.6200.000946
ORF1ab/nsp1156D156NGatAat11B.1.6210.000089
ORF1ab/nsp1156D156DgaTgaC11B.1.6270.00202
ORF1ab/nsp1156D156delGAT---11B.1.6380.052632
ORF1ab/nsp1156D156VgAtgTt11B.110.005128
ORF1ab/nsp1156D156GgAtgGt11B.30.000831
ORF1ab/nsp1156D156delGAT---11C.350.000774
ORF1ab/nsp1156D156AgAtgCt11C.370.000116
ORF1ab/nsp1156D156DgaTgaC11C.390.018868
ORF1ab/nsp1156D156DgaTgaC11D.20.000075
ORF1ab/nsp1156D156EgaTgaG11D.20.000075
ORF1ab/nsp1156D156NGatAat11D.20.000075
ORF1ab/nsp1156D156DgaTgaC11N.40.004255
ORF1ab/nsp1156D156DgaTgaC11N.60.007092
ORF1ab/nsp1156D156DgaTgaC11N.90.005952
ORF1ab/nsp1156D156YGaTTaC11P.10.000016
ORF1ab/nsp1156D156EgaTgaA11P.10.000016
ORF1ab/nsp1156D156YGaTTaC11P.1.170.000162
ORF1ab/nsp1156D156DgaTgaC11P.30.001595
ORF1ab/nsp1156D156DgaTgaC11P.40.003802
ORF1ab/nsp1156D156DgaTgaC11P.70.004367
ORF1ab/nsp1156D156NGatAat11Q.10.000126
ORF1ab/nsp1156D156del1gaTga-11Q.30.000145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.