CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 144 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1144D144DD144DsyngaCgaT9679671695-697

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1144D144DgaCgaT967967All0.000185
ORF1ab/nsp1144D144DgaCgaT556556AY.290.00877
ORF1ab/nsp1144D144DgaCgaT9999B.1.1.70.000089
ORF1ab/nsp1144D144DgaCgaT3535AY.40.000054
ORF1ab/nsp1144D144DgaCgaT3232B.1.6270.064646
ORF1ab/nsp1144D144DgaCgaT2020B.1.617.20.000075
ORF1ab/nsp1144D144DgaCgaT1919AY.440.000116
ORF1ab/nsp1144D144DgaCgaT1818B.1.177.620.021454
ORF1ab/nsp1144D144DgaCgaT1616B.1.1.3170.006587
ORF1ab/nsp1144D144DgaCgaT1515AY.850.006408
ORF1ab/nsp1144D144DgaCgaT1212B.1.1770.000158
ORF1ab/nsp1144D144DgaCgaT1111AY.420.000443
ORF1ab/nsp1144D144DgaCgaT88AY.1030.00005
ORF1ab/nsp1144D144DgaCgaT77AY.270.000453
ORF1ab/nsp1144D144DgaCgaT77B.10.000064
ORF1ab/nsp1144D144DgaCgaT77B.1.5260.000165
ORF1ab/nsp1144D144DgaCgaT66AY.29.10.001323
ORF1ab/nsp1144D144DgaCgaT55AY.430.000022
ORF1ab/nsp1144D144DgaCgaT55B.1.10.000091
ORF1ab/nsp1144D144DgaCgaT44AY.230.000279
ORF1ab/nsp1144D144DgaCgaT44AY.250.000024
ORF1ab/nsp1144D144DgaCgaT44B.1.20.000035
ORF1ab/nsp1144D144DgaCgaT44C.300.006908
ORF1ab/nsp1144D144DgaCgaT44P.1.140.000191
ORF1ab/nsp1144D144DgaCgaT33AY.1200.000112
ORF1ab/nsp1144D144DgaCgaT33AY.390.000074
ORF1ab/nsp1144D144DgaCgaT33AY.50.000062
ORF1ab/nsp1144D144DgaCgaT33AY.580.002722
ORF1ab/nsp1144D144DgaCgaT33B.1.6370.000219
ORF1ab/nsp1144D144DgaCgaT22AD.20.000438
ORF1ab/nsp1144D144DgaCgaT22AY.1020.000053
ORF1ab/nsp1144D144DgaCgaT22AY.1100.000225
ORF1ab/nsp1144D144DgaCgaT22AY.140.000176
ORF1ab/nsp1144D144DgaCgaT22AY.60.000082
ORF1ab/nsp1144D144DgaCgaT22B0.000256
ORF1ab/nsp1144D144DgaCgaT22B.1.1.2220.000408
ORF1ab/nsp1144D144DgaCgaT22B.1.1.5190.000079
ORF1ab/nsp1144D144DgaCgaT22B.1.1600.000062
ORF1ab/nsp1144D144DgaCgaT22B.1.3400.008584
ORF1ab/nsp1144D144DgaCgaT22B.1.5960.000174
ORF1ab/nsp1144D144DgaCgaT22P.10.000032
ORF1ab/nsp1144D144DgaCgaT22P.1.150.000465
ORF1ab/nsp1144D144DgaCgaT22R.10.00018
ORF1ab/nsp1144D144DgaCgaT11AY.1130.000142
ORF1ab/nsp1144D144DgaCgaT11AY.1190.000035
ORF1ab/nsp1144D144DgaCgaT11AY.200.000039
ORF1ab/nsp1144D144DgaCgaT11AY.330.000067
ORF1ab/nsp1144D144DgaCgaT11AY.340.000097
ORF1ab/nsp1144D144DgaCgaT11AY.4.20.000022
ORF1ab/nsp1144D144DgaCgaT11AY.5.40.000277
ORF1ab/nsp1144D144DgaCgaT11AY.7.20.000559
ORF1ab/nsp1144D144DgaCgaT11B.1.1.1890.001513
ORF1ab/nsp1144D144DgaCgaT11B.1.1.2140.000055
ORF1ab/nsp1144D144DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp1144D144DgaCgaT11B.1.1.2280.003049
ORF1ab/nsp1144D144DgaCgaT11B.1.1.4090.002833
ORF1ab/nsp1144D144DgaCgaT11B.1.1730.026316
ORF1ab/nsp1144D144DgaCgaT11B.1.177.90.001332
ORF1ab/nsp1144D144DgaCgaT11B.1.258.170.000104
ORF1ab/nsp1144D144DgaCgaT11B.1.3890.001002
ORF1ab/nsp1144D144DgaCgaT11B.1.4590.004082
ORF1ab/nsp1144D144DgaCgaT11B.1.5880.00091
ORF1ab/nsp1144D144DgaCgaT11B.1.5950.000261
ORF1ab/nsp1144D144DgaCgaT11B.1.6210.000089
ORF1ab/nsp1144D144DgaCgaT11B.1.80.001972
ORF1ab/nsp1144D144DgaCgaT11C.230.005814
ORF1ab/nsp1144D144DgaCgaT11D.20.000075
ORF1ab/nsp1144D144DgaCgaT11P.1.10.000318
ORF1ab/nsp1144D144DgaCgaT11Q.30.000145