CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 133 & Codon = gTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1133G133VG133VnonsyngGcgTc3793740.986807662-664

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1133G133VgGcgTc374379All0.000072
ORF1ab/nsp1133G133VgGcgTc178178D.20.013357
ORF1ab/nsp1133G133VgGcgTc3636AY.40.000056
ORF1ab/nsp1133G133VgGcgTc3333B.1.1.70.00003
ORF1ab/nsp1133G133VgGcgTc910B.10.000082
ORF1ab/nsp1133G133VgGcgTc99AY.30.00009
ORF1ab/nsp1133G133VgGcgTc99B.1.617.20.000034
ORF1ab/nsp1133G133VgGcgTc88AY.430.000035
ORF1ab/nsp1133G133VgGcgTc77AY.1030.000043
ORF1ab/nsp1133G133VgGcgTc55B.1.1770.000066
ORF1ab/nsp1133G133VgGcgTc240.111111
ORF1ab/nsp1133G133VgGcgTc44AY.250.000024
ORF1ab/nsp1133G133VgGcgTc44AY.50.000083
ORF1ab/nsp1133G133VgGcgTc44B.1.10.000073
ORF1ab/nsp1133G133VgGcgTc34B.1.2210.000213
ORF1ab/nsp1133G133VgGcgTc33AY.200.000117
ORF1ab/nsp1133G133VgGcgTc33AY.390.000074
ORF1ab/nsp1133G133VgGcgTc33B.1.1.5190.000119
ORF1ab/nsp1133G133VgGcgTc23B.4.50.02381
ORF1ab/nsp1133G133VgGcgTc22AY.1190.000071
ORF1ab/nsp1133G133VgGcgTc22AY.1200.000074
ORF1ab/nsp1133G133VgGcgTc22AY.39.10.000079
ORF1ab/nsp1133G133VgGcgTc22B.1.4290.000047
ORF1ab/nsp1133G133VgGcgTc11AY.1000.000046
ORF1ab/nsp1133G133VgGcgTc11AY.1160.000287
ORF1ab/nsp1133G133VgGcgTc11AY.1180.000063
ORF1ab/nsp1133G133VgGcgTc11AY.130.000161
ORF1ab/nsp1133G133VgGcgTc11AY.20.000356
ORF1ab/nsp1133G133VgGcgTc11AY.260.000028
ORF1ab/nsp1133G133VgGcgTc11AY.290.000016
ORF1ab/nsp1133G133VgGcgTc11AY.360.000148
ORF1ab/nsp1133G133VgGcgTc11AY.4.40.000409
ORF1ab/nsp1133G133VgGcgTc11AY.510.000909
ORF1ab/nsp1133G133VgGcgTc11AY.750.000056
ORF1ab/nsp1133G133VgGcgTc11AY.75.10.00018
ORF1ab/nsp1133G133VgGcgTc11AY.90.000068
ORF1ab/nsp1133G133VgGcgTc11B.1.1.2200.001859
ORF1ab/nsp1133G133VgGcgTc11B.1.1.2790.001121
ORF1ab/nsp1133G133VgGcgTc11B.1.1.2800.003086
ORF1ab/nsp1133G133VgGcgTc11B.1.1.2840.000107
ORF1ab/nsp1133G133VgGcgTc11B.1.1.2940.001266
ORF1ab/nsp1133G133VgGcgTc11B.1.1.3110.000358
ORF1ab/nsp1133G133VgGcgTc11B.1.1.370.000193
ORF1ab/nsp1133G133VgGcgTc11B.1.1.460.004367
ORF1ab/nsp1133G133VgGcgTc11B.1.1180.006711
ORF1ab/nsp1133G133VgGcgTc11B.1.1570.002985
ORF1ab/nsp1133G133VgGcgTc11B.1.177.60.000977
ORF1ab/nsp1133G133VgGcgTc11B.1.177.730.000566
ORF1ab/nsp1133G133VgGcgTc11B.1.177.740.015152
ORF1ab/nsp1133G133VgGcgTc11B.1.177.90.001332
ORF1ab/nsp1133G133VgGcgTc11B.1.2430.00007
ORF1ab/nsp1133G133VgGcgTc11B.1.2600.003344
ORF1ab/nsp1133G133VgGcgTc11B.1.3380.008621
ORF1ab/nsp1133G133VgGcgTc11B.1.3510.00003
ORF1ab/nsp1133G133VgGcgTc11B.1.36.160.001425
ORF1ab/nsp1133G133VgGcgTc11B.1.36.210.00216
ORF1ab/nsp1133G133VgGcgTc11B.1.4270.00005
ORF1ab/nsp1133G133VgGcgTc11B.1.4340.052632
ORF1ab/nsp1133G133VgGcgTc11B.1.5260.000024
ORF1ab/nsp1133G133VgGcgTc11B.1.5960.000087
ORF1ab/nsp1133G133VgGcgTc11B.1.6370.000073
ORF1ab/nsp1133G133VgGcgTc11B.290.003509
ORF1ab/nsp1133G133VgGcgTc11B.350.007812
ORF1ab/nsp1133G133VgGcgTc11D.30.005917
ORF1ab/nsp1133G133VgGcgTc11P.10.000016
ORF1ab/nsp1133G133VgGcgTc11Q.40.000455
ORF1ab/nsp1133G133VgGcgTc11U.10.012821