CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 140 & Codon = Tta

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1140L140LL140LsynCtaTta20076189710.944959683-685

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1140L140LCtaTta1897120076All0.003628
ORF1ab/nsp1140L140LCtaTta33983415B.1.1.70.003042
ORF1ab/nsp1140L140LCtaTta25623240B.1.20.022559
ORF1ab/nsp1140L140LCtaTta23162316B.1.466.20.906103
ORF1ab/nsp1140L140LCtaTta10161017AY.40.001581
ORF1ab/nsp1140L140LCtaTta623623B.1.3620.959938
ORF1ab/nsp1140L140LCtaTta211539AY.250.001269
ORF1ab/nsp1140L140LCtaTta491499B.1.617.20.001849
ORF1ab/nsp1140L140LCtaTta496497B.1.4270.025047
ORF1ab/nsp1140L140LCtaTta469469AU.30.989451
ORF1ab/nsp1140L140LCtaTta429431B.10.003929
ORF1ab/nsp1140L140LCtaTta420422AY.430.001861
ORF1ab/nsp1140L140LCtaTta406406AU.20.983051
ORF1ab/nsp1140L140LCtaTta334337AY.440.002033
ORF1ab/nsp1140L140LCtaTta276277AY.1030.001714
ORF1ab/nsp1140L140LCtaTta260260AY.420.01046
ORF1ab/nsp1140L140LCtaTta254256P.10.004002
ORF1ab/nsp1140L140LCtaTta212212B.1.362.21
ORF1ab/nsp1140L140LCtaTta178183AY.30.00177
ORF1ab/nsp1140L140LCtaTta173173AY.750.009692
ORF1ab/nsp1140L140LCtaTta164164B.1.10.002975
ORF1ab/nsp1140L140LCtaTta144147B.1.1770.001896
ORF1ab/nsp1140L140LCtaTta129130AY.330.008614
ORF1ab/nsp1140L140LCtaTta128128B.1.1.4060.831169
ORF1ab/nsp1140L140LCtaTta111128B.1.5960.009672
ORF1ab/nsp1140L140LCtaTta119119AY.520.096906
ORF1ab/nsp1140L140LCtaTta9596B.1.3510.002824
ORF1ab/nsp1140L140LCtaTta9393AY.1020.002466
ORF1ab/nsp1140L140LCtaTta9092AY.390.002224
ORF1ab/nsp1140L140LCtaTta9192AY.50.001879
ORF1ab/nsp1140L140LCtaTta9191AY.470.002831
ORF1ab/nsp1140L140LCtaTta8686B.1.1.3480.068471
ORF1ab/nsp1140L140LCtaTta8181AY.4.20.001757
ORF1ab/nsp1140L140LCtaTta8080B.1.4290.001882
ORF1ab/nsp1140L140LCtaTta7980B.1.5260.001857
ORF1ab/nsp1140L140LCtaTta7373AY.290.001151
ORF1ab/nsp1140L140LCtaTta6363B.1.1.5260.223404
ORF1ab/nsp1140L140LCtaTta6060AY.130.009659
ORF1ab/nsp1140L140LCtaTta6060B.1.2210.004262
ORF1ab/nsp1140L140LCtaTta5959B.1.258.140.057843
ORF1ab/nsp1140L140LCtaTta5050AY.200.001943
ORF1ab/nsp1140L140LCtaTta5050B.1.1.5190.001986
ORF1ab/nsp1140L140LCtaTta4747AY.1000.002162
ORF1ab/nsp1140L140LCtaTta4747AY.60.001933
ORF1ab/nsp1140L140LCtaTta4747B.1.2430.00327
ORF1ab/nsp1140L140LCtaTta4646B.1.1600.001435
ORF1ab/nsp1140L140LCtaTta4444AY.1200.001636
ORF1ab/nsp1140L140LCtaTta4343B.1.2580.002862
ORF1ab/nsp1140L140LCtaTta4242B.1.1.4340.014639
ORF1ab/nsp1140L140LCtaTta4141B.1.360.005982
ORF1ab/nsp1140L140LCtaTta3939B.1.5250.004413
ORF1ab/nsp1140L140LCtaTta3737B.1.1.2140.002052
ORF1ab/nsp1140L140LCtaTta3333D.20.002476
ORF1ab/nsp1140L140LCtaTta3232B.1.6210.002833
ORF1ab/nsp1140L140LCtaTta3131AY.1180.001942
ORF1ab/nsp1140L140LCtaTta2929AY.46.60.002094
ORF1ab/nsp1140L140LCtaTta2929AY.9.10.002428
ORF1ab/nsp1140L140LCtaTta2828AY.610.002934
ORF1ab/nsp1140L140LCtaTta2828B.1.1120.145078
ORF1ab/nsp1140L140LCtaTta2727AY.39.10.00107
ORF1ab/nsp1140L140LCtaTta2626AY.450.003164
ORF1ab/nsp1140L140LCtaTta2626Q.80.004288
ORF1ab/nsp1140L140LCtaTta2525B.1.1.390.012742
ORF1ab/nsp1140L140LCtaTta2324AY.46.40.003784
ORF1ab/nsp1140L140LCtaTta2323AY.460.002394
ORF1ab/nsp1140L140LCtaTta2121B.1.6280.0074
ORF1ab/nsp1140L140LCtaTta1820AY.230.001255
ORF1ab/nsp1140L140LCtaTta2020B.1.1.280.006225
ORF1ab/nsp1140L140LCtaTta1920B.1.177.810.003597
ORF1ab/nsp1140L140LCtaTta2020B.1.5670.066667
ORF1ab/nsp1140L140LCtaTta1919AY.1140.004391
ORF1ab/nsp1140L140LCtaTta1919B.1.1.500.012899
ORF1ab/nsp1140L140LCtaTta1919B.1.2320.01021
ORF1ab/nsp1140L140LCtaTta1919B.1.6370.001388
ORF1ab/nsp1140L140LCtaTta1919C.370.002205
ORF1ab/nsp1140L140LCtaTta1919P.1.170.003073
ORF1ab/nsp1140L140LCtaTta1818B.1.5880.016379
ORF1ab/nsp1140L140LCtaTta1717AY.350.003962
ORF1ab/nsp1140L140LCtaTta1717B.1.4620.123188
ORF1ab/nsp1140L140LCtaTta1717B.1.9.50.096591
ORF1ab/nsp1140L140LCtaTta1516AY.1130.002136
ORF1ab/nsp1140L140LCtaTta1616AY.260.000453
ORF1ab/nsp1140L140LCtaTta1616B.1.2340.002111
ORF1ab/nsp1140L140LCtaTta1616Q.10.002021
ORF1ab/nsp1140L140LCtaTta1515AY.1080.016538
ORF1ab/nsp1140L140LCtaTta1515AY.3.10.001279
ORF1ab/nsp1140L140LCtaTta1515AY.9.20.000551
ORF1ab/nsp1140L140LCtaTta1515B.1.2180.07732
ORF1ab/nsp1140L140LCtaTta1515B.1.362.11
ORF1ab/nsp1140L140LCtaTta1315B.1.438.10.001394
ORF1ab/nsp1140L140LCtaTta1515B.1.5950.003914
ORF1ab/nsp1140L140LCtaTta1515B.1.617.10.001934
ORF1ab/nsp1140L140LCtaTta1515P.1.60.029183
ORF1ab/nsp1140L140LCtaTta1414AQ.11
ORF1ab/nsp1140L140LCtaTta1414AY.5.30.004723
ORF1ab/nsp1140L140LCtaTta1414B.1.1.2220.002856
ORF1ab/nsp1140L140LCtaTta1414B.1.1.700.004775
ORF1ab/nsp1140L140LCtaTta1414B.1.177.600.003058
ORF1ab/nsp1140L140LCtaTta1414B.1.2400.003018
ORF1ab/nsp1140L140LCtaTta1414P.1.140.000669
ORF1ab/nsp1140L140LCtaTta1313B.1.1.250.007391
ORF1ab/nsp1140L140LCtaTta1313B.1.2390.015873
ORF1ab/nsp1140L140LCtaTta1313B.1.4740.024715
ORF1ab/nsp1140L140LCtaTta1212AY.270.000777
ORF1ab/nsp1140L140LCtaTta1212AY.98.10.000581
ORF1ab/nsp1140L140LCtaTta1212AY.99.20.001106
ORF1ab/nsp1140L140LCtaTta1212B0.001534
ORF1ab/nsp1140L140LCtaTta1212B.1.1.2650.037855
ORF1ab/nsp1140L140LCtaTta1111AY.1190.000388
ORF1ab/nsp1140L140LCtaTta1111AY.410.003233
ORF1ab/nsp1140L140LCtaTta1111AY.570.007218
ORF1ab/nsp1140L140LCtaTta1011AY.980.00079
ORF1ab/nsp1140L140LCtaTta1111B.1.1.2840.001181
ORF1ab/nsp1140L140LCtaTta1111B.1.1.3680.033951
ORF1ab/nsp1140L140LCtaTta1111B.1.1460.04661
ORF1ab/nsp1140L140LCtaTta1111B.1.428.30.141026
ORF1ab/nsp1140L140LCtaTta1010AY.1170.000845
ORF1ab/nsp1140L140LCtaTta1010B.1.1.10.003267
ORF1ab/nsp1140L140LCtaTta1010B.1.2410.008117
ORF1ab/nsp1140L140LCtaTta99AY.1210.001218
ORF1ab/nsp1140L140LCtaTta99AY.640.005357
ORF1ab/nsp1140L140LCtaTta99AY.720.012245
ORF1ab/nsp1140L140LCtaTta99B.1.5610.003573
ORF1ab/nsp1140L140LCtaTta88A0.003096
ORF1ab/nsp1140L140LCtaTta88AY.1110.001465
ORF1ab/nsp1140L140LCtaTta88AY.75.10.001442
ORF1ab/nsp1140L140LCtaTta88AY.90.000541
ORF1ab/nsp1140L140LCtaTta88B.1.1.3060.003507
ORF1ab/nsp1140L140LCtaTta88B.1.36.360.004816
ORF1ab/nsp1140L140LCtaTta88B.1.36.380.013136
ORF1ab/nsp1140L140LCtaTta88B.1.4590.032653
ORF1ab/nsp1140L140LCtaTta88B.1.5820.003925
ORF1ab/nsp1140L140LCtaTta77AD.20.001533
ORF1ab/nsp1140L140LCtaTta77AY.4.50.000752
ORF1ab/nsp1140L140LCtaTta77AY.620.00305
ORF1ab/nsp1140L140LCtaTta77AY.650.003731
ORF1ab/nsp1140L140LCtaTta77AY.920.002011
ORF1ab/nsp1140L140LCtaTta57B.1.1.2070.00591
ORF1ab/nsp1140L140LCtaTta77B.1.1050.067308
ORF1ab/nsp1140L140LCtaTta77B.1.177.790.016393
ORF1ab/nsp1140L140LCtaTta77B.1.177.830.01037
ORF1ab/nsp1140L140LCtaTta77B.1.2800.05
ORF1ab/nsp1140L140LCtaTta77B.1.5640.002981
ORF1ab/nsp1140L140LCtaTta77B.1.6090.003356
ORF1ab/nsp1140L140LCtaTta77C.360.006375
ORF1ab/nsp1140L140LCtaTta66A.10.001691
ORF1ab/nsp1140L140LCtaTta66A.2.50.002994
ORF1ab/nsp1140L140LCtaTta66AY.370.001896
ORF1ab/nsp1140L140LCtaTta66AY.46.30.005602
ORF1ab/nsp1140L140LCtaTta66B.1.1.4330.008547
ORF1ab/nsp1140L140LCtaTta66B.1.1.5210.032086
ORF1ab/nsp1140L140LCtaTta16B.1.177.560.000668
ORF1ab/nsp1140L140LCtaTta66B.1.3010.035503
ORF1ab/nsp1140L140LCtaTta66B.1.3460.007864
ORF1ab/nsp1140L140LCtaTta66B.1.4000.002574
ORF1ab/nsp1140L140LCtaTta66P.1.160.002245
ORF1ab/nsp1140L140LCtaTta66P.20.00112
ORF1ab/nsp1140L140LCtaTta55AN.10.1
ORF1ab/nsp1140L140LCtaTta55AU.10.006329
ORF1ab/nsp1140L140LCtaTta55AY.23.10.002087
ORF1ab/nsp1140L140LCtaTta55AY.320.002662
ORF1ab/nsp1140L140LCtaTta55AY.590.002648
ORF1ab/nsp1140L140LCtaTta55AY.660.005348
ORF1ab/nsp1140L140LCtaTta55AY.7.10.000564
ORF1ab/nsp1140L140LCtaTta55AY.740.000578
ORF1ab/nsp1140L140LCtaTta55AY.940.002213
ORF1ab/nsp1140L140LCtaTta55B.1.1.100.005574
ORF1ab/nsp1140L140LCtaTta55B.1.1.2770.003794
ORF1ab/nsp1140L140LCtaTta55B.1.1.2940.006329
ORF1ab/nsp1140L140LCtaTta55B.1.1.330.002104
ORF1ab/nsp1140L140LCtaTta55B.1.1.370.000964
ORF1ab/nsp1140L140LCtaTta55B.1.1450.263158
ORF1ab/nsp1140L140LCtaTta55B.1.177.40.001055
ORF1ab/nsp1140L140LCtaTta55B.1.177.730.002831
ORF1ab/nsp1140L140LCtaTta55B.1.177.860.000917
ORF1ab/nsp1140L140LCtaTta55B.1.4690.018051
ORF1ab/nsp1140L140LCtaTta55B.30.004153
ORF1ab/nsp1140L140LCtaTta55P.1.120.00242
ORF1ab/nsp1140L140LCtaTta55P.1.40.004883
ORF1ab/nsp1140L140LCtaTta44AY.1040.007937
ORF1ab/nsp1140L140LCtaTta34AY.1100.000338
ORF1ab/nsp1140L140LCtaTta44AY.1160.001147
ORF1ab/nsp1140L140LCtaTta44AY.116.10.001246
ORF1ab/nsp1140L140LCtaTta44AY.140.000352
ORF1ab/nsp1140L140LCtaTta44AY.20.001425
ORF1ab/nsp1140L140LCtaTta44AY.300.001583
ORF1ab/nsp1140L140LCtaTta44AY.4.40.001637
ORF1ab/nsp1140L140LCtaTta44AY.540.000381
ORF1ab/nsp1140L140LCtaTta44AY.70.000784
ORF1ab/nsp1140L140LCtaTta44AY.790.004843
ORF1ab/nsp1140L140LCtaTta44AY.840.00175
ORF1ab/nsp1140L140LCtaTta44AY.990.004197
ORF1ab/nsp1140L140LCtaTta44B.1.1.1700.004988
ORF1ab/nsp1140L140LCtaTta44B.1.1.2410.008282
ORF1ab/nsp1140L140LCtaTta44B.1.1.3170.001647
ORF1ab/nsp1140L140LCtaTta44B.1.1.3510.011173
ORF1ab/nsp1140L140LCtaTta44B.1.1.470.02139
ORF1ab/nsp1140L140LCtaTta34B.1.1.630.001157
ORF1ab/nsp1140L140LCtaTta44B.1.1420.011594
ORF1ab/nsp1140L140LCtaTta44B.1.177.580.005326
ORF1ab/nsp1140L140LCtaTta44B.1.36.290.002069
ORF1ab/nsp1140L140LCtaTta44B.1.36.80.004
ORF1ab/nsp1140L140LCtaTta44B.1.4990.004202
ORF1ab/nsp1140L140LCtaTta44B.1.5600.018519
ORF1ab/nsp1140L140LCtaTta44B.1.6000.023392
ORF1ab/nsp1140L140LCtaTta44N.50.007067
ORF1ab/nsp1140L140LCtaTta44P.1.100.001078
ORF1ab/nsp1140L140LCtaTta44P.1.150.000929
ORF1ab/nsp1140L140LCtaTta44P.1.70.001277
ORF1ab/nsp1140L140LCtaTta33A.23.10.002113
ORF1ab/nsp1140L140LCtaTta33AY.1010.001471
ORF1ab/nsp1140L140LCtaTta33AY.160.001139
ORF1ab/nsp1140L140LCtaTta33AY.240.001293
ORF1ab/nsp1140L140LCtaTta33AY.340.000291
ORF1ab/nsp1140L140LCtaTta33AY.4.2.10.000447
ORF1ab/nsp1140L140LCtaTta33AY.530.000863
ORF1ab/nsp1140L140LCtaTta33B.1.1.2160.002671
ORF1ab/nsp1140L140LCtaTta33B.1.1.3180.000905
ORF1ab/nsp1140L140LCtaTta33B.1.1.3690.001339
ORF1ab/nsp1140L140LCtaTta33B.1.1.3800.029412
ORF1ab/nsp1140L140LCtaTta33B.1.1.3850.013393
ORF1ab/nsp1140L140LCtaTta33B.1.1.580.016129
ORF1ab/nsp1140L140LCtaTta33B.1.1260.003827
ORF1ab/nsp1140L140LCtaTta33B.1.177.120.000455
ORF1ab/nsp1140L140LCtaTta33B.1.177.570.000843
ORF1ab/nsp1140L140LCtaTta33B.1.2060.002447
ORF1ab/nsp1140L140LCtaTta13B.1.258.170.000104
ORF1ab/nsp1140L140LCtaTta33B.1.3490.002144
ORF1ab/nsp1140L140LCtaTta33B.1.351.50.001799
ORF1ab/nsp1140L140LCtaTta33B.1.36.170.001482
ORF1ab/nsp1140L140LCtaTta33B.1.36.70.012
ORF1ab/nsp1140L140LCtaTta33B.1.3610.003866
ORF1ab/nsp1140L140LCtaTta33B.1.3670.002377
ORF1ab/nsp1140L140LCtaTta33B.1.4080.01107
ORF1ab/nsp1140L140LCtaTta33B.1.4200.03125
ORF1ab/nsp1140L140LCtaTta33B.1.4260.003027
ORF1ab/nsp1140L140LCtaTta13B.1.5170.000427
ORF1ab/nsp1140L140LCtaTta33B.1.5380.024194
ORF1ab/nsp1140L140LCtaTta33B.1.6190.002613
ORF1ab/nsp1140L140LCtaTta33B.1.930.002801
ORF1ab/nsp1140L140LCtaTta33B.400.001093
ORF1ab/nsp1140L140LCtaTta33Q.40.001364
ORF1ab/nsp1140L140LCtaTta22A.2.5.20.003145
ORF1ab/nsp1140L140LCtaTta12A.270.001656
ORF1ab/nsp1140L140LCtaTta22A.290.010638
ORF1ab/nsp1140L140LCtaTta22AY.100.00106
ORF1ab/nsp1140L140LCtaTta22AY.1070.000932
ORF1ab/nsp1140L140LCtaTta22AY.34.10.00102
ORF1ab/nsp1140L140LCtaTta22AY.360.000296
ORF1ab/nsp1140L140LCtaTta22AY.46.20.001271
ORF1ab/nsp1140L140LCtaTta22AY.5.40.000553
ORF1ab/nsp1140L140LCtaTta22AY.550.001835
ORF1ab/nsp1140L140LCtaTta22AY.710.00095
ORF1ab/nsp1140L140LCtaTta22AY.730.001331
ORF1ab/nsp1140L140LCtaTta22AY.770.002255
ORF1ab/nsp1140L140LCtaTta22AY.900.001369
ORF1ab/nsp1140L140LCtaTta22AY.910.001461
ORF1ab/nsp1140L140LCtaTta22AY.960.004149
ORF1ab/nsp1140L140LCtaTta22AZ.20.001642
ORF1ab/nsp1140L140LCtaTta22B.1.1.1530.002191
ORF1ab/nsp1140L140LCtaTta22B.1.1.1890.003026
ORF1ab/nsp1140L140LCtaTta22B.1.1.2170.007273
ORF1ab/nsp1140L140LCtaTta22B.1.1.2790.002242
ORF1ab/nsp1140L140LCtaTta22B.1.1.2890.004167
ORF1ab/nsp1140L140LCtaTta22B.1.1.3110.000716
ORF1ab/nsp1140L140LCtaTta22B.1.1.3540.008772
ORF1ab/nsp1140L140LCtaTta22B.1.1.3980.006452
ORF1ab/nsp1140L140LCtaTta22B.1.1.4220.090909
ORF1ab/nsp1140L140LCtaTta22B.1.1.460.008734
ORF1ab/nsp1140L140LCtaTta22B.1.1.5180.012658
ORF1ab/nsp1140L140LCtaTta22B.1.1280.001271
ORF1ab/nsp1140L140LCtaTta22B.1.1570.00597
ORF1ab/nsp1140L140LCtaTta22B.1.160.160.001859
ORF1ab/nsp1140L140LCtaTta22B.1.177.100.001756
ORF1ab/nsp1140L140LCtaTta22B.1.177.110.003396
ORF1ab/nsp1140L140LCtaTta22B.1.177.160.001329
ORF1ab/nsp1140L140LCtaTta22B.1.177.20.009091
ORF1ab/nsp1140L140LCtaTta22B.1.177.620.002384
ORF1ab/nsp1140L140LCtaTta22B.1.177.70.00033
ORF1ab/nsp1140L140LCtaTta22B.1.177.870.001456
ORF1ab/nsp1140L140LCtaTta22B.1.214.30.014286
ORF1ab/nsp1140L140LCtaTta22B.1.2220.003384
ORF1ab/nsp1140L140LCtaTta22B.1.2360.004107
ORF1ab/nsp1140L140LCtaTta22B.1.258.30.00335
ORF1ab/nsp1140L140LCtaTta22B.1.2650.002541
ORF1ab/nsp1140L140LCtaTta22B.1.2790.001027
ORF1ab/nsp1140L140LCtaTta22B.1.36.10.002281
ORF1ab/nsp1140L140LCtaTta22B.1.36.100.009569
ORF1ab/nsp1140L140LCtaTta22B.1.36.190.018519
ORF1ab/nsp1140L140LCtaTta22B.1.36.390.004435
ORF1ab/nsp1140L140LCtaTta22B.1.3890.002004
ORF1ab/nsp1140L140LCtaTta22B.1.3960.001411
ORF1ab/nsp1140L140LCtaTta22B.1.4010.016393
ORF1ab/nsp1140L140LCtaTta22B.1.415.10.015152
ORF1ab/nsp1140L140LCtaTta22B.1.4160.002538
ORF1ab/nsp1140L140LCtaTta22B.1.416.10.003125
ORF1ab/nsp1140L140LCtaTta22B.1.4280.002041
ORF1ab/nsp1140L140LCtaTta22B.1.4410.019231
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