CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp1 | 150 | G150G | G150G | syn | ggC | ggT | 1592 | 1483 | 0.931533 | 713-715 |
ORF1ab/nsp1 | 150 | G150G | G150G | syn | ggC | ggA | 1592 | 61 | 0.0383166 | 713-715 |
ORF1ab/nsp1 | 150 | G150G | G150G | syn | ggC | ggG | 1592 | 48 | 0.0301508 | 713-715 |
ORF1ab/nsp1 | 150 | G150S | G150S | nonsyn | Ggc | Agc | 1160 | 1047 | 0.902586 | 713-715 |
ORF1ab/nsp1 | 150 | G150S | G150S | nonsyn | GGC | TCA | 1160 | 46 | 0.0396552 | 713-715 |
ORF1ab/nsp1 | 150 | G150S | G150S | nonsyn | GGC | TCG | 1160 | 35 | 0.0301724 | 713-715 |
ORF1ab/nsp1 | 150 | G150S | G150S | nonsyn | GGC | TCT | 1160 | 12 | 0.0103448 | 713-715 |
ORF1ab/nsp1 | 150 | G150S | G150S | nonsyn | GGc | TCc | 1160 | 12 | 0.0103448 | 713-715 |
ORF1ab/nsp1 | 150 | G150S | G150S | nonsyn | GgC | AgT | 1160 | 8 | 0.00689655 | 713-715 |
ORF1ab/nsp1 | 150 | G150C | G150C | nonsyn | Ggc | Tgc | 935 | 920 | 0.983957 | 713-715 |
ORF1ab/nsp1 | 150 | G150C | G150C | nonsyn | GgC | TgT | 935 | 15 | 0.0160428 | 713-715 |
ORF1ab/nsp1 | 150 | G150V | G150V | nonsyn | gGc | gTc | 754 | 727 | 0.964191 | 713-715 |
ORF1ab/nsp1 | 150 | G150V | G150V | nonsyn | gGC | gTG | 754 | 10 | 0.0132626 | 713-715 |
ORF1ab/nsp1 | 150 | G150V | G150V | nonsyn | gGC | gTA | 754 | 9 | 0.0119363 | 713-715 |
ORF1ab/nsp1 | 150 | G150V | G150V | nonsyn | gGC | gTT | 754 | 8 | 0.0106101 | 713-715 |
ORF1ab/nsp1 | 150 | G150D | G150D | nonsyn | gGc | gAc | 517 | 510 | 0.98646 | 713-715 |
ORF1ab/nsp1 | 150 | G150D | G150D | nonsyn | gGC | gAT | 517 | 7 | 0.0135397 | 713-715 |
ORF1ab/nsp1 | 150 | G150A | G150A | nonsyn | gGC | gCA | 115 | 41 | 0.356522 | 713-715 |
ORF1ab/nsp1 | 150 | G150A | G150A | nonsyn | gGC | gCG | 115 | 34 | 0.295652 | 713-715 |
ORF1ab/nsp1 | 150 | G150A | G150A | nonsyn | gGc | gCc | 115 | 26 | 0.226087 | 713-715 |
ORF1ab/nsp1 | 150 | G150A | G150A | nonsyn | gGC | gCT | 115 | 14 | 0.121739 | 713-715 |
ORF1ab/nsp1 | 150 | G150X | G150X | nonsyn | GgC | TgA | 70 | 55 | 0.785714 | 713-715 |
ORF1ab/nsp1 | 150 | G150X | G150X | nonsyn | GGC | TAA | 70 | 8 | 0.114286 | 713-715 |
ORF1ab/nsp1 | 150 | G150X | G150X | nonsyn | GGC | TAG | 70 | 7 | 0.1 | 713-715 |
ORF1ab/nsp1 | 150 | G150del | G150del | del | GGC | --- | 58 | 58 | 1 | 713-715 |
ORF1ab/nsp1 | 150 | G150R | G150R | nonsyn | GgC | AgA | 47 | 14 | 0.297872 | 713-715 |
ORF1ab/nsp1 | 150 | G150R | G150R | nonsyn | GgC | AgG | 47 | 12 | 0.255319 | 713-715 |
ORF1ab/nsp1 | 150 | G150R | G150R | nonsyn | Ggc | Cgc | 47 | 9 | 0.191489 | 713-715 |
ORF1ab/nsp1 | 150 | G150R | G150R | nonsyn | GgC | CgT | 47 | 6 | 0.12766 | 713-715 |
ORF1ab/nsp1 | 150 | G150R | G150R | nonsyn | GgC | CgA | 47 | 3 | 0.0638298 | 713-715 |
ORF1ab/nsp1 | 150 | G150R | G150R | nonsyn | GgC | CgG | 47 | 3 | 0.0638298 | 713-715 |
ORF1ab/nsp1 | 150 | G150W | G150W | nonsyn | GgC | TgG | 46 | 46 | 1 | 713-715 |
ORF1ab/nsp1 | 150 | G150T | G150T | nonsyn | GGC | ACA | 34 | 11 | 0.323529 | 713-715 |
ORF1ab/nsp1 | 150 | G150T | G150T | nonsyn | GGC | ACG | 34 | 10 | 0.294118 | 713-715 |
ORF1ab/nsp1 | 150 | G150T | G150T | nonsyn | GGc | ACc | 34 | 7 | 0.205882 | 713-715 |
ORF1ab/nsp1 | 150 | G150T | G150T | nonsyn | GGC | ACT | 34 | 6 | 0.176471 | 713-715 |
ORF1ab/nsp1 | 150 | G150L | G150L | nonsyn | GGC | TTG | 31 | 8 | 0.258065 | 713-715 |
ORF1ab/nsp1 | 150 | G150L | G150L | nonsyn | GGC | TTA | 31 | 8 | 0.258065 | 713-715 |
ORF1ab/nsp1 | 150 | G150L | G150L | nonsyn | GGC | CTT | 31 | 7 | 0.225806 | 713-715 |
ORF1ab/nsp1 | 150 | G150L | G150L | nonsyn | GGc | CTc | 31 | 5 | 0.16129 | 713-715 |
ORF1ab/nsp1 | 150 | G150L | G150L | nonsyn | GGC | CTG | 31 | 2 | 0.0645161 | 713-715 |
ORF1ab/nsp1 | 150 | G150L | G150L | nonsyn | GGC | CTA | 31 | 1 | 0.0322581 | 713-715 |
ORF1ab/nsp1 | 150 | G150E | G150E | nonsyn | gGC | gAA | 18 | 10 | 0.555556 | 713-715 |
ORF1ab/nsp1 | 150 | G150E | G150E | nonsyn | gGC | gAG | 18 | 8 | 0.444444 | 713-715 |
ORF1ab/nsp1 | 150 | G150F | G150F | nonsyn | GGc | TTc | 16 | 11 | 0.6875 | 713-715 |
ORF1ab/nsp1 | 150 | G150F | G150F | nonsyn | GGC | TTT | 16 | 5 | 0.3125 | 713-715 |
ORF1ab/nsp1 | 150 | G150Y | G150Y | nonsyn | GGc | TAc | 11 | 7 | 0.636364 | 713-715 |
ORF1ab/nsp1 | 150 | G150Y | G150Y | nonsyn | GGC | TAT | 11 | 4 | 0.363636 | 713-715 |
ORF1ab/nsp1 | 150 | G150N | G150N | nonsyn | GGc | AAc | 9 | 5 | 0.555556 | 713-715 |
ORF1ab/nsp1 | 150 | G150N | G150N | nonsyn | GGC | AAT | 9 | 4 | 0.444444 | 713-715 |
ORF1ab/nsp1 | 150 | G150P | G150P | nonsyn | GGC | CCA | 9 | 3 | 0.333333 | 713-715 |
ORF1ab/nsp1 | 150 | G150P | G150P | nonsyn | GGC | CCT | 9 | 3 | 0.333333 | 713-715 |
ORF1ab/nsp1 | 150 | G150I | G150I | nonsyn | GGC | ATA | 9 | 3 | 0.333333 | 713-715 |
ORF1ab/nsp1 | 150 | G150I | G150I | nonsyn | GGC | ATT | 9 | 3 | 0.333333 | 713-715 |
ORF1ab/nsp1 | 150 | G150I | G150I | nonsyn | GGc | ATc | 9 | 3 | 0.333333 | 713-715 |
ORF1ab/nsp1 | 150 | G150P | G150P | nonsyn | GGc | CCc | 9 | 2 | 0.222222 | 713-715 |
ORF1ab/nsp1 | 150 | G150P | G150P | nonsyn | GGC | CCG | 9 | 1 | 0.111111 | 713-715 |
ORF1ab/nsp1 | 150 | G150K | G150K | nonsyn | GGC | AAG | 6 | 3 | 0.5 | 713-715 |
ORF1ab/nsp1 | 150 | G150K | G150K | nonsyn | GGC | AAA | 6 | 3 | 0.5 | 713-715 |
ORF1ab/nsp1 | 150 | G150M | G150M | nonsyn | GGC | ATG | 5 | 5 | 1 | 713-715 |
ORF1ab/nsp1 | 150 | G150del1 | G150del1 | del | Ggc | -gc | 3 | 3 | 1 | 713-715 |
ORF1ab/nsp1 | 150 | G150H | G150H | nonsyn | GGc | CAc | 2 | 1 | 0.5 | 713-715 |
ORF1ab/nsp1 | 150 | G150H | G150H | nonsyn | GGC | CAT | 2 | 1 | 0.5 | 713-715 |
ORF1ab/nsp1 | 150 | G150Q | G150Q | nonsyn | GGC | CAG | 1 | 1 | 1 | 713-715 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1483 | 1592 | All | 0.000284 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 61 | 1592 | All | 0.000012 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 48 | 1592 | All | 0.000009 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1047 | 1160 | All | 0.0002 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCA | 46 | 1160 | All | 0.000009 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCG | 35 | 1160 | All | 0.000007 |
ORF1ab/nsp1 | 150 | G150S | GGc | TCc | 12 | 1160 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCT | 12 | 1160 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150S | GgC | AgT | 8 | 1160 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 920 | 935 | All | 0.000176 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 15 | 935 | All | 0.000003 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 727 | 754 | All | 0.000139 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTG | 10 | 754 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTA | 9 | 754 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTT | 8 | 754 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 510 | 517 | All | 0.000098 |
ORF1ab/nsp1 | 150 | G150D | gGC | gAT | 7 | 517 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 469 | 481 | B.1.1.7 | 0.00042 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTA | 6 | 481 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTG | 5 | 481 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTT | 1 | 481 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 367 | 367 | B.1.3 | 0.960733 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 188 | 268 | B.1.1.7 | 0.000168 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 46 | 268 | B.1.1.7 | 0.000041 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 34 | 268 | B.1.1.7 | 0.00003 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 268 | 268 | P.1 | 0.004222 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 164 | 255 | B.1.1.7 | 0.000147 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCA | 40 | 255 | B.1.1.7 | 0.000036 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCG | 31 | 255 | B.1.1.7 | 0.000028 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCT | 9 | 255 | B.1.1.7 | 0.000008 |
ORF1ab/nsp1 | 150 | G150S | GGc | TCc | 7 | 255 | B.1.1.7 | 0.000006 |
ORF1ab/nsp1 | 150 | G150S | GgC | AgT | 4 | 255 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 201 | 201 | AY.110 | 0.02265 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 154 | 154 | AY.42 | 0.006195 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 127 | 127 | AY.43 | 0.000563 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCA | 41 | 115 | All | 0.000008 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCG | 34 | 115 | All | 0.000007 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 26 | 115 | All | 0.000005 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCT | 14 | 115 | All | 0.000003 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCA | 36 | 90 | B.1.1.7 | 0.000032 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCG | 29 | 90 | B.1.1.7 | 0.000026 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 14 | 90 | B.1.1.7 | 0.000013 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCT | 11 | 90 | B.1.1.7 | 0.00001 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 85 | 86 | B.1.2 | 0.000748 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 1 | 86 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 84 | 84 | B.1.617.2 | 0.000316 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 80 | 80 | AY.4 | 0.000125 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 76 | 76 | AY.4 | 0.000118 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 71 | 71 | B.1.351 | 0.002111 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 55 | 70 | All | 0.000011 |
ORF1ab/nsp1 | 150 | G150X | GGC | TAA | 8 | 70 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150X | GGC | TAG | 7 | 70 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 60 | 68 | B.1.1.7 | 0.000054 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 8 | 68 | B.1.1.7 | 0.000007 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 55 | 66 | B.1 | 0.000504 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCA | 4 | 66 | B.1 | 0.000037 |
ORF1ab/nsp1 | 150 | G150S | GGc | TCc | 3 | 66 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCG | 2 | 66 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150S | GgC | AgT | 1 | 66 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCT | 1 | 66 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 62 | 64 | AY.4 | 0.000096 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 2 | 64 | AY.4 | 0.000003 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 62 | 62 | AA.5 | 1 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 58 | 58 | All | 0.000011 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 55 | 55 | AY.3 | 0.000547 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 44 | 55 | B.1.1.7 | 0.000039 |
ORF1ab/nsp1 | 150 | G150X | GGC | TAA | 6 | 55 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 150 | G150X | GGC | TAG | 5 | 55 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 54 | 54 | AY.25 | 0.000325 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 54 | 54 | B.1.351 | 0.001605 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 48 | 49 | B.1.617.2 | 0.000181 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 1 | 49 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 48 | 48 | AY.25 | 0.000289 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgA | 14 | 47 | All | 0.000003 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgG | 12 | 47 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 9 | 47 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgT | 6 | 47 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgA | 3 | 47 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgG | 3 | 47 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 47 | 47 | AY.4 | 0.000073 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 47 | 47 | AY.4 | 0.000073 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 46 | 46 | All | 0.000009 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 43 | 46 | B.1.1.7 | 0.000038 |
ORF1ab/nsp1 | 150 | G150D | gGC | gAT | 3 | 46 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 45 | 45 | AY.46.6 | 0.003249 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 42 | 43 | B.1.1 | 0.000762 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 1 | 43 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 41 | 41 | B.1.241 | 0.033279 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 38 | 38 | B.1.429 | 0.000894 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 37 | 37 | B.1.1.519 | 0.001469 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 36 | 37 | B.1.2 | 0.000317 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 1 | 37 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 36 | 36 | AY.103 | 0.000224 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 34 | 36 | AY.25 | 0.000205 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCA | 1 | 36 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCG | 1 | 36 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 36 | 36 | B.1.1.7 | 0.000032 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 35 | 35 | AY.44 | 0.000213 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 20 | 35 | B.1 | 0.000183 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 8 | 35 | B.1 | 0.000073 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 7 | 35 | B.1 | 0.000064 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 35 | 35 | B.1.1.63 | 0.013503 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACA | 11 | 34 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACG | 10 | 34 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150T | GGc | ACc | 7 | 34 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACT | 6 | 34 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 31 | 34 | B.1 | 0.000284 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 3 | 34 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 32 | 32 | R.1 | 0.00288 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTA | 8 | 31 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTG | 8 | 31 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTT | 7 | 31 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150L | GGc | CTc | 5 | 31 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTG | 2 | 31 | All | 0 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTA | 1 | 31 | All | 0 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACA | 10 | 29 | B.1.1.7 | 0.000009 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACG | 8 | 29 | B.1.1.7 | 0.000007 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACT | 6 | 29 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 150 | G150T | GGc | ACc | 5 | 29 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 28 | 28 | AY.29.1 | 0.006174 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 27 | 27 | P.1.6 | 0.052529 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 26 | 26 | AY.4.2 | 0.000564 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 23 | 25 | AY.25 | 0.000138 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 1 | 25 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 1 | 25 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 25 | 25 | AY.44 | 0.000152 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgA | 12 | 25 | B.1.1.7 | 0.000011 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgG | 9 | 25 | B.1.1.7 | 0.000008 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgA | 2 | 25 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgT | 1 | 25 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgG | 1 | 25 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 23 | 23 | AY.102 | 0.00061 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 23 | 23 | AY.29 | 0.000363 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 22 | 22 | AY.3 | 0.000219 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 22 | 22 | P.1 | 0.000347 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 21 | 21 | AY.43 | 0.000093 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 21 | 21 | AY.99.2 | 0.001935 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 21 | 21 | B.1.525 | 0.002376 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 17 | 19 | B.1.617.2 | 0.000064 |
ORF1ab/nsp1 | 150 | G150S | GGc | TCc | 1 | 19 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCT | 1 | 19 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150E | gGC | gAA | 10 | 18 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150E | gGC | gAG | 8 | 18 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 18 | 18 | B.1.1.207 | 0.021277 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 17 | 17 | AY.113 | 0.002421 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 11 | 16 | All | 0.000002 |
ORF1ab/nsp1 | 150 | G150F | GGC | TTT | 5 | 16 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 16 | 16 | AY.13 | 0.002576 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 7 | 16 | B.1 | 0.000064 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTT | 4 | 16 | B.1 | 0.000037 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTG | 3 | 16 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTA | 2 | 16 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 15 | 15 | AY.3 | 0.000149 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 14 | 14 | AY.103 | 0.000087 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 6 | 14 | B.1 | 0.000055 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCA | 4 | 14 | B.1 | 0.000037 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCG | 3 | 14 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCT | 1 | 14 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 14 | 14 | B.1.596 | 0.00122 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 13 | 14 | B.1.617.2 | 0.000049 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTT | 1 | 14 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 13 | 13 | AY.103 | 0.000081 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 13 | 13 | AY.26 | 0.000368 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 13 | 13 | AY.75 | 0.000728 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTG | 3 | 13 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTT | 3 | 13 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150L | GGc | CTc | 3 | 13 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTA | 2 | 13 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTA | 1 | 13 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTG | 1 | 13 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 13 | 13 | B.1.1.7 | 0.000012 |
ORF1ab/nsp1 | 150 | G150E | gGC | gAA | 7 | 13 | B.1.1.7 | 0.000006 |
ORF1ab/nsp1 | 150 | G150E | gGC | gAG | 6 | 13 | B.1.1.7 | 0.000005 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 13 | 13 | B.1.2 | 0.000114 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 12 | 12 | AY.102 | 0.000318 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 12 | 12 | AY.25 | 0.000072 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 12 | 12 | AY.29 | 0.000189 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 12 | 12 | AY.39.1 | 0.000475 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 12 | 12 | AY.9 | 0.000811 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 10 | 12 | B.1.1 | 0.000181 |
ORF1ab/nsp1 | 150 | G150S | GGc | TCc | 1 | 12 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCT | 1 | 12 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 12 | 12 | B.40 | 0.004372 |
ORF1ab/nsp1 | 150 | G150Y | GGc | TAc | 7 | 11 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150Y | GGC | TAT | 4 | 11 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 11 | 11 | AY.33 | 0.000735 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 11 | 11 | AY.90 | 0.007529 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 7 | 11 | B.1 | 0.000064 |
ORF1ab/nsp1 | 150 | G150X | GGC | TAG | 2 | 11 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150X | GGC | TAA | 2 | 11 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 11 | 11 | B.1.617.2 | 0.000041 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 10 | 10 | AY.39 | 0.000247 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 3 | 10 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgT | 3 | 10 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgG | 2 | 10 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgG | 1 | 10 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgA | 1 | 10 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 10 | 10 | B.1.623 | 0.005365 |
ORF1ab/nsp1 | 150 | G150N | GGc | AAc | 5 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150N | GGC | AAT | 4 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCA | 3 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150I | GGC | ATA | 3 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150I | GGc | ATc | 3 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCT | 3 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150I | GGC | ATT | 3 | 9 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150P | GGc | CCc | 2 | 9 | All | 0 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCG | 1 | 9 | All | 0 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 6 | 9 | AY.100 | 0.000276 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 3 | 9 | AY.100 | 0.000138 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 9 | 9 | AY.14 | 0.000792 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 9 | 9 | AY.3 | 0.00009 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTA | 5 | 9 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTG | 3 | 9 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTT | 1 | 9 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 9 | 9 | R.1 | 0.00081 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 8 | 8 | AY.43 | 0.000035 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 8 | 8 | AY.44 | 0.000049 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 5 | 8 | B.1 | 0.000046 |
ORF1ab/nsp1 | 150 | G150F | GGC | TTT | 3 | 8 | B.1 | 0.000027 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 8 | 8 | B.1.1.214 | 0.000444 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 7 | 7 | AY.23 | 0.000488 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 5 | 7 | B.1 | 0.000046 |
ORF1ab/nsp1 | 150 | G150D | gGC | gAT | 2 | 7 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 7 | 7 | B.1.258 | 0.000466 |
ORF1ab/nsp1 | 150 | G150K | GGC | AAG | 3 | 6 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150K | GGC | AAA | 3 | 6 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 6 | 6 | AU.2 | 0.014528 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 6 | 6 | AY.102 | 0.000159 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 6 | 6 | AY.99.2 | 0.000553 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp1 | 150 | G150Y | GGc | TAc | 4 | 6 | B.1 | 0.000037 |
ORF1ab/nsp1 | 150 | G150Y | GGC | TAT | 2 | 6 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 6 | 6 | B.1.240 | 0.001293 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 6 | 6 | B.1.36.36 | 0.003612 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 6 | 6 | B.40 | 0.002186 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp1 | 150 | G150M | GGC | ATG | 5 | 5 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 5 | 5 | AY.34 | 0.000485 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 5 | 5 | B.1.1.1 | 0.001633 |
ORF1ab/nsp1 | 150 | G150Y | GGc | TAc | 3 | 5 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 150 | G150I | GGC | ATA | 3 | 5 | B.1.1.7 | 0.000003 |
ORF1ab/nsp1 | 150 | G150Y | GGC | TAT | 2 | 5 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 150 | G150I | GGc | ATc | 1 | 5 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150I | GGC | ATT | 1 | 5 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 5 | 5 | B.1.177.35 | 0.003455 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 5 | 5 | B.1.232 | 0.002687 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 5 | 5 | B.1.240 | 0.001078 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 5 | 5 | B.1.420 | 0.052083 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 5 | 5 | C.37 | 0.00058 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 4 | 4 | AY.120 | 0.000149 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 3 | 4 | AY.43 | 0.000013 |
ORF1ab/nsp1 | 150 | G150S | GgC | AgT | 1 | 4 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp1 | 150 | G150E | gGC | gAG | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150E | gGC | gAA | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 4 | 4 | B.1.1.348 | 0.003185 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 4 | 4 | B.1.1.354 | 0.017544 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp1 | 150 | G150M | GGC | ATG | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCA | 2 | 4 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCT | 1 | 4 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCG | 1 | 4 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 3 | 4 | B.1.258 | 0.0002 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTT | 1 | 4 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTT | 1 | 4 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150L | GGc | CTc | 1 | 4 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTG | 1 | 4 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTG | 1 | 4 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 4 | 4 | B.1.526 | 0.000094 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 4 | P.1 | 0.000047 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 1 | 4 | P.1 | 0.000016 |
ORF1ab/nsp1 | 150 | G150del1 | Ggc | -gc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | AY.53 | 0.000863 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 3 | 3 | B | 0.000383 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCA | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCT | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150P | GGc | CCc | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 3 | 3 | B.1.1.141 | 0.006036 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | B.1.1.263 | 0.004673 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | B.1.1.411 | 0.044118 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 3 | 3 | B.1.1.442 | 0.055556 |
ORF1ab/nsp1 | 150 | G150K | GGC | AAG | 2 | 3 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 150 | G150K | GGC | AAA | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 3 | B.1.177 | 0.000026 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTG | 1 | 3 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 3 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTG | 1 | 3 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTT | 1 | 3 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgT | 1 | 3 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 1 | 3 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgG | 1 | 3 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 3 | 3 | Q.7 | 0.003333 |
ORF1ab/nsp1 | 150 | G150D | gGC | gAT | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150S | GgC | AgT | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150N | GGc | AAc | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150N | GGC | AAT | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 2 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | A.2.5.1 | 0.009615 |
ORF1ab/nsp1 | 150 | G150H | GGc | CAc | 1 | 2 | All | 0 |
ORF1ab/nsp1 | 150 | G150H | GGC | CAT | 1 | 2 | All | 0 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 2 | AU.2 | 0.004843 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCG | 1 | 2 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCA | 1 | 2 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 2 | AY.32 | 0.000532 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggA | 1 | 2 | AY.32 | 0.000532 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150N | GGc | AAc | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150H | GGC | CAT | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150H | GGc | CAc | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150I | GGC | ATT | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150I | GGc | ATc | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150N | GGC | AAT | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACG | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150T | GGc | ACc | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCT | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.1.218 | 0.015385 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | B.1.1.297 | 0.004474 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | B.1.110 | 0.00905 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | B.1.160.10 | 0.016129 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | B.1.177.6 | 0.001953 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp1 | 150 | G150D | gGC | gAT | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150I | GGC | ATT | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150I | GGc | ATc | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150N | GGc | AAc | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150S | GgC | AgT | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150N | GGC | AAT | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150C | GgC | TgT | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150F | GGC | TTT | 1 | 2 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.560 | 0.009259 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgG | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACG | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150T | GGC | ACA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150S | GGC | TCG | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150P | GGc | CCc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150P | GGC | CCT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150L | GGc | CTc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150R | GgC | CgT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150F | GGC | TTT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | N.4 | 0.008511 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp1 | 150 | G150V | gGC | gTA | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp1 | 150 | G150R | GgC | AgA | 1 | 1 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150K | GGC | AAA | 1 | 1 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150E | gGC | gAA | 1 | 1 | 0.055556 | |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AA.1 | 0.007246 |
ORF1ab/nsp1 | 150 | G150Q | GGC | CAG | 1 | 1 | All | 0 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp1 | 150 | G150N | GGc | AAc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 150 | G150del1 | Ggc | -gc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp1 | 150 | G150K | GGC | AAA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp1 | 150 | G150Q | GGC | CAG | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150M | GGC | ATG | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150K | GGC | AAG | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150del1 | Ggc | -gc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.16 | 0.055556 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.262 | 0.015152 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp1 | 150 | G150A | gGC | gCG | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.1.462 | 0.008621 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp1 | 150 | G150del1 | Ggc | -gc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150N | GGC | AAT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.160.8 | 0.001289 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTG | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggG | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp1 | 150 | G150L | GGC | CTT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.219 | 0.009434 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp1 | 150 | G150A | gGc | gCc | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.521 | 0.004975 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.572 | 0.025 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150W | GgC | TgG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp1 | 150 | G150T | GGc | ACc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | C.13 | 0.025641 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp1 | 150 | G150N | GGc | AAc | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp1 | 150 | G150R | Ggc | Cgc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp1 | 150 | G150X | GgC | TgA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 150 | G150F | GGc | TTc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 150 | G150L | GGC | TTA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | P.1.5 | 0.076923 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp1 | 150 | G150G | ggC | ggT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp1 | 150 | G150S | Ggc | Agc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp1 | 150 | G150V | gGc | gTc | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp1 | 150 | G150del | GGC | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp1 | 150 | G150C | Ggc | Tgc | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp1 | 150 | G150D | gGc | gAc | 1 | 1 | W.4 | 0.001351 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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