CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 142 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1142S142AS142AnonsynTcaGca50480.96689-691

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1142S142ATcaGca4850All0.000009
ORF1ab/nsp1142S142ATcaGca1414B.1.1.70.000013
ORF1ab/nsp1142S142ATcaGca1111AY.250.000066
ORF1ab/nsp1142S142ATcaGca23AY.430.000009
ORF1ab/nsp1142S142ATcaGca22B.1.1.370.000386
ORF1ab/nsp1142S142ATcaGca22B.1.1.5190.000079
ORF1ab/nsp1142S142ATcaGca22B.1.1770.000026
ORF1ab/nsp1142S142ATcaGca22B.1.2210.000142
ORF1ab/nsp1142S142ATcaGca11A0.000387
ORF1ab/nsp1142S142ATcaGca11A.20.000662
ORF1ab/nsp1142S142ATcaGca11AY.1020.000027
ORF1ab/nsp1142S142ATcaGca11AY.130.000161
ORF1ab/nsp1142S142ATcaGca11AY.30.00001
ORF1ab/nsp1142S142ATcaGca11AY.40.000002
ORF1ab/nsp1142S142ATcaGca11B.10.000009
ORF1ab/nsp1142S142ATcaGca11B.1.2030.0625
ORF1ab/nsp1142S142ATcaGca11B.1.2340.000132
ORF1ab/nsp1142S142ATcaGca11B.1.2580.000067
ORF1ab/nsp1142S142ATcaGca11L.30.003546
ORF1ab/nsp1142S142ATcaGca11P.10.000016
ORF1ab/nsp1142S142ATcaGca11Q.10.000126