CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF10 : Mut = R20del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1020R20del1delAga-ga2632600.98859329615-29617
ORF1020R20del1delaGaa-a26320.0076045629615-29617
ORF1020R20del1delagAag-26310.0038022829615-29617

Details of the mutation R20del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1020R20del1Aga-ga260263All0.00005
ORF1020R20del1aGaa-a2263All0
ORF1020R20del1agAag-1263All0
ORF1020R20del1Aga-ga5656AY.250.000337
ORF1020R20del1Aga-ga3434AY.440.000207
ORF1020R20del1Aga-ga2424AY.1030.000149
ORF1020R20del1Aga-ga2222AY.30.000219
ORF1020R20del1Aga-ga2222B.1.617.20.000083
ORF1020R20del1Aga-ga1313AY.370.004109
ORF1020R20del1Aga-ga1111AY.1190.000388
ORF1020R20del1Aga-ga1111AY.260.000311
ORF1020R20del1Aga-ga1010AY.480.004651
ORF1020R20del1Aga-ga77AY.99.20.000645
ORF1020R20del1Aga-ga66AY.200.000233
ORF1020R20del1Aga-ga44AY.1140.000924
ORF1020R20del1Aga-ga44AY.470.000124
ORF1020R20del1Aga-ga44AY.750.000224
ORF1020R20del1Aga-ga23AY.40.000003
ORF1020R20del1agAag-13AY.40.000002
ORF1020R20del1Aga-ga33AY.430.000013
ORF1020R20del1Aga-ga33AY.46.10.00308
ORF1020R20del1Aga-ga33AY.540.000286
ORF1020R20del1Aga-ga33AY.740.000347
ORF1020R20del1Aga-ga22AY.1000.000092
ORF1020R20del1Aga-ga22AY.1070.000932
ORF1020R20del1Aga-ga11AY.10.000396
ORF1020R20del1Aga-ga11AY.1130.000142
ORF1020R20del1Aga-ga11AY.116.10.000311
ORF1020R20del1Aga-ga11AY.1180.000063
ORF1020R20del1Aga-ga11AY.190.00114
ORF1020R20del1Aga-ga11AY.3.10.000085
ORF1020R20del1Aga-ga11AY.390.000025
ORF1020R20del1Aga-ga11AY.46.60.000072
ORF1020R20del1Aga-ga11AY.50.000021
ORF1020R20del1Aga-ga11AY.90.000068
ORF1020R20del1Aga-ga11AY.9.20.000037
ORF1020R20del1Aga-ga11B.1.1.70.000001
ORF1020R20del1aGaa-a11B.1.20.000009
ORF1020R20del1aGaa-a11B.1.5950.000261
ORF1020R20del1Aga-ga11B.1.6210.000089
ORF1020R20del1Aga-ga11B.1.6280.000352