CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF10 : Mut = X39S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1039X39SnonsyntAgtCg34320.94117629672-29674
ORF1039X39SnonsynTAGAGT3410.029411829672-29674
ORF1039X39SnonsyntAGtCT3410.029411829672-29674

Details of the mutation X39S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1039X39StAgtCg3234All0.000006
ORF1039X39StAGtCT134All0
ORF1039X39STAGAGT134All0
ORF1039X39StAgtCg1515AY.1020.000398
ORF1039X39StAgtCg55AY.390.000124
ORF1039X39StAgtCg55AY.40.000008
ORF1039X39StAgtCg44B.1.617.20.000015
ORF1039X39StAgtCg13P.1.10.000318
ORF1039X39STAGAGT13P.1.10.000318
ORF1039X39StAGtCT13P.1.10.000318
ORF1039X39StAgtCg11AY.850.000427
ORF1039X39StAgtCg11B.1.2430.00007