CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 118 & Codon = tGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1118Y118CY118CnonsyntActGc2352351617-619

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1118Y118CtActGc235235All0.000045
ORF1ab/nsp1118Y118CtActGc100100B.1.20.000881
ORF1ab/nsp1118Y118CtActGc5656AY.440.000341
ORF1ab/nsp1118Y118CtActGc3939B.1.2110.975
ORF1ab/nsp1118Y118CtActGc66B.10.000055
ORF1ab/nsp1118Y118CtActGc44AY.30.00004
ORF1ab/nsp1118Y118CtActGc33AY.1030.000019
ORF1ab/nsp1118Y118CtActGc33AY.40.000005
ORF1ab/nsp1118Y118CtActGc33B.1.1.70.000003
ORF1ab/nsp1118Y118CtActGc33B.1.617.20.000011
ORF1ab/nsp1118Y118CtActGc22AY.610.00021
ORF1ab/nsp1118Y118CtActGc22B.1.2210.000142
ORF1ab/nsp1118Y118CtActGc11AY.1130.000142
ORF1ab/nsp1118Y118CtActGc11AY.230.00007
ORF1ab/nsp1118Y118CtActGc11AY.250.000006
ORF1ab/nsp1118Y118CtActGc11AY.260.000028
ORF1ab/nsp1118Y118CtActGc11AY.330.000067
ORF1ab/nsp1118Y118CtActGc11AY.390.000025
ORF1ab/nsp1118Y118CtActGc11AY.430.000004
ORF1ab/nsp1118Y118CtActGc11B.1.1.1940.00495
ORF1ab/nsp1118Y118CtActGc11B.1.1.2220.000204
ORF1ab/nsp1118Y118CtActGc11B.1.1.470.005348
ORF1ab/nsp1118Y118CtActGc11B.1.177.440.000519
ORF1ab/nsp1118Y118CtActGc11B.1.2340.000132
ORF1ab/nsp1118Y118CtActGc11B.1.6340.003425
ORF1ab/nsp1118Y118CtActGc11P.10.000016