CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 111 & Codon = gtA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1111V111VV111VsyngtGgtA299513180.440067596-598

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1111V111VgtGgtA13182995All0.000252
ORF1ab/nsp1111V111VgtGgtA867868P.1.140.041444
ORF1ab/nsp1111V111VgtGgtA61396B.1.1.70.000055
ORF1ab/nsp1111V111VgtGgtA13166B.1.617.20.000049
ORF1ab/nsp1111V111VgtGgtA1136B.1.20.000009
ORF1ab/nsp1111V111VgtGgtA120126AY.50.002478
ORF1ab/nsp1111V111VgtGgtA40121AY.40.000062
ORF1ab/nsp1111V111VgtGgtA3665AY.1030.000224
ORF1ab/nsp1111V111VgtGgtA260B.10.000018
ORF1ab/nsp1111V111VgtGgtA730AY.430.000031
ORF1ab/nsp1111V111VgtGgtA927AY.1020.000239
ORF1ab/nsp1111V111VgtGgtA325AY.250.000018
ORF1ab/nsp1111V111VgtGgtA825AY.30.00008
ORF1ab/nsp1111V111VgtGgtA923AY.440.000055
ORF1ab/nsp1111V111VgtGgtA1920AY.60.000781
ORF1ab/nsp1111V111VgtGgtA1919B.1.177.90.0253
ORF1ab/nsp1111V111VgtGgtA717P.10.00011
ORF1ab/nsp1111V111VgtGgtA213AY.1200.000074
ORF1ab/nsp1111V111VgtGgtA713B.1.10.000127
ORF1ab/nsp1111V111VgtGgtA111AY.200.000039
ORF1ab/nsp1111V111VgtGgtA58B.1.1.5190.000199
ORF1ab/nsp1111V111VgtGgtA27AY.260.000057
ORF1ab/nsp1111V111VgtGgtA17B.1.2320.000537
ORF1ab/nsp1111V111VgtGgtA27B.1.5960.000174
ORF1ab/nsp1111V111VgtGgtA16AY.1180.000063
ORF1ab/nsp1111V111VgtGgtA16AY.610.000105
ORF1ab/nsp1111V111VgtGgtA36B.1.360.000438
ORF1ab/nsp1111V111VgtGgtA26B.1.4290.000047
ORF1ab/nsp1111V111VgtGgtA66Q.30.00087
ORF1ab/nsp1111V111VgtGgtA15AY.230.00007
ORF1ab/nsp1111V111VgtGgtA35AY.390.000074
ORF1ab/nsp1111V111VgtGgtA45B.1.2210.000284
ORF1ab/nsp1111V111VgtGgtA240.111111
ORF1ab/nsp1111V111VgtGgtA24AY.290.000032
ORF1ab/nsp1111V111VgtGgtA34AY.3.10.000256
ORF1ab/nsp1111V111VgtGgtA34AY.420.000121
ORF1ab/nsp1111V111VgtGgtA34B.1.1.2140.000166
ORF1ab/nsp1111V111VgtGgtA24B.1.2580.000133
ORF1ab/nsp1111V111VgtGgtA24B.1.3510.000059
ORF1ab/nsp1111V111VgtGgtA14B.1.5260.000024
ORF1ab/nsp1111V111VgtGgtA44B.1.617.10.000516
ORF1ab/nsp1111V111VgtGgtA44B.1.6370.000292
ORF1ab/nsp1111V111VgtGgtA13AY.75.10.00018
ORF1ab/nsp1111V111VgtGgtA33AY.9.10.000251
ORF1ab/nsp1111V111VgtGgtA33B.1.4270.000151
ORF1ab/nsp1111V111VgtGgtA12AY.1080.001103
ORF1ab/nsp1111V111VgtGgtA12AY.270.000065
ORF1ab/nsp1111V111VgtGgtA12AY.360.000148
ORF1ab/nsp1111V111VgtGgtA22B.1.1.3060.000877
ORF1ab/nsp1111V111VgtGgtA22B.1.177.70.00033
ORF1ab/nsp1111V111VgtGgtA22B.1.351.20.000605
ORF1ab/nsp1111V111VgtGgtA12B.1.6210.000089
ORF1ab/nsp1111V111VgtGgtA12N.40.004255
ORF1ab/nsp1111V111VgtGgtA11AY.680.000274
ORF1ab/nsp1111V111VgtGgtA11AY.740.000116
ORF1ab/nsp1111V111VgtGgtA11B.1.1.2310.003096
ORF1ab/nsp1111V111VgtGgtA11B.1.1.4080.027778
ORF1ab/nsp1111V111VgtGgtA11B.1.177.650.000665
ORF1ab/nsp1111V111VgtGgtA11B.1.214.20.0006
ORF1ab/nsp1111V111VgtGgtA11B.1.258.50.008772
ORF1ab/nsp1111V111VgtGgtA11B.1.4160.001269
ORF1ab/nsp1111V111VgtGgtA11B.1.4380.006536
ORF1ab/nsp1111V111VgtGgtA11B.1.438.10.000107
ORF1ab/nsp1111V111VgtGgtA11D.20.000075
ORF1ab/nsp1111V111VgtGgtA11L.30.003546