CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 100

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1100S100NS100NnonsynaGtaAt439243921563-565
ORF1ab/nsp1100S100CS100CnonsynAgtTgt131713160.999241563-565
ORF1ab/nsp1100S100CS100CnonsynAgTTgC131710.000759301563-565
ORF1ab/nsp1100S100GS100GnonsynAgtGgt6036020.998342563-565
ORF1ab/nsp1100S100GS100GnonsynAgTGgC60310.00165837563-565
ORF1ab/nsp1100S100SS100SsynagTagC4774771563-565
ORF1ab/nsp1100S100RS100RnonsynagTagG75300.4563-565
ORF1ab/nsp1100S100RS100RnonsynAgtCgt75220.293333563-565
ORF1ab/nsp1100S100RS100RnonsynagTagA75180.24563-565
ORF1ab/nsp1100S100RS100RnonsynAgTCgG7550.0666667563-565
ORF1ab/nsp1100S100delS100deldelAGT---68681563-565
ORF1ab/nsp1100S100IS100InonsynaGtaTt57571563-565
ORF1ab/nsp1100S100WS100WnonsynAgTTgG19191563-565
ORF1ab/nsp1100S100TS100TnonsynaGtaCt771563-565
ORF1ab/nsp1100S100del1S100del1delAgt-gt420.5563-565
ORF1ab/nsp1100S100del1S100del1delaGta-t410.25563-565
ORF1ab/nsp1100S100del1S100del1delagTag-410.25563-565
ORF1ab/nsp1100S100del2S100del2delAGt--t221563-565
ORF1ab/nsp1100S100YS100YnonsynAGtTAt210.5563-565
ORF1ab/nsp1100S100YS100YnonsynAGTTAC210.5563-565
ORF1ab/nsp1100S100XS100XnonsynAGTTAG111563-565
ORF1ab/nsp1100S100KS100KnonsynaGTaAG111563-565
ORF1ab/nsp1100S100HS100HnonsynAGtCAt111563-565

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1100S100NaGtaAt43924392All0.00084
ORF1ab/nsp1100S100NaGtaAt37713771AY.40.005869
ORF1ab/nsp1100S100CAgtTgt13161317All0.000252
ORF1ab/nsp1100S100CAgTTgC11317All0
ORF1ab/nsp1100S100CAgtTgt884884AY.4.30.744108
ORF1ab/nsp1100S100GAgtGgt602603All0.000115
ORF1ab/nsp1100S100GAgTGgC1603All0
ORF1ab/nsp1100S100SagTagC477477All0.000091
ORF1ab/nsp1100S100NaGtaAt325325AY.30.003233
ORF1ab/nsp1100S100CAgtTgt247247AY.40.000384
ORF1ab/nsp1100S100GAgtGgt134134AY.1200.004982
ORF1ab/nsp1100S100SagTagC108108AY.250.00065
ORF1ab/nsp1100S100GAgtGgt105105AY.1020.002784
ORF1ab/nsp1100S100GAgtGgt103104B.1.617.20.000388
ORF1ab/nsp1100S100GAgTGgC1104B.1.617.20.000004
ORF1ab/nsp1100S100SagTagC100100AY.46.60.007221
ORF1ab/nsp1100S100NaGtaAt100100B.1.617.20.000377
ORF1ab/nsp1100S100RagTagG3075All0.000006
ORF1ab/nsp1100S100RAgtCgt2275All0.000004
ORF1ab/nsp1100S100RagTagA1875All0.000003
ORF1ab/nsp1100S100RAgTCgG575All0.000001
ORF1ab/nsp1100S100delAGT---6868All0.000013
ORF1ab/nsp1100S100IaGtaTt5757All0.000011
ORF1ab/nsp1100S100GAgtGgt4343AY.260.001217
ORF1ab/nsp1100S100SagTagC4040AY.390.000988
ORF1ab/nsp1100S100SagTagC3939B.1.1.5190.001549
ORF1ab/nsp1100S100NaGtaAt3737B.1.1.70.000033
ORF1ab/nsp1100S100SagTagC3535B.1.1.70.000031
ORF1ab/nsp1100S100GAgtGgt3131AY.390.000766
ORF1ab/nsp1100S100RagTagG1324AY.40.00002
ORF1ab/nsp1100S100RAgtCgt524AY.40.000008
ORF1ab/nsp1100S100RagTagA324AY.40.000005
ORF1ab/nsp1100S100RAgTCgG324AY.40.000005
ORF1ab/nsp1100S100GAgtGgt2424B.1.2340.003167
ORF1ab/nsp1100S100SagTagC2222B.1.4290.000518
ORF1ab/nsp1100S100SagTagC2121AY.40.000033
ORF1ab/nsp1100S100GAgtGgt2020AY.200.000777
ORF1ab/nsp1100S100SagTagC2020B.1.1770.000263
ORF1ab/nsp1100S100WAgTTgG1919All0.000004
ORF1ab/nsp1100S100NaGtaAt1717AY.430.000075
ORF1ab/nsp1100S100NaGtaAt1717B.1.351.50.010192
ORF1ab/nsp1100S100RagTagG1016AY.4.50.001075
ORF1ab/nsp1100S100RAgtCgt416AY.4.50.00043
ORF1ab/nsp1100S100RAgTCgG216AY.4.50.000215
ORF1ab/nsp1100S100GAgtGgt1515AY.440.000091
ORF1ab/nsp1100S100GAgtGgt1414AY.430.000062
ORF1ab/nsp1100S100CAgtTgt1414AY.440.000085
ORF1ab/nsp1100S100CAgtTgt1414B.10.000128
ORF1ab/nsp1100S100GAgtGgt1313AY.1160.003728
ORF1ab/nsp1100S100CAgtTgt1313AY.4.50.001397
ORF1ab/nsp1100S100CAgtTgt1313B.1.617.20.000049
ORF1ab/nsp1100S100CAgtTgt1212B.1.1.70.000011
ORF1ab/nsp1100S100NaGtaAt1111B.1.1770.000145
ORF1ab/nsp1100S100SagTagC1111B.1.617.20.000041
ORF1ab/nsp1100S100CAgtTgt1010AY.420.000402
ORF1ab/nsp1100S100NaGtaAt1010AY.440.000061
ORF1ab/nsp1100S100SagTagC1010AY.960.020747
ORF1ab/nsp1100S100SagTagC99AY.1100.001014
ORF1ab/nsp1100S100GAgtGgt99AY.250.000054
ORF1ab/nsp1100S100CAgtTgt99AY.370.002845
ORF1ab/nsp1100S100GAgtGgt99AY.40.000014
ORF1ab/nsp1100S100IaGtaTt99AY.40.000014
ORF1ab/nsp1100S100SagTagC99AY.430.00004
ORF1ab/nsp1100S100GAgtGgt99B.1.1.70.000008
ORF1ab/nsp1100S100WAgTTgG88AY.40.000012
ORF1ab/nsp1100S100NaGtaAt88AY.420.000322
ORF1ab/nsp1100S100delAGT---88B.1.1.70.000007
ORF1ab/nsp1100S100TaGtaCt77All0.000001
ORF1ab/nsp1100S100CAgtTgt77AY.450.000852
ORF1ab/nsp1100S100CAgtTgt77B.1.20.000062
ORF1ab/nsp1100S100NaGtaAt66AY.4.50.000645
ORF1ab/nsp1100S100GAgtGgt66AY.50.000124
ORF1ab/nsp1100S100IaGtaTt66B.10.000055
ORF1ab/nsp1100S100NaGtaAt66B.1.20.000053
ORF1ab/nsp1100S100SagTagC66B.1.20.000053
ORF1ab/nsp1100S100IaGtaTt66B.1.617.20.000023
ORF1ab/nsp1100S100NaGtaAt55AY.1170.000423
ORF1ab/nsp1100S100NaGtaAt55AY.250.00003
ORF1ab/nsp1100S100WAgTTgG55AY.4.50.000537
ORF1ab/nsp1100S100CAgtTgt55AY.430.000022
ORF1ab/nsp1100S100IaGtaTt55AY.60.000206
ORF1ab/nsp1100S100GAgtGgt55B.10.000046
ORF1ab/nsp1100S100CAgtTgt55B.1.177.870.003639
ORF1ab/nsp1100S100NaGtaAt55B.1.36.80.005
ORF1ab/nsp1100S100CAgtTgt55C.370.00058
ORF1ab/nsp1100S100del1Agt-gt24All0
ORF1ab/nsp1100S100del1agTag-14All0
ORF1ab/nsp1100S100del1aGta-t14All0
ORF1ab/nsp1100S100SagTagC44AY.1020.000106
ORF1ab/nsp1100S100GAgtGgt44AY.30.00004
ORF1ab/nsp1100S100NaGtaAt44AY.320.00213
ORF1ab/nsp1100S100CAgtTgt44AY.390.000099
ORF1ab/nsp1100S100delAGT---44AY.4.50.00043
ORF1ab/nsp1100S100delAGT---44AY.430.000018
ORF1ab/nsp1100S100GAgtGgt44AY.580.00363
ORF1ab/nsp1100S100NaGtaAt44B.10.000037
ORF1ab/nsp1100S100delAGT---44B.1.1.330.001684
ORF1ab/nsp1100S100delAGT---44B.1.1.3480.003185
ORF1ab/nsp1100S100GAgtGgt44B.1.177.170.003284
ORF1ab/nsp1100S100GAgtGgt44B.1.4290.000094
ORF1ab/nsp1100S100NaGtaAt33AY.1000.000138
ORF1ab/nsp1100S100CAgtTgt33AY.1000.000138
ORF1ab/nsp1100S100GAgtGgt33AY.1030.000019
ORF1ab/nsp1100S100SagTagC33AY.200.000117
ORF1ab/nsp1100S100IaGtaTt33AY.260.000085
ORF1ab/nsp1100S100CAgtTgt33AY.30.00003
ORF1ab/nsp1100S100NaGtaAt33AY.350.000699
ORF1ab/nsp1100S100RagTagA33AY.390.000074
ORF1ab/nsp1100S100delAGT---33AY.40.000005
ORF1ab/nsp1100S100CAgtTgt33AY.46.60.000217
ORF1ab/nsp1100S100NaGtaAt33AY.60.000123
ORF1ab/nsp1100S100CAgtTgt33AY.80.001818
ORF1ab/nsp1100S100CAgtTgt33AY.90.000203
ORF1ab/nsp1100S100RAgtCgt23AY.90.000135
ORF1ab/nsp1100S100RagTagG13AY.90.000068
ORF1ab/nsp1100S100RagTagA33B.1.1.70.000003
ORF1ab/nsp1100S100delAGT---33B.1.177.40.000633
ORF1ab/nsp1100S100SagTagC33B.1.177.90.003995
ORF1ab/nsp1100S100delAGT---33B.1.20.000026
ORF1ab/nsp1100S100CAgtTgt33B.1.3510.000089
ORF1ab/nsp1100S100NaGtaAt33B.1.360.000438
ORF1ab/nsp1100S100GAgtGgt33B.1.36.170.001482
ORF1ab/nsp1100S100NaGtaAt33B.1.4290.000071
ORF1ab/nsp1100S100SagTagC33B.1.5260.000071
ORF1ab/nsp1100S100CAgtTgt33P.10.000047
ORF1ab/nsp1100S100del2AGt--t22All0
ORF1ab/nsp1100S100YAGTTAC12All0
ORF1ab/nsp1100S100YAGtTAt12All0
ORF1ab/nsp1100S100GAgtGgt22AY.1000.000092
ORF1ab/nsp1100S100CAgtTgt22AY.1020.000053
ORF1ab/nsp1100S100NaGtaAt22AY.1020.000053
ORF1ab/nsp1100S100NaGtaAt22AY.1030.000012
ORF1ab/nsp1100S100CAgtTgt22AY.1030.000012
ORF1ab/nsp1100S100IaGtaTt22AY.1030.000012
ORF1ab/nsp1100S100GAgtGgt22AY.1100.000225
ORF1ab/nsp1100S100NaGtaAt22AY.120.000632
ORF1ab/nsp1100S100IaGtaTt22AY.120.000632
ORF1ab/nsp1100S100WAgTTgG22AY.1200.000074
ORF1ab/nsp1100S100CAgtTgt22AY.1200.000074
ORF1ab/nsp1100S100RagTagG22AY.1200.000074
ORF1ab/nsp1100S100GAgtGgt22AY.230.000139
ORF1ab/nsp1100S100delAGT---22AY.250.000012
ORF1ab/nsp1100S100CAgtTgt22AY.260.000057
ORF1ab/nsp1100S100CAgtTgt22AY.290.000032
ORF1ab/nsp1100S100GAgtGgt22AY.330.000134
ORF1ab/nsp1100S100NaGtaAt22AY.360.000296
ORF1ab/nsp1100S100NaGtaAt22AY.390.000049
ORF1ab/nsp1100S100CAgtTgt22AY.39.10.000079
ORF1ab/nsp1100S100GAgtGgt22AY.4.20.000043
ORF1ab/nsp1100S100NaGtaAt22AY.4.20.000043
ORF1ab/nsp1100S100CAgtTgt22AY.4.20.000043
ORF1ab/nsp1100S100NaGtaAt22AY.4.40.000818
ORF1ab/nsp1100S100SagTagC22AY.440.000012
ORF1ab/nsp1100S100SagTagC22AY.460.000208
ORF1ab/nsp1100S100SagTagC22AY.50.000041
ORF1ab/nsp1100S100SagTagC22AY.750.000112
ORF1ab/nsp1100S100RAgtCgt12AY.80.000606
ORF1ab/nsp1100S100RagTagG12AY.80.000606
ORF1ab/nsp1100S100NaGtaAt22AY.840.000875
ORF1ab/nsp1100S100SagTagC22B0.000256
ORF1ab/nsp1100S100SagTagC22B.1.10.000036
ORF1ab/nsp1100S100CAgtTgt22B.1.10.000036
ORF1ab/nsp1100S100TaGtaCt22B.1.1.70.000002
ORF1ab/nsp1100S100IaGtaTt22B.1.1.70.000002
ORF1ab/nsp1100S100SagTagC22B.1.1890.008584
ORF1ab/nsp1100S100GAgtGgt22B.1.20.000018
ORF1ab/nsp1100S100IaGtaTt22B.1.20.000018
ORF1ab/nsp1100S100RagTagA12B.1.20.000009
ORF1ab/nsp1100S100RAgtCgt12B.1.20.000009
ORF1ab/nsp1100S100CAgtTgt22B.1.2400.000431
ORF1ab/nsp1100S100GAgtGgt22B.1.2430.000139
ORF1ab/nsp1100S100CAgtTgt22B.1.2600.006689
ORF1ab/nsp1100S100NaGtaAt22B.1.36.240.012346
ORF1ab/nsp1100S100CAgtTgt22B.1.4290.000047
ORF1ab/nsp1100S100delAGT---22B.1.617.20.000008
ORF1ab/nsp1100S100RAgtCgt12B.1.617.20.000004
ORF1ab/nsp1100S100RagTagA12B.1.617.20.000004
ORF1ab/nsp1100S100TaGtaCt22B.1.6370.000146
ORF1ab/nsp1100S100delAGT---22N.40.008511
ORF1ab/nsp1100S100delAGT---22N.60.014184
ORF1ab/nsp1100S100delAGT---22P.20.000373
ORF1ab/nsp1100S100NaGtaAt110.055556
ORF1ab/nsp1100S100CAgtTgt110.055556
ORF1ab/nsp1100S100KaGTaAG110.055556
ORF1ab/nsp1100S100RagTagG110.055556
ORF1ab/nsp1100S100XAGTTAG110.055556
ORF1ab/nsp1100S100YAGtTAt110.055556
ORF1ab/nsp1100S100WAgTTgG110.055556
ORF1ab/nsp1100S100delAGT---11A0.000387
ORF1ab/nsp1100S100SagTagC11A.2.5.20.001572
ORF1ab/nsp1100S100GAgtGgt11AD.20.000219
ORF1ab/nsp1100S100XAGTTAG11All0
ORF1ab/nsp1100S100KaGTaAG11All0
ORF1ab/nsp1100S100HAGtCAt11All0
ORF1ab/nsp1100S100RagTagA11AY.1020.000027
ORF1ab/nsp1100S100RagTagA11AY.1030.000006
ORF1ab/nsp1100S100delAGT---11AY.1160.000287
ORF1ab/nsp1100S100SagTagC11AY.1170.000085
ORF1ab/nsp1100S100IaGtaTt11AY.1170.000085
ORF1ab/nsp1100S100GAgtGgt11AY.1170.000085
ORF1ab/nsp1100S100SagTagC11AY.1180.000063
ORF1ab/nsp1100S100NaGtaAt11AY.1180.000063
ORF1ab/nsp1100S100RAgtCgt11AY.1190.000035
ORF1ab/nsp1100S100IaGtaTt11AY.1190.000035
ORF1ab/nsp1100S100CAgtTgt11AY.1190.000035
ORF1ab/nsp1100S100delAGT---11AY.120.000316
ORF1ab/nsp1100S100GAgtGgt11AY.120.10.000321
ORF1ab/nsp1100S100GAgtGgt11AY.120.20.001285
ORF1ab/nsp1100S100CAgtTgt11AY.1210.000135
ORF1ab/nsp1100S100NaGtaAt11AY.130.000161
ORF1ab/nsp1100S100NaGtaAt11AY.140.000088
ORF1ab/nsp1100S100SagTagC11AY.140.000088
ORF1ab/nsp1100S100IaGtaTt11AY.160.00038
ORF1ab/nsp1100S100NaGtaAt11AY.16.10.00047
ORF1ab/nsp1100S100CAgtTgt11AY.190.00114
ORF1ab/nsp1100S100delAGT---11AY.190.00114
ORF1ab/nsp1100S100CAgtTgt11AY.200.000039
ORF1ab/nsp1100S100CAgTTgC11AY.230.00007
ORF1ab/nsp1100S100SagTagC11AY.230.00007
ORF1ab/nsp1100S100IaGtaTt11AY.250.000006
ORF1ab/nsp1100S100CAgtTgt11AY.250.000006
ORF1ab/nsp1100S100SagTagC11AY.260.000028
ORF1ab/nsp1100S100GAgtGgt11AY.270.000065
ORF1ab/nsp1100S100SagTagC11AY.290.000016
ORF1ab/nsp1100S100delAGT---11AY.30.00001
ORF1ab/nsp1100S100CAgtTgt11AY.3.10.000085
ORF1ab/nsp1100S100CAgtTgt11AY.340.000097
ORF1ab/nsp1100S100NaGtaAt11AY.340.000097
ORF1ab/nsp1100S100delAGT---11AY.380.000499
ORF1ab/nsp1100S100TaGtaCt11AY.390.000025
ORF1ab/nsp1100S100SagTagC11AY.39.10.00004
ORF1ab/nsp1100S100TaGtaCt11AY.40.000002
ORF1ab/nsp1100S100IaGtaTt11AY.4.2.10.000149
ORF1ab/nsp1100S100NaGtaAt11AY.410.000294
ORF1ab/nsp1100S100SagTagC11AY.420.00004
ORF1ab/nsp1100S100YAGTTAC11AY.430.000004
ORF1ab/nsp1100S100IaGtaTt11AY.430.000004
ORF1ab/nsp1100S100IaGtaTt11AY.440.000006
ORF1ab/nsp1100S100delAGT---11AY.440.000006
ORF1ab/nsp1100S100IaGtaTt11AY.460.000104
ORF1ab/nsp1100S100GAgtGgt11AY.460.000104
ORF1ab/nsp1100S100SagTagC11AY.470.000031
ORF1ab/nsp1100S100CAgtTgt11AY.50.000021
ORF1ab/nsp1100S100IaGtaTt11AY.50.000021
ORF1ab/nsp1100S100NaGtaAt11AY.50.000021
ORF1ab/nsp1100S100RagTagA11AY.510.000909
ORF1ab/nsp1100S100GAgtGgt11AY.520.000814
ORF1ab/nsp1100S100GAgtGgt11AY.530.000288
ORF1ab/nsp1100S100GAgtGgt11AY.540.000095
ORF1ab/nsp1100S100RAgtCgt11AY.580.000907
ORF1ab/nsp1100S100RagTagG11AY.60.000041
ORF1ab/nsp1100S100IaGtaTt11AY.600.000938
ORF1ab/nsp1100S100NaGtaAt11AY.610.000105
ORF1ab/nsp1100S100GAgtGgt11AY.620.000436
ORF1ab/nsp1100S100delAGT---11AY.650.000533
ORF1ab/nsp1100S100SagTagC11AY.690.000187
ORF1ab/nsp1100S100CAgtTgt11AY.7.20.000559
ORF1ab/nsp1100S100GAgtGgt11AY.740.000116
ORF1ab/nsp1100S100NaGtaAt11AY.75.10.00018
ORF1ab/nsp1100S100GAgtGgt11AY.75.10.00018
ORF1ab/nsp1100S100GAgtGgt11AY.770.001127
ORF1ab/nsp1100S100WAgTTgG11AY.80.000606
ORF1ab/nsp1100S100NaGtaAt11AY.820.001357
ORF1ab/nsp1100S100NaGtaAt11AY.850.000427
ORF1ab/nsp1100S100CAgtTgt11AY.870.000833
ORF1ab/nsp1100S100GAgtGgt11AY.90.000068
ORF1ab/nsp1100S100WAgTTgG11AY.90.000068
ORF1ab/nsp1100S100NaGtaAt11AY.9.10.000084
ORF1ab/nsp1100S100delAGT---11AY.9.10.000084
ORF1ab/nsp1100S100GAgtGgt11AY.9.20.000037
ORF1ab/nsp1100S100RagTagA11AY.910.00073
ORF1ab/nsp1100S100GAgtGgt11AY.920.000287
ORF1ab/nsp1100S100delAGT---11AY.950.000761
ORF1ab/nsp1100S100NaGtaAt11AY.950.000761
ORF1ab/nsp1100S100CAgtTgt11AY.980.000079
ORF1ab/nsp1100S100NaGtaAt11AY.98.10.000048
ORF1ab/nsp1100S100IaGtaTt11AY.98.10.000048
ORF1ab/nsp1100S100CAgtTgt11AY.99.10.001553
ORF1ab/nsp1100S100GAgtGgt11AY.99.20.000092
ORF1ab/nsp1100S100CAgtTgt11AY.99.20.000092
ORF1ab/nsp1100S100del1aGta-t11B.10.000009
ORF1ab/nsp1100S100delAGT---11B.10.000009
ORF1ab/nsp1100S100RagTagA11B.10.000009
ORF1ab/nsp1100S100SagTagC11B.10.000009
ORF1ab/nsp1100S100RagTagA11B.1.10.000018
ORF1ab/nsp1100S100IaGtaTt11B.1.10.000018
ORF1ab/nsp1100S100NaGtaAt11B.1.10.000018
ORF1ab/nsp1100S100NaGtaAt11B.1.1.10.000327
ORF1ab/nsp1100S100SagTagC11B.1.1.2070.001182
ORF1ab/nsp1100S100NaGtaAt11B.1.1.2140.000055
ORF1ab/nsp1100S100IaGtaTt11B.1.1.2220.000204
ORF1ab/nsp1100S100CAgtTgt11B.1.1.2730.006757
ORF1ab/nsp1100S100del1agTag-11B.1.1.3060.000438
ORF1ab/nsp1100S100NaGtaAt11B.1.1.3180.000302
ORF1ab/nsp1100S100RAgtCgt11B.1.1.3480.000796
ORF1ab/nsp1100S100GAgtGgt11B.1.1.5190.00004
ORF1ab/nsp1100S100del1Agt-gt11B.1.1.70.000001
ORF1ab/nsp1100S100del2AGt--t11B.1.1.70.000001
ORF1ab/nsp1100S100SagTagC11B.1.1180.006711
ORF1ab/nsp1100S100RagTagA11B.1.1600.000031
ORF1ab/nsp1100S100delAGT---11B.1.1770.000013
ORF1ab/nsp1100S100IaGtaTt11B.1.1770.000013
ORF1ab/nsp1100S100CAgtTgt11B.1.177.150.000631
ORF1ab/nsp1100S100SagTagC11B.1.177.170.000821
ORF1ab/nsp1100S100CAgtTgt11B.1.177.40.000211
ORF1ab/nsp1100S100RAgtCgt11B.1.177.40.000211
ORF1ab/nsp1100S100SagTagC11B.1.177.40.000211
ORF1ab/nsp1100S100delAGT---11B.1.177.430.001477
ORF1ab/nsp1100S100GAgtGgt11B.1.177.440.000519
ORF1ab/nsp1100S100delAGT---11B.1.177.540.000606
ORF1ab/nsp1100S100TaGtaCt11B.1.177.560.000668
ORF1ab/nsp1100S100delAGT---11B.1.177.570.000281
ORF1ab/nsp1100S100NaGtaAt11B.1.177.770.000726
ORF1ab/nsp1100S100delAGT---11B.1.1790.003759
ORF1ab/nsp1100S100del2AGt--t11B.1.20.000009
ORF1ab/nsp1100S100delAGT---11B.1.2110.025
ORF1ab/nsp1100S100NaGtaAt11B.1.2210.000071
ORF1ab/nsp1100S100SagTagC11B.1.2210.000071
ORF1ab/nsp1100S100NaGtaAt11B.1.2430.00007
ORF1ab/nsp1100S100RAgtCgt11B.1.2580.000067
ORF1ab/nsp1100S100GAgtGgt11B.1.258.170.000104
ORF1ab/nsp1100S100NaGtaAt11B.1.258.170.000104
ORF1ab/nsp1100S100CAgtTgt11B.1.258.170.000104
ORF1ab/nsp1100S100GAgtGgt11B.1.2650.001271
ORF1ab/nsp1100S100CAgtTgt11B.1.3490.000715
ORF1ab/nsp1100S100IaGtaTt11B.1.3510.00003
ORF1ab/nsp1100S100delAGT---11B.1.3510.00003
ORF1ab/nsp1100S100RAgtCgt11B.1.3510.00003
ORF1ab/nsp1100S100delAGT---11B.1.360.000146
ORF1ab/nsp1100S100IaGtaTt11B.1.36.180.00042
ORF1ab/nsp1100S100CAgtTgt11B.1.36.290.000517
ORF1ab/nsp1100S100SagTagC11B.1.36.360.000602
ORF1ab/nsp1100S100SagTagC11B.1.3670.000792
ORF1ab/nsp1100S100IaGtaTt11B.1.3670.000792
ORF1ab/nsp1100S100CAgtTgt11B.1.3990.001934
ORF1ab/nsp1100S100delAGT---11B.1.4270.00005
ORF1ab/nsp1100S100delAGT---11B.1.4290.000024
ORF1ab/nsp1100S100NaGtaAt11B.1.4330.003195
ORF1ab/nsp1100S100NaGtaAt11B.1.4360.001029
ORF1ab/nsp1100S100GAgtGgt11B.1.466.20.000391
ORF1ab/nsp1100S100CAgtTgt11B.1.5260.000024
ORF1ab/nsp1100S100RAgtCgt11B.1.5380.008065
ORF1ab/nsp1100S100SagTagC11B.1.5510.00129
ORF1ab/nsp1100S100HAGtCAt11B.1.5600.00463
ORF1ab/nsp1100S100IaGtaTt11B.1.5640.000426
ORF1ab/nsp1100S100IaGtaTt11B.1.5770.000687
ORF1ab/nsp1100S100delAGT---11B.1.5950.000261
ORF1ab/nsp1100S100WAgTTgG11B.1.5990.00365
ORF1ab/nsp1100S100CAgtTgt11B.1.5990.00365
ORF1ab/nsp1100S100RagTagG11B.1.5990.00365
ORF1ab/nsp1100S100del1Agt-gt11B.1.6060.006024
ORF1ab/nsp1100S100NaGtaAt11B.1.617.10.000129
ORF1ab/nsp1100S100GAgtGgt11B.1.840.020833
ORF1ab/nsp1100S100delAGT---11B.300.014706
ORF1ab/nsp1100S100delAGT---11C.170.055556
ORF1ab/nsp1100S100delAGT---11C.350.000774
ORF1ab/nsp1100S100GAgtGgt11C.350.000774
ORF1ab/nsp1100S100RAgtCgt11D.20.000075
ORF1ab/nsp1100S100CAgtTgt11G.10.041667
ORF1ab/nsp1100S100IaGtaTt11N.50.001767
ORF1ab/nsp1100S100GAgtGgt11P.10.000016
ORF1ab/nsp1100S100NaGtaAt11P.10.000016
ORF1ab/nsp1100S100GAgtGgt11P.1.100.000269
ORF1ab/nsp1100S100NaGtaAt11Q.80.000165