CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF10 : Mut = R20R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1020R20RsynagAagG6936700.96681129615-29617
ORF1020R20RsynAgaCga693230.03318929615-29617

Details of the mutation R20R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1020R20RagAagG670693All0.000128
ORF1020R20RAgaCga23693All0.000004
ORF1020R20RagAagG389389B.1.2350.979849
ORF1020R20RagAagG9999B.1.1.70.000089
ORF1020R20RagAagG3131B.1.1.2140.001719
ORF1020R20RagAagG2121AY.30.000209
ORF1020R20RagAagG2020B.1.5610.00794
ORF1020R20RagAagG1414B.1.2580.000932
ORF1020R20RAgaCga911AY.250.000054
ORF1020R20RagAagG211AY.250.000012
ORF1020R20RagAagG1011AY.40.000016
ORF1020R20RAgaCga111AY.40.000002
ORF1020R20RagAagG79B.10.000064
ORF1020R20RAgaCga29B.10.000018
ORF1020R20RagAagG88B.1.10.000145
ORF1020R20RagAagG88B.1.1770.000105
ORF1020R20RagAagG77AY.1030.000043
ORF1020R20RagAagG66B.1.2060.004894
ORF1020R20RagAagG66B.1.4270.000303
ORF1020R20RagAagG55AY.260.000142
ORF1020R20RAgaCga44AY.1000.000184
ORF1020R20RAgaCga44B.1.1600.000125
ORF1020R20RagAagG33AY.430.000013
ORF1020R20RagAagG33B.1.617.20.000011
ORF1020R20RagAagG33P.10.000047
ORF1020R20RagAagG12AY.440.000006
ORF1020R20RAgaCga12AY.440.000006
ORF1020R20RagAagG22AY.50.000041
ORF1020R20RagAagG22AY.660.002139
ORF1020R20RagAagG22AY.750.000112
ORF1020R20RagAagG22B.1.1.1700.002494
ORF1020R20RagAagG22B.1.1.1890.003026
ORF1020R20RagAagG22B.1.2790.001027
ORF1020R20RagAagG11A.10.000282
ORF1020R20RagAagG11AY.1020.000027
ORF1020R20RagAagG11AY.140.000088
ORF1020R20RagAagG11AY.200.000039
ORF1020R20RagAagG11AY.290.000016
ORF1020R20RagAagG11AY.450.000122
ORF1020R20RAgaCga11B.1.1.3180.000302
ORF1020R20RagAagG11B.1.1.5190.00004
ORF1020R20RagAagG11B.1.1110.001175
ORF1020R20RagAagG11B.1.177.430.001477
ORF1020R20RAgaCga11B.1.20.000009
ORF1020R20RagAagG11B.1.2210.000071
ORF1020R20RagAagG11B.1.2430.00007
ORF1020R20RagAagG11B.1.5260.000024
ORF1020R20RagAagG11B.1.621.10.000506
ORF1020R20RagAagG11B.1.6370.000073
ORF1020R20RagAagG11Q.80.000165