CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 144 & Codon = gaA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1144D144ED144EnonsyngaCgaA4714650.987261695-697

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1144D144EgaCgaA465471All0.000089
ORF1ab/nsp1144D144EgaCgaA368368AY.40.000573
ORF1ab/nsp1144D144EgaCgaA2424B.1.617.20.00009
ORF1ab/nsp1144D144EgaCgaA1616B.1.20.000141
ORF1ab/nsp1144D144EgaCgaA1212B.1.1.70.000011
ORF1ab/nsp1144D144EgaCgaA1111AY.440.000067
ORF1ab/nsp1144D144EgaCgaA55AY.250.00003
ORF1ab/nsp1144D144EgaCgaA45AY.430.000018
ORF1ab/nsp1144D144EgaCgaA44AY.390.000099
ORF1ab/nsp1144D144EgaCgaA33AY.9.20.00011
ORF1ab/nsp1144D144EgaCgaA12AY.230.00007
ORF1ab/nsp1144D144EgaCgaA22AY.4.2.10.000298
ORF1ab/nsp1144D144EgaCgaA22B.10.000018
ORF1ab/nsp1144D144EgaCgaA11AY.1020.000027
ORF1ab/nsp1144D144EgaCgaA11AY.1200.000037
ORF1ab/nsp1144D144EgaCgaA11AY.910.00073
ORF1ab/nsp1144D144EgaCgaA11AY.980.000079
ORF1ab/nsp1144D144EgaCgaA11AY.98.10.000048
ORF1ab/nsp1144D144EgaCgaA11B.1.1.2430.004082
ORF1ab/nsp1144D144EgaCgaA11B.1.1.3060.000438
ORF1ab/nsp1144D144EgaCgaA11B.1.177.820.000477
ORF1ab/nsp1144D144EgaCgaA11B.1.4260.001009
ORF1ab/nsp1144D144EgaCgaA11B.1.4270.00005
ORF1ab/nsp1144D144EgaCgaA11B.1.5820.000491
ORF1ab/nsp1144D144EgaCgaA11B.1.6210.000089
ORF1ab/nsp1144D144EgaCgaA11B.60.00091