CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 119 & Codon = cTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1119R119LR119LnonsyncGccTc41411620-622

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1119R119LcGccTc4141All0.000008
ORF1ab/nsp1119R119LcGccTc99B.1.1.70.000008
ORF1ab/nsp1119R119LcGccTc44AY.40.000006
ORF1ab/nsp1119R119LcGccTc44AY.710.0019
ORF1ab/nsp1119R119LcGccTc33AY.430.000013
ORF1ab/nsp1119R119LcGccTc33B.10.000027
ORF1ab/nsp1119R119LcGccTc22AY.1020.000053
ORF1ab/nsp1119R119LcGccTc22AY.1030.000012
ORF1ab/nsp1119R119LcGccTc22AY.46.60.000144
ORF1ab/nsp1119R119LcGccTc22AY.9.10.000167
ORF1ab/nsp1119R119LcGccTc11AY.280.00189
ORF1ab/nsp1119R119LcGccTc11AY.30.00001
ORF1ab/nsp1119R119LcGccTc11AY.390.000025
ORF1ab/nsp1119R119LcGccTc11AY.39.20.001541
ORF1ab/nsp1119R119LcGccTc11B.1.1.4090.002833
ORF1ab/nsp1119R119LcGccTc11B.1.258.170.000104
ORF1ab/nsp1119R119LcGccTc11B.1.4000.000429
ORF1ab/nsp1119R119LcGccTc11B.1.617.20.000004
ORF1ab/nsp1119R119LcGccTc11B.120.00641
ORF1ab/nsp1119R119LcGccTc11Q.40.000455