CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 109 & Codon = ccC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1109P109PP109PsynccTccC353623620.667986590-592

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1109P109PccTccC23623536All0.000452
ORF1ab/nsp1109P109PccTccC11971197P.10.018858
ORF1ab/nsp1109P109PccTccC61040AY.30.00006
ORF1ab/nsp1109P109PccTccC209209P.1.81
ORF1ab/nsp1109P109PccTccC202202P.1.90.971154
ORF1ab/nsp1109P109PccTccC152160B.1.1.70.000136
ORF1ab/nsp1109P109PccTccC152152AY.1010.074546
ORF1ab/nsp1109P109PccTccC3056B.1.617.20.000113
ORF1ab/nsp1109P109PccTccC3953AY.430.000173
ORF1ab/nsp1109P109PccTccC4851AY.40.000075
ORF1ab/nsp1109P109PccTccC939AY.440.000055
ORF1ab/nsp1109P109PccTccC3232B.1.2800.228571
ORF1ab/nsp1109P109PccTccC2930AY.250.000174
ORF1ab/nsp1109P109PccTccC1622B.1.20.000141
ORF1ab/nsp1109P109PccTccC1219AY.1030.000075
ORF1ab/nsp1109P109PccTccC1818P.1.120.008712
ORF1ab/nsp1109P109PccTccC1717B.1.177.120.002579
ORF1ab/nsp1109P109PccTccC1414B.1.110.30.010057
ORF1ab/nsp1109P109PccTccC1011B.1.10.000181
ORF1ab/nsp1109P109PccTccC89B.10.000073
ORF1ab/nsp1109P109PccTccC99B.1.4290.000212
ORF1ab/nsp1109P109PccTccC88AY.1000.000368
ORF1ab/nsp1109P109PccTccC88B.1.1.3010.009434
ORF1ab/nsp1109P109PccTccC58B.1.1770.000066
ORF1ab/nsp1109P109PccTccC88B.30.006645
ORF1ab/nsp1109P109PccTccC47AY.1180.000251
ORF1ab/nsp1109P109PccTccC67AY.5.30.002024
ORF1ab/nsp1109P109PccTccC37B.1.6370.000219
ORF1ab/nsp1109P109PccTccC66B.1.1.3030.016575
ORF1ab/nsp1109P109PccTccC55P.1.140.000239
ORF1ab/nsp1109P109PccTccC34AY.1020.00008
ORF1ab/nsp1109P109PccTccC44AY.1190.000141
ORF1ab/nsp1109P109PccTccC44AY.200.000155
ORF1ab/nsp1109P109PccTccC44AY.270.000259
ORF1ab/nsp1109P109PccTccC14AY.390.000025
ORF1ab/nsp1109P109PccTccC14AY.50.000021
ORF1ab/nsp1109P109PccTccC44B.1.2100.008529
ORF1ab/nsp1109P109PccTccC44P.1.130.003594
ORF1ab/nsp1109P109PccTccC13AY.230.00007
ORF1ab/nsp1109P109PccTccC33AY.260.000085
ORF1ab/nsp1109P109PccTccC23AY.450.000243
ORF1ab/nsp1109P109PccTccC23AY.460.000208
ORF1ab/nsp1109P109PccTccC33AY.46.20.001906
ORF1ab/nsp1109P109PccTccC33AY.60.000123
ORF1ab/nsp1109P109PccTccC33AY.650.001599
ORF1ab/nsp1109P109PccTccC33B.1.1600.000094
ORF1ab/nsp1109P109PccTccC33B.1.4270.000151
ORF1ab/nsp1109P109PccTccC23B.1.5260.000047
ORF1ab/nsp1109P109PccTccC33B.1.5750.00091
ORF1ab/nsp1109P109PccTccC13B.1.6210.000089
ORF1ab/nsp1109P109PccTccC33P.1.160.001122
ORF1ab/nsp1109P109PccTccC22AY.240.000862
ORF1ab/nsp1109P109PccTccC22AY.4.20.000043
ORF1ab/nsp1109P109PccTccC22AY.500.001599
ORF1ab/nsp1109P109PccTccC22AZ.30.00304
ORF1ab/nsp1109P109PccTccC22B.1.177.70.00033
ORF1ab/nsp1109P109PccTccC22B.1.2580.000133
ORF1ab/nsp1109P109PccTccC12B.1.5960.000087
ORF1ab/nsp1109P109PccTccC12C.370.000116
ORF1ab/nsp1109P109PccTccC22P.1.10.000635
ORF1ab/nsp1109P109PccTccC11AY.1060.000335
ORF1ab/nsp1109P109PccTccC11AY.1200.000037
ORF1ab/nsp1109P109PccTccC11AY.290.000016
ORF1ab/nsp1109P109PccTccC11AY.39.10.00004
ORF1ab/nsp1109P109PccTccC11AY.4.30.000842
ORF1ab/nsp1109P109PccTccC11AY.4.50.000107
ORF1ab/nsp1109P109PccTccC11AY.90.000068
ORF1ab/nsp1109P109PccTccC11AY.9.10.000084
ORF1ab/nsp1109P109PccTccC11AY.9.20.000037
ORF1ab/nsp1109P109PccTccC11AY.920.000287
ORF1ab/nsp1109P109PccTccC11AY.990.001049
ORF1ab/nsp1109P109PccTccC11B.1.1.2940.001266
ORF1ab/nsp1109P109PccTccC11B.1.1.4090.002833
ORF1ab/nsp1109P109PccTccC11B.1.177.210.000076
ORF1ab/nsp1109P109PccTccC11B.1.177.330.001645
ORF1ab/nsp1109P109PccTccC11B.1.2430.00007
ORF1ab/nsp1109P109PccTccC11B.1.3110.000275
ORF1ab/nsp1109P109PccTccC11B.1.3510.00003
ORF1ab/nsp1109P109PccTccC11B.1.4010.008197
ORF1ab/nsp1109P109PccTccC11B.1.5820.000491
ORF1ab/nsp1109P109PccTccC11B.1.5970.00463
ORF1ab/nsp1109P109PccTccC11B.1.617.10.000129
ORF1ab/nsp1109P109PccTccC11C.37.10.002618
ORF1ab/nsp1109P109PccTccC11P.1.150.000232
ORF1ab/nsp1109P109PccTccC11P.1.70.000319
ORF1ab/nsp1109P109PccTccC11P.20.000187
ORF1ab/nsp1109P109PccTccC11Q.80.000165