CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 140 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1140L140LL140LsynctActT20076250.00124527683-685

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1140L140LctActT2520076All0.000005
ORF1ab/nsp1140L140LctActT13415B.1.1.70.000001
ORF1ab/nsp1140L140LctActT1539AY.250.000006
ORF1ab/nsp1140L140LctActT5499B.1.617.20.000019
ORF1ab/nsp1140L140LctActT1431B.10.000009
ORF1ab/nsp1140L140LctActT3337AY.440.000018
ORF1ab/nsp1140L140LctActT1256P.10.000016
ORF1ab/nsp1140L140LctActT196B.1.3510.00003
ORF1ab/nsp1140L140LctActT180B.1.5260.000024
ORF1ab/nsp1140L140LctActT120AY.230.00007
ORF1ab/nsp1140L140LctActT215B.1.438.10.000215
ORF1ab/nsp1140L140LctActT56B.1.177.560.003338
ORF1ab/nsp1140L140LctActT14AY.1100.000113
ORF1ab/nsp1140L140LctActT12A.270.001656
ORF1ab/nsp1140L140LctActT11C.350.000774