CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp1 | 151 | T151T | T151T | syn | acT | acC | 1577 | 1458 | 0.92454 | 716-718 |
ORF1ab/nsp1 | 151 | T151T | T151T | syn | acT | acA | 1577 | 71 | 0.0450222 | 716-718 |
ORF1ab/nsp1 | 151 | T151T | T151T | syn | acT | acG | 1577 | 48 | 0.0304375 | 716-718 |
ORF1ab/nsp1 | 151 | T151I | T151I | nonsyn | aCt | aTt | 247 | 241 | 0.975708 | 716-718 |
ORF1ab/nsp1 | 151 | T151I | T151I | nonsyn | aCT | aTA | 247 | 4 | 0.0161943 | 716-718 |
ORF1ab/nsp1 | 151 | T151I | T151I | nonsyn | aCT | aTC | 247 | 2 | 0.00809717 | 716-718 |
ORF1ab/nsp1 | 151 | T151S | T151S | nonsyn | Act | Tct | 196 | 109 | 0.556122 | 716-718 |
ORF1ab/nsp1 | 151 | T151S | T151S | nonsyn | AcT | TcA | 196 | 38 | 0.193878 | 716-718 |
ORF1ab/nsp1 | 151 | T151S | T151S | nonsyn | aCt | aGt | 196 | 31 | 0.158163 | 716-718 |
ORF1ab/nsp1 | 151 | T151S | T151S | nonsyn | AcT | TcG | 196 | 7 | 0.0357143 | 716-718 |
ORF1ab/nsp1 | 151 | T151S | T151S | nonsyn | AcT | TcC | 196 | 6 | 0.0306122 | 716-718 |
ORF1ab/nsp1 | 151 | T151S | T151S | nonsyn | aCT | aGC | 196 | 5 | 0.0255102 | 716-718 |
ORF1ab/nsp1 | 151 | T151A | T151A | nonsyn | Act | Gct | 148 | 121 | 0.817568 | 716-718 |
ORF1ab/nsp1 | 151 | T151A | T151A | nonsyn | AcT | GcA | 148 | 18 | 0.121622 | 716-718 |
ORF1ab/nsp1 | 151 | T151A | T151A | nonsyn | AcT | GcG | 148 | 7 | 0.0472973 | 716-718 |
ORF1ab/nsp1 | 151 | T151A | T151A | nonsyn | AcT | GcC | 148 | 2 | 0.0135135 | 716-718 |
ORF1ab/nsp1 | 151 | T151R | T151R | nonsyn | ACt | CGt | 63 | 20 | 0.31746 | 716-718 |
ORF1ab/nsp1 | 151 | T151R | T151R | nonsyn | aCT | aGA | 63 | 19 | 0.301587 | 716-718 |
ORF1ab/nsp1 | 151 | T151R | T151R | nonsyn | ACT | CGA | 63 | 16 | 0.253968 | 716-718 |
ORF1ab/nsp1 | 151 | T151R | T151R | nonsyn | aCT | aGG | 63 | 4 | 0.0634921 | 716-718 |
ORF1ab/nsp1 | 151 | T151R | T151R | nonsyn | ACT | CGG | 63 | 2 | 0.031746 | 716-718 |
ORF1ab/nsp1 | 151 | T151R | T151R | nonsyn | ACT | CGC | 63 | 2 | 0.031746 | 716-718 |
ORF1ab/nsp1 | 151 | T151P | T151P | nonsyn | Act | Cct | 61 | 31 | 0.508197 | 716-718 |
ORF1ab/nsp1 | 151 | T151P | T151P | nonsyn | AcT | CcA | 61 | 19 | 0.311475 | 716-718 |
ORF1ab/nsp1 | 151 | T151P | T151P | nonsyn | AcT | CcG | 61 | 8 | 0.131148 | 716-718 |
ORF1ab/nsp1 | 151 | T151P | T151P | nonsyn | AcT | CcC | 61 | 3 | 0.0491803 | 716-718 |
ORF1ab/nsp1 | 151 | T151N | T151N | nonsyn | aCt | aAt | 57 | 55 | 0.964912 | 716-718 |
ORF1ab/nsp1 | 151 | T151N | T151N | nonsyn | aCT | aAC | 57 | 2 | 0.0350877 | 716-718 |
ORF1ab/nsp1 | 151 | T151del | T151del | del | ACT | --- | 53 | 53 | 1 | 716-718 |
ORF1ab/nsp1 | 151 | T151C | T151C | nonsyn | ACt | TGt | 50 | 43 | 0.86 | 716-718 |
ORF1ab/nsp1 | 151 | T151C | T151C | nonsyn | ACT | TGC | 50 | 7 | 0.14 | 716-718 |
ORF1ab/nsp1 | 151 | T151G | T151G | nonsyn | ACt | GGt | 44 | 20 | 0.454545 | 716-718 |
ORF1ab/nsp1 | 151 | T151G | T151G | nonsyn | ACT | GGA | 44 | 17 | 0.386364 | 716-718 |
ORF1ab/nsp1 | 151 | T151G | T151G | nonsyn | ACT | GGG | 44 | 4 | 0.0909091 | 716-718 |
ORF1ab/nsp1 | 151 | T151G | T151G | nonsyn | ACT | GGC | 44 | 3 | 0.0681818 | 716-718 |
ORF1ab/nsp1 | 151 | T151X | T151X | nonsyn | ACT | TGA | 38 | 33 | 0.868421 | 716-718 |
ORF1ab/nsp1 | 151 | T151X | T151X | nonsyn | ACT | TAA | 38 | 4 | 0.105263 | 716-718 |
ORF1ab/nsp1 | 151 | T151X | T151X | nonsyn | ACT | TAG | 38 | 1 | 0.0263158 | 716-718 |
ORF1ab/nsp1 | 151 | T151L | T151L | nonsyn | ACt | CTt | 28 | 9 | 0.321429 | 716-718 |
ORF1ab/nsp1 | 151 | T151L | T151L | nonsyn | ACT | TTA | 28 | 6 | 0.214286 | 716-718 |
ORF1ab/nsp1 | 151 | T151L | T151L | nonsyn | ACT | CTG | 28 | 6 | 0.214286 | 716-718 |
ORF1ab/nsp1 | 151 | T151L | T151L | nonsyn | ACT | TTG | 28 | 4 | 0.142857 | 716-718 |
ORF1ab/nsp1 | 151 | T151L | T151L | nonsyn | ACT | CTA | 28 | 2 | 0.0714286 | 716-718 |
ORF1ab/nsp1 | 151 | T151L | T151L | nonsyn | ACT | CTC | 28 | 1 | 0.0357143 | 716-718 |
ORF1ab/nsp1 | 151 | T151F | T151F | nonsyn | ACt | TTt | 21 | 18 | 0.857143 | 716-718 |
ORF1ab/nsp1 | 151 | T151F | T151F | nonsyn | ACT | TTC | 21 | 3 | 0.142857 | 716-718 |
ORF1ab/nsp1 | 151 | T151V | T151V | nonsyn | ACt | GTt | 19 | 10 | 0.526316 | 716-718 |
ORF1ab/nsp1 | 151 | T151V | T151V | nonsyn | ACT | GTA | 19 | 5 | 0.263158 | 716-718 |
ORF1ab/nsp1 | 151 | T151V | T151V | nonsyn | ACT | GTG | 19 | 3 | 0.157895 | 716-718 |
ORF1ab/nsp1 | 151 | T151V | T151V | nonsyn | ACT | GTC | 19 | 1 | 0.0526316 | 716-718 |
ORF1ab/nsp1 | 151 | T151Y | T151Y | nonsyn | ACt | TAt | 14 | 11 | 0.785714 | 716-718 |
ORF1ab/nsp1 | 151 | T151Y | T151Y | nonsyn | ACT | TAC | 14 | 3 | 0.214286 | 716-718 |
ORF1ab/nsp1 | 151 | T151M | T151M | nonsyn | aCT | aTG | 6 | 6 | 1 | 716-718 |
ORF1ab/nsp1 | 151 | T151K | T151K | nonsyn | aCT | aAA | 6 | 5 | 0.833333 | 716-718 |
ORF1ab/nsp1 | 151 | T151K | T151K | nonsyn | aCT | aAG | 6 | 1 | 0.166667 | 716-718 |
ORF1ab/nsp1 | 151 | T151H | T151H | nonsyn | ACt | CAt | 5 | 4 | 0.8 | 716-718 |
ORF1ab/nsp1 | 151 | T151del2 | T151del2 | del | ACt | --t | 5 | 3 | 0.6 | 716-718 |
ORF1ab/nsp1 | 151 | T151H | T151H | nonsyn | ACT | CAC | 5 | 1 | 0.2 | 716-718 |
ORF1ab/nsp1 | 151 | T151del2 | T151del2 | del | aCT | a-- | 5 | 1 | 0.2 | 716-718 |
ORF1ab/nsp1 | 151 | T151del2 | T151del2 | del | ACT | --A | 5 | 1 | 0.2 | 716-718 |
ORF1ab/nsp1 | 151 | T151W | T151W | nonsyn | ACT | TGG | 4 | 4 | 1 | 716-718 |
ORF1ab/nsp1 | 151 | T151D | T151D | nonsyn | ACt | GAt | 3 | 3 | 1 | 716-718 |
ORF1ab/nsp1 | 151 | T151Q | T151Q | nonsyn | ACT | CAA | 2 | 2 | 1 | 716-718 |
ORF1ab/nsp1 | 151 | T151E | T151E | nonsyn | ACT | GAA | 1 | 1 | 1 | 716-718 |
ORF1ab/nsp1 | 151 | T151del1 | T151del1 | del | acT | ac- | 1 | 1 | 1 | 716-718 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1458 | 1577 | All | 0.000279 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 71 | 1577 | All | 0.000014 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 48 | 1577 | All | 0.000009 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1342 | 1403 | B.1.1.7 | 0.001201 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 36 | 1403 | B.1.1.7 | 0.000032 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 25 | 1403 | B.1.1.7 | 0.000022 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 241 | 247 | All | 0.000046 |
ORF1ab/nsp1 | 151 | T151I | aCT | aTA | 4 | 247 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151I | aCT | aTC | 2 | 247 | All | 0 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 109 | 196 | All | 0.000021 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcA | 38 | 196 | All | 0.000007 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 31 | 196 | All | 0.000006 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcG | 7 | 196 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcC | 6 | 196 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151S | aCT | aGC | 5 | 196 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 121 | 148 | All | 0.000023 |
ORF1ab/nsp1 | 151 | T151A | AcT | GcA | 18 | 148 | All | 0.000003 |
ORF1ab/nsp1 | 151 | T151A | AcT | GcG | 7 | 148 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151A | AcT | GcC | 2 | 148 | All | 0 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 40 | 108 | B.1.1.7 | 0.000036 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcA | 35 | 108 | B.1.1.7 | 0.000031 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 16 | 108 | B.1.1.7 | 0.000014 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcG | 7 | 108 | B.1.1.7 | 0.000006 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcC | 5 | 108 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151S | aCT | aGC | 5 | 108 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 81 | 81 | B.1.274 | 0.964286 |
ORF1ab/nsp1 | 151 | T151R | ACt | CGt | 20 | 63 | All | 0.000004 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGA | 19 | 63 | All | 0.000004 |
ORF1ab/nsp1 | 151 | T151R | ACT | CGA | 16 | 63 | All | 0.000003 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGG | 4 | 63 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151R | ACT | CGC | 2 | 63 | All | 0 |
ORF1ab/nsp1 | 151 | T151R | ACT | CGG | 2 | 63 | All | 0 |
ORF1ab/nsp1 | 151 | T151P | Act | Cct | 31 | 61 | All | 0.000006 |
ORF1ab/nsp1 | 151 | T151P | AcT | CcA | 19 | 61 | All | 0.000004 |
ORF1ab/nsp1 | 151 | T151P | AcT | CcG | 8 | 61 | All | 0.000002 |
ORF1ab/nsp1 | 151 | T151P | AcT | CcC | 3 | 61 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 55 | 57 | All | 0.000011 |
ORF1ab/nsp1 | 151 | T151N | aCT | aAC | 2 | 57 | All | 0 |
ORF1ab/nsp1 | 151 | T151R | ACt | CGt | 18 | 57 | B.1.1.7 | 0.000016 |
ORF1ab/nsp1 | 151 | T151R | ACT | CGA | 16 | 57 | B.1.1.7 | 0.000014 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGA | 15 | 57 | B.1.1.7 | 0.000013 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGG | 4 | 57 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151R | ACT | CGG | 2 | 57 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151R | ACT | CGC | 2 | 57 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151P | Act | Cct | 25 | 55 | B.1.1.7 | 0.000022 |
ORF1ab/nsp1 | 151 | T151P | AcT | CcA | 19 | 55 | B.1.1.7 | 0.000017 |
ORF1ab/nsp1 | 151 | T151P | AcT | CcG | 8 | 55 | B.1.1.7 | 0.000007 |
ORF1ab/nsp1 | 151 | T151P | AcT | CcC | 3 | 55 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 53 | 53 | All | 0.00001 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 43 | 50 | All | 0.000008 |
ORF1ab/nsp1 | 151 | T151C | ACT | TGC | 7 | 50 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 18 | 45 | B.1.1.7 | 0.000016 |
ORF1ab/nsp1 | 151 | T151A | AcT | GcA | 18 | 45 | B.1.1.7 | 0.000016 |
ORF1ab/nsp1 | 151 | T151A | AcT | GcG | 7 | 45 | B.1.1.7 | 0.000006 |
ORF1ab/nsp1 | 151 | T151A | AcT | GcC | 2 | 45 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 20 | 44 | All | 0.000004 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGA | 17 | 44 | All | 0.000003 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGG | 4 | 44 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGC | 3 | 44 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 35 | 42 | B.1.1.7 | 0.000031 |
ORF1ab/nsp1 | 151 | T151C | ACT | TGC | 7 | 42 | B.1.1.7 | 0.000006 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 41 | 41 | AY.4 | 0.000064 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 38 | 39 | B.1.617.2 | 0.000143 |
ORF1ab/nsp1 | 151 | T151I | aCT | aTC | 1 | 39 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151X | ACT | TGA | 33 | 38 | All | 0.000006 |
ORF1ab/nsp1 | 151 | T151X | ACT | TAA | 4 | 38 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151X | ACT | TAG | 1 | 38 | All | 0 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGA | 16 | 36 | B.1.1.7 | 0.000014 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 13 | 36 | B.1.1.7 | 0.000012 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGG | 4 | 36 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGC | 3 | 36 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151X | ACT | TGA | 30 | 35 | B.1.1.7 | 0.000027 |
ORF1ab/nsp1 | 151 | T151X | ACT | TAA | 4 | 35 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151X | ACT | TAG | 1 | 35 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 33 | 34 | AY.44 | 0.000201 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 34 | AY.44 | 0.000006 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 27 | 30 | B.1.1.7 | 0.000024 |
ORF1ab/nsp1 | 151 | T151I | aCT | aTA | 3 | 30 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151L | ACt | CTt | 9 | 28 | All | 0.000002 |
ORF1ab/nsp1 | 151 | T151L | ACT | TTA | 6 | 28 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151L | ACT | CTG | 6 | 28 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151L | ACT | TTG | 4 | 28 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151L | ACT | CTA | 2 | 28 | All | 0 |
ORF1ab/nsp1 | 151 | T151L | ACT | CTC | 1 | 28 | All | 0 |
ORF1ab/nsp1 | 151 | T151L | ACT | TTA | 6 | 25 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 151 | T151L | ACT | CTG | 6 | 25 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 151 | T151L | ACt | CTt | 6 | 25 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 151 | T151L | ACT | TTG | 4 | 25 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151L | ACT | CTA | 2 | 25 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151L | ACT | CTC | 1 | 25 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 22 | 22 | B.1.1.418 | 0.5 |
ORF1ab/nsp1 | 151 | T151F | ACt | TTt | 18 | 21 | All | 0.000003 |
ORF1ab/nsp1 | 151 | T151F | ACT | TTC | 3 | 21 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 20 | 20 | AY.119 | 0.000706 |
ORF1ab/nsp1 | 151 | T151V | ACt | GTt | 10 | 19 | All | 0.000002 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTA | 5 | 19 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTG | 3 | 19 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTC | 1 | 19 | All | 0 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 16 | 19 | AY.4 | 0.000025 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 3 | 19 | AY.4 | 0.000005 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 14 | 16 | B.1.1.7 | 0.000013 |
ORF1ab/nsp1 | 151 | T151N | aCT | aAC | 2 | 16 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 8 | 15 | B.1 | 0.000073 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 6 | 15 | B.1 | 0.000055 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcA | 1 | 15 | B.1 | 0.000009 |
ORF1ab/nsp1 | 151 | T151Y | ACt | TAt | 11 | 14 | All | 0.000002 |
ORF1ab/nsp1 | 151 | T151Y | ACT | TAC | 3 | 14 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 14 | 14 | AY.44 | 0.000085 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 12 | 12 | AY.30 | 0.004749 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 12 | 12 | B.1.1.7 | 0.000011 |
ORF1ab/nsp1 | 151 | T151F | ACt | TTt | 10 | 12 | B.1.1.7 | 0.000009 |
ORF1ab/nsp1 | 151 | T151V | ACt | GTt | 5 | 12 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTA | 3 | 12 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTG | 3 | 12 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151F | ACT | TTC | 2 | 12 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTC | 1 | 12 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 5 | 12 | B.1.617.2 | 0.000019 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 4 | 12 | B.1.617.2 | 0.000015 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 3 | 12 | B.1.617.2 | 0.000011 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 11 | 11 | AY.3 | 0.000109 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 11 | 11 | AY.4 | 0.000017 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 11 | 11 | AY.43 | 0.000049 |
ORF1ab/nsp1 | 151 | T151Y | ACt | TAt | 8 | 11 | B.1.1.7 | 0.000007 |
ORF1ab/nsp1 | 151 | T151Y | ACT | TAC | 3 | 11 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 7 | 11 | P.1 | 0.00011 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 4 | 11 | P.1 | 0.000063 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 9 | 10 | AY.43 | 0.00004 |
ORF1ab/nsp1 | 151 | T151I | aCT | aTC | 1 | 10 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 4 | 10 | AY.44 | 0.000024 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 4 | 10 | AY.44 | 0.000024 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 10 | AY.44 | 0.000012 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 5 | 7 | B.1.617.2 | 0.000019 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcC | 1 | 7 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 7 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151M | aCT | aTG | 6 | 6 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151K | aCT | aAA | 5 | 6 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151K | aCT | aAG | 1 | 6 | All | 0 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 6 | 6 | AY.43 | 0.000027 |
ORF1ab/nsp1 | 151 | T151M | aCT | aTG | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 151 | T151H | ACt | CAt | 4 | 5 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151del2 | ACt | --t | 3 | 5 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151del2 | aCT | a-- | 1 | 5 | All | 0 |
ORF1ab/nsp1 | 151 | T151H | ACT | CAC | 1 | 5 | All | 0 |
ORF1ab/nsp1 | 151 | T151del2 | ACT | --A | 1 | 5 | All | 0 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 2 | 5 | AY.25 | 0.000012 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 5 | AY.25 | 0.000012 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 1 | 5 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp1 | 151 | T151P | Act | Cct | 5 | 5 | B.1 | 0.000046 |
ORF1ab/nsp1 | 151 | T151F | ACt | TTt | 5 | 5 | B.1 | 0.000046 |
ORF1ab/nsp1 | 151 | T151K | aCT | aAA | 4 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151K | aCT | aAG | 1 | 5 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 4 | 4 | A.27 | 0.006623 |
ORF1ab/nsp1 | 151 | T151W | ACT | TGG | 4 | 4 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 4 | 4 | AY.34 | 0.000388 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 4 | 4 | B.1.1.348 | 0.003185 |
ORF1ab/nsp1 | 151 | T151W | ACT | TGG | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 151 | T151H | ACt | CAt | 3 | 4 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 151 | T151H | ACT | CAC | 1 | 4 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp1 | 151 | T151D | ACt | GAt | 3 | 3 | All | 0.000001 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 3 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 3 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcA | 1 | 3 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 3 | B.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151R | ACt | CGt | 2 | 3 | B.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGA | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 3 | 3 | B.1.1.222 | 0.000612 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 3 | 3 | B.1.1.519 | 0.000119 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 3 | 3 | B.1.324 | 0.004815 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp1 | 151 | T151S | AcT | TcA | 1 | 3 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 3 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 3 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151Q | ACT | CAA | 2 | 2 | All | 0 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 2 | AY.103 | 0.000006 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 2 | AY.103 | 0.000006 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp1 | 151 | T151D | ACt | GAt | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151L | ACt | CTt | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151V | ACt | GTt | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 2 | 2 | B.1.1.420 | 0.002012 |
ORF1ab/nsp1 | 151 | T151Q | ACT | CAA | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 2 | 2 | B.1.426 | 0.002018 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp1 | 151 | T151F | ACt | TTt | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151F | ACT | TTC | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 2 | D.3 | 0.011834 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | N.4 | 0.008511 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTA | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151V | ACt | GTt | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151G | ACT | GGA | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151I | aCT | aTA | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp1 | 151 | T151E | ACT | GAA | 1 | 1 | All | 0 |
ORF1ab/nsp1 | 151 | T151del1 | acT | ac- | 1 | 1 | All | 0 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp1 | 151 | T151X | ACT | TGA | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGA | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 151 | T151H | ACt | CAt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp1 | 151 | T151del2 | ACt | --t | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp1 | 151 | T151Y | ACt | TAt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 151 | T151X | ACT | TGA | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 151 | T151F | ACt | TTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp1 | 151 | T151Y | ACt | TAt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp1 | 151 | T151del2 | ACt | --t | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp1 | 151 | T151del2 | ACt | --t | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp1 | 151 | T151V | ACT | GTA | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp1 | 151 | T151V | ACt | GTt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 151 | T151P | Act | Cct | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 151 | T151L | ACt | CTt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | B.1.201 | 0.005682 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 151 | T151N | aCt | aAt | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 151 | T151T | acT | acG | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp1 | 151 | T151S | Act | Tct | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp1 | 151 | T151V | ACt | GTt | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151F | ACt | TTt | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp1 | 151 | T151X | ACT | TGA | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGA | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151C | ACt | TGt | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp1 | 151 | T151Y | ACt | TAt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151del2 | aCT | a-- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 151 | T151T | acT | acA | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp1 | 151 | T151G | ACt | GGt | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp1 | 151 | T151del | ACT | --- | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp1 | 151 | T151A | Act | Gct | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp1 | 151 | T151I | aCt | aTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp1 | 151 | T151S | aCt | aGt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151D | ACt | GAt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151E | ACT | GAA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151R | aCT | aGA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151K | aCT | aAA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 151 | T151del1 | acT | ac- | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp1 | 151 | T151T | acT | acC | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp1 | 151 | T151del2 | ACT | --A | 1 | 1 | Q.8 | 0.000165 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|