CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 118 & Codon = Cac

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1118Y118HY118HnonsynTacCac5795791617-619

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1118Y118HTacCac579579All0.000111
ORF1ab/nsp1118Y118HTacCac213213AY.260.00603
ORF1ab/nsp1118Y118HTacCac6464B.1.1.70.000057
ORF1ab/nsp1118Y118HTacCac5454AY.680.014782
ORF1ab/nsp1118Y118HTacCac3939AY.40.000061
ORF1ab/nsp1118Y118HTacCac1515AY.250.00009
ORF1ab/nsp1118Y118HTacCac1414B.1.20.000123
ORF1ab/nsp1118Y118HTacCac1313AY.1140.003004
ORF1ab/nsp1118Y118HTacCac1212AY.1190.000424
ORF1ab/nsp1118Y118HTacCac1111AY.140.000968
ORF1ab/nsp1118Y118HTacCac1010B.1.1.1740.033784
ORF1ab/nsp1118Y118HTacCac1010B.1.617.20.000038
ORF1ab/nsp1118Y118HTacCac99AY.430.00004
ORF1ab/nsp1118Y118HTacCac99B.1.351.20.002723
ORF1ab/nsp1118Y118HTacCac66B.1.258.170.000624
ORF1ab/nsp1118Y118HTacCac55AY.1030.000031
ORF1ab/nsp1118Y118HTacCac55B.10.000046
ORF1ab/nsp1118Y118HTacCac55B.1.2430.000348
ORF1ab/nsp1118Y118HTacCac44AY.440.000024
ORF1ab/nsp1118Y118HTacCac33AY.30.00003
ORF1ab/nsp1118Y118HTacCac33AY.4.20.000065
ORF1ab/nsp1118Y118HTacCac33B.1.10.000054
ORF1ab/nsp1118Y118HTacCac33B.1.1.2200.005576
ORF1ab/nsp1118Y118HTacCac33B.1.1770.00004
ORF1ab/nsp1118Y118HTacCac33B.1.177.210.000229
ORF1ab/nsp1118Y118HTacCac33B.1.4270.000151
ORF1ab/nsp1118Y118HTacCac220.111111
ORF1ab/nsp1118Y118HTacCac22AY.46.60.000144
ORF1ab/nsp1118Y118HTacCac22AY.75.10.000361
ORF1ab/nsp1118Y118HTacCac22AY.980.000158
ORF1ab/nsp1118Y118HTacCac22B.1.1.5190.000079
ORF1ab/nsp1118Y118HTacCac22B.1.177.860.000367
ORF1ab/nsp1118Y118HTacCac22B.1.3510.000059
ORF1ab/nsp1118Y118HTacCac22B.1.36.380.003284
ORF1ab/nsp1118Y118HTacCac22B.1.617.10.000258
ORF1ab/nsp1118Y118HTacCac22B.1.910.004149
ORF1ab/nsp1118Y118HTacCac11AY.100.00053
ORF1ab/nsp1118Y118HTacCac11AY.1000.000046
ORF1ab/nsp1118Y118HTacCac11AY.1020.000027
ORF1ab/nsp1118Y118HTacCac11AY.1130.000142
ORF1ab/nsp1118Y118HTacCac11AY.230.00007
ORF1ab/nsp1118Y118HTacCac11AY.270.000065
ORF1ab/nsp1118Y118HTacCac11AY.380.000499
ORF1ab/nsp1118Y118HTacCac11AY.390.000025
ORF1ab/nsp1118Y118HTacCac11AY.420.00004
ORF1ab/nsp1118Y118HTacCac11AY.450.000122
ORF1ab/nsp1118Y118HTacCac11AY.46.40.000165
ORF1ab/nsp1118Y118HTacCac11AY.50.000021
ORF1ab/nsp1118Y118HTacCac11AY.5.30.000337
ORF1ab/nsp1118Y118HTacCac11AY.520.000814
ORF1ab/nsp1118Y118HTacCac11AY.60.000041
ORF1ab/nsp1118Y118HTacCac11AY.90.000068
ORF1ab/nsp1118Y118HTacCac11AY.9.20.000037
ORF1ab/nsp1118Y118HTacCac11AY.99.20.000092
ORF1ab/nsp1118Y118HTacCac11B.1.1.2630.001558
ORF1ab/nsp1118Y118HTacCac11B.1.1.3180.000302
ORF1ab/nsp1118Y118HTacCac11B.1.1.3330.001076
ORF1ab/nsp1118Y118HTacCac11B.1.1.4120.007634
ORF1ab/nsp1118Y118HTacCac11B.1.1.5230.001563
ORF1ab/nsp1118Y118HTacCac11B.1.1.5280.004808
ORF1ab/nsp1118Y118HTacCac11B.1.160.290.004219
ORF1ab/nsp1118Y118HTacCac11B.1.177.650.000665
ORF1ab/nsp1118Y118HTacCac11B.1.177.750.001041
ORF1ab/nsp1118Y118HTacCac11B.1.214.20.0006
ORF1ab/nsp1118Y118HTacCac11B.1.214.30.007143
ORF1ab/nsp1118Y118HTacCac11B.1.2600.003344
ORF1ab/nsp1118Y118HTacCac11B.1.3490.000715
ORF1ab/nsp1118Y118HTacCac11B.1.36.80.001
ORF1ab/nsp1118Y118HTacCac11B.1.4160.001269
ORF1ab/nsp1118Y118HTacCac11B.1.466.20.000391
ORF1ab/nsp1118Y118HTacCac11B.1.5950.000261
ORF1ab/nsp1118Y118HTacCac11B.1.5960.000087
ORF1ab/nsp1118Y118HTacCac11B.1.6270.00202
ORF1ab/nsp1118Y118HTacCac11B.1.6280.000352
ORF1ab/nsp1118Y118HTacCac11C.370.000116
ORF1ab/nsp1118Y118HTacCac11P.10.000016