CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF10 | 24 | R24C | nonsyn | Cgt | Tgt | 7571 | 7571 | 1 | 29627-29629 | |
ORF10 | 24 | R24L | nonsyn | cGt | cTt | 3880 | 3880 | 1 | 29627-29629 | |
ORF10 | 24 | R24H | nonsyn | cGt | cAt | 2058 | 2058 | 1 | 29627-29629 | |
ORF10 | 24 | R24P | nonsyn | cGt | cCt | 235 | 235 | 1 | 29627-29629 | |
ORF10 | 24 | R24R | syn | cgT | cgC | 99 | 93 | 0.939394 | 29627-29629 | |
ORF10 | 24 | R24R | syn | cgT | cgA | 99 | 3 | 0.030303 | 29627-29629 | |
ORF10 | 24 | R24R | syn | cgT | cgG | 99 | 3 | 0.030303 | 29627-29629 | |
ORF10 | 24 | R24S | nonsyn | Cgt | Agt | 98 | 97 | 0.989796 | 29627-29629 | |
ORF10 | 24 | R24S | nonsyn | CGT | TCC | 98 | 1 | 0.0102041 | 29627-29629 | |
ORF10 | 24 | R24del | del | CGT | --- | 31 | 31 | 1 | 29627-29629 | |
ORF10 | 24 | R24G | nonsyn | Cgt | Ggt | 22 | 22 | 1 | 29627-29629 | |
ORF10 | 24 | R24F | nonsyn | CGt | TTt | 6 | 4 | 0.666667 | 29627-29629 | |
ORF10 | 24 | R24F | nonsyn | CGT | TTC | 6 | 2 | 0.333333 | 29627-29629 | |
ORF10 | 24 | R24del1 | del | Cgt | -gt | 4 | 4 | 1 | 29627-29629 | |
ORF10 | 24 | R24V | nonsyn | CGT | GTA | 4 | 4 | 1 | 29627-29629 | |
ORF10 | 24 | R24W | nonsyn | CgT | TgG | 2 | 2 | 1 | 29627-29629 | |
ORF10 | 24 | R24I | nonsyn | CGT | ATA | 1 | 1 | 1 | 29627-29629 | |
ORF10 | 24 | R24Q | nonsyn | cGT | cAA | 1 | 1 | 1 | 29627-29629 | |
ORF10 | 24 | R24N | nonsyn | CGT | AAC | 1 | 1 | 1 | 29627-29629 | |
ORF10 | 24 | R24del2 | del | cGT | c-- | 1 | 1 | 1 | 29627-29629 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF10 | 24 | R24C | Cgt | Tgt | 7571 | 7571 | All | 0.001448 |
ORF10 | 24 | R24L | cGt | cTt | 3880 | 3880 | All | 0.000742 |
ORF10 | 24 | R24H | cGt | cAt | 2058 | 2058 | All | 0.000394 |
ORF10 | 24 | R24C | Cgt | Tgt | 1862 | 1862 | B.1.1.7 | 0.001667 |
ORF10 | 24 | R24H | cGt | cAt | 802 | 802 | AY.43 | 0.003553 |
ORF10 | 24 | R24C | Cgt | Tgt | 541 | 541 | AY.4 | 0.000842 |
ORF10 | 24 | R24L | cGt | cTt | 505 | 505 | B.1.1.7 | 0.000452 |
ORF10 | 24 | R24C | Cgt | Tgt | 492 | 492 | AY.120.1 | 0.157945 |
ORF10 | 24 | R24L | cGt | cTt | 462 | 462 | B.1.516 | 0.90411 |
ORF10 | 24 | R24H | cGt | cAt | 412 | 412 | AY.106 | 0.137977 |
ORF10 | 24 | R24L | cGt | cTt | 399 | 399 | AY.37 | 0.126106 |
ORF10 | 24 | R24L | cGt | cTt | 357 | 357 | AY.43 | 0.001582 |
ORF10 | 24 | R24C | Cgt | Tgt | 356 | 356 | AY.44 | 0.002167 |
ORF10 | 24 | R24C | Cgt | Tgt | 332 | 332 | P.1.4 | 0.324219 |
ORF10 | 24 | R24L | cGt | cTt | 323 | 323 | AY.4 | 0.000503 |
ORF10 | 24 | R24P | cGt | cCt | 235 | 235 | All | 0.000045 |
ORF10 | 24 | R24C | Cgt | Tgt | 233 | 233 | AY.43 | 0.001032 |
ORF10 | 24 | R24L | cGt | cTt | 228 | 228 | AY.103 | 0.001416 |
ORF10 | 24 | R24C | Cgt | Tgt | 221 | 221 | P.1 | 0.003482 |
ORF10 | 24 | R24C | Cgt | Tgt | 217 | 217 | AY.29 | 0.003423 |
ORF10 | 24 | R24H | cGt | cAt | 173 | 173 | AY.103 | 0.001074 |
ORF10 | 24 | R24C | Cgt | Tgt | 170 | 170 | B.1.626 | 0.971429 |
ORF10 | 24 | R24C | Cgt | Tgt | 141 | 141 | B.1.617.2 | 0.000531 |
ORF10 | 24 | R24C | Cgt | Tgt | 136 | 136 | B.1.234 | 0.017944 |
ORF10 | 24 | R24C | Cgt | Tgt | 135 | 135 | AY.117 | 0.01141 |
ORF10 | 24 | R24C | Cgt | Tgt | 133 | 133 | B.1.2 | 0.001171 |
ORF10 | 24 | R24C | Cgt | Tgt | 132 | 132 | AY.23 | 0.009207 |
ORF10 | 24 | R24L | cGt | cTt | 110 | 110 | B.1.177.21 | 0.008412 |
ORF10 | 24 | R24C | Cgt | Tgt | 103 | 103 | AY.26 | 0.002916 |
ORF10 | 24 | R24C | Cgt | Tgt | 102 | 102 | B.1.1 | 0.00185 |
ORF10 | 24 | R24L | cGt | cTt | 101 | 101 | AY.3 | 0.001005 |
ORF10 | 24 | R24C | Cgt | Tgt | 100 | 100 | B.1.632 | 0.671141 |
ORF10 | 24 | R24R | cgT | cgC | 93 | 99 | All | 0.000018 |
ORF10 | 24 | R24R | cgT | cgG | 3 | 99 | All | 0.000001 |
ORF10 | 24 | R24R | cgT | cgA | 3 | 99 | All | 0.000001 |
ORF10 | 24 | R24S | Cgt | Agt | 97 | 98 | All | 0.000019 |
ORF10 | 24 | R24S | CGT | TCC | 1 | 98 | All | 0 |
ORF10 | 24 | R24L | cGt | cTt | 95 | 95 | AY.44 | 0.000578 |
ORF10 | 24 | R24L | cGt | cTt | 94 | 94 | AY.12 | 0.029709 |
ORF10 | 24 | R24C | Cgt | Tgt | 93 | 93 | AY.25 | 0.000559 |
ORF10 | 24 | R24L | cGt | cTt | 93 | 93 | B.1.177.38 | 0.96875 |
ORF10 | 24 | R24L | cGt | cTt | 85 | 85 | B.1.617.2 | 0.00032 |
ORF10 | 24 | R24C | Cgt | Tgt | 82 | 82 | B.1.349 | 0.058613 |
ORF10 | 24 | R24P | cGt | cCt | 81 | 81 | B.1.617.2 | 0.000305 |
ORF10 | 24 | R24C | Cgt | Tgt | 77 | 77 | B.1.443 | 0.359813 |
ORF10 | 24 | R24C | Cgt | Tgt | 75 | 75 | AY.3 | 0.000746 |
ORF10 | 24 | R24C | Cgt | Tgt | 75 | 75 | B.1 | 0.000687 |
ORF10 | 24 | R24L | cGt | cTt | 72 | 72 | B.1.1.316 | 0.066605 |
ORF10 | 24 | R24H | cGt | cAt | 70 | 70 | B.1.617.2 | 0.000264 |
ORF10 | 24 | R24P | cGt | cCt | 68 | 68 | AY.102 | 0.001803 |
ORF10 | 24 | R24C | Cgt | Tgt | 68 | 68 | B.1.526 | 0.001598 |
ORF10 | 24 | R24C | Cgt | Tgt | 66 | 66 | B.1.160 | 0.002058 |
ORF10 | 24 | R24H | cGt | cAt | 65 | 65 | B.1.1.7 | 0.000058 |
ORF10 | 24 | R24C | Cgt | Tgt | 63 | 63 | B.1.177 | 0.00083 |
ORF10 | 24 | R24L | cGt | cTt | 63 | 63 | P.1 | 0.000993 |
ORF10 | 24 | R24C | Cgt | Tgt | 61 | 61 | AY.39 | 0.001507 |
ORF10 | 24 | R24H | cGt | cAt | 59 | 59 | AY.4 | 0.000092 |
ORF10 | 24 | R24C | Cgt | Tgt | 56 | 56 | AY.103 | 0.000348 |
ORF10 | 24 | R24L | cGt | cTt | 56 | 56 | AY.25 | 0.000337 |
ORF10 | 24 | R24C | Cgt | Tgt | 56 | 56 | B.1.1.338 | 0.965517 |
ORF10 | 24 | R24C | Cgt | Tgt | 54 | 54 | B.1.427 | 0.002727 |
ORF10 | 24 | R24L | cGt | cTt | 50 | 50 | AY.26 | 0.001416 |
ORF10 | 24 | R24L | cGt | cTt | 49 | 49 | P.1.12 | 0.023717 |
ORF10 | 24 | R24C | Cgt | Tgt | 41 | 41 | B.1.1.519 | 0.001628 |
ORF10 | 24 | R24L | cGt | cTt | 41 | 41 | B.1.1.519 | 0.001628 |
ORF10 | 24 | R24H | cGt | cAt | 41 | 41 | B.1.258 | 0.002728 |
ORF10 | 24 | R24C | Cgt | Tgt | 40 | 40 | AY.4.2 | 0.000868 |
ORF10 | 24 | R24C | Cgt | Tgt | 38 | 38 | AY.5 | 0.000785 |
ORF10 | 24 | R24L | cGt | cTt | 38 | 38 | B.1 | 0.000348 |
ORF10 | 24 | R24C | Cgt | Tgt | 38 | 38 | B.1.429 | 0.000894 |
ORF10 | 24 | R24H | cGt | cAt | 37 | 37 | B.1.36.31 | 0.064799 |
ORF10 | 24 | R24C | Cgt | Tgt | 36 | 36 | B.1.1.294 | 0.04557 |
ORF10 | 24 | R24H | cGt | cAt | 35 | 35 | AY.25 | 0.000211 |
ORF10 | 24 | R24L | cGt | cTt | 32 | 32 | B.1.2 | 0.000282 |
ORF10 | 24 | R24del | CGT | --- | 31 | 31 | All | 0.000006 |
ORF10 | 24 | R24C | Cgt | Tgt | 30 | 30 | AY.121 | 0.00406 |
ORF10 | 24 | R24L | cGt | cTt | 30 | 30 | B.1.1 | 0.000544 |
ORF10 | 24 | R24C | Cgt | Tgt | 29 | 29 | B.1.561 | 0.011513 |
ORF10 | 24 | R24C | Cgt | Tgt | 28 | 28 | B.1.396 | 0.01976 |
ORF10 | 24 | R24H | cGt | cAt | 27 | 27 | AY.44 | 0.000164 |
ORF10 | 24 | R24L | cGt | cTt | 26 | 26 | AY.6 | 0.001069 |
ORF10 | 24 | R24C | Cgt | Tgt | 26 | 26 | B.1.438.1 | 0.002789 |
ORF10 | 24 | R24C | Cgt | Tgt | 25 | 25 | B.1.596 | 0.002178 |
ORF10 | 24 | R24C | Cgt | Tgt | 25 | 25 | C.37 | 0.002902 |
ORF10 | 24 | R24S | Cgt | Agt | 24 | 24 | AY.43 | 0.000106 |
ORF10 | 24 | R24C | Cgt | Tgt | 24 | 24 | B.1.258 | 0.001597 |
ORF10 | 24 | R24G | Cgt | Ggt | 22 | 22 | All | 0.000004 |
ORF10 | 24 | R24C | Cgt | Tgt | 22 | 22 | AY.102 | 0.000583 |
ORF10 | 24 | R24L | cGt | cTt | 22 | 22 | AY.119 | 0.000777 |
ORF10 | 24 | R24C | Cgt | Tgt | 21 | 21 | B.1.1.192 | 0.048499 |
ORF10 | 24 | R24H | cGt | cAt | 20 | 20 | AY.3 | 0.000199 |
ORF10 | 24 | R24C | Cgt | Tgt | 20 | 20 | AY.75 | 0.00112 |
ORF10 | 24 | R24L | cGt | cTt | 20 | 20 | B.1.149 | 0.068493 |
ORF10 | 24 | R24L | cGt | cTt | 19 | 19 | AY.101 | 0.009318 |
ORF10 | 24 | R24L | cGt | cTt | 19 | 19 | AY.102 | 0.000504 |
ORF10 | 24 | R24H | cGt | cAt | 19 | 19 | AY.39 | 0.00047 |
ORF10 | 24 | R24C | Cgt | Tgt | 19 | 19 | AY.42 | 0.000764 |
ORF10 | 24 | R24C | Cgt | Tgt | 19 | 19 | AY.81 | 0.037849 |
ORF10 | 24 | R24H | cGt | cAt | 19 | 19 | B.1.2 | 0.000167 |
ORF10 | 24 | R24L | cGt | cTt | 19 | 19 | B.1.429 | 0.000447 |
ORF10 | 24 | R24C | Cgt | Tgt | 19 | 19 | P.1.17 | 0.003073 |
ORF10 | 24 | R24H | cGt | cAt | 18 | 18 | AY.102 | 0.000477 |
ORF10 | 24 | R24H | cGt | cAt | 18 | 18 | AY.34 | 0.001745 |
ORF10 | 24 | R24C | Cgt | Tgt | 18 | 18 | AY.47 | 0.00056 |
ORF10 | 24 | R24C | Cgt | Tgt | 18 | 18 | Q.1 | 0.002274 |
ORF10 | 24 | R24C | Cgt | Tgt | 17 | 17 | AY.20 | 0.000661 |
ORF10 | 24 | R24L | cGt | cTt | 17 | 17 | B.1.1.128 | 0.120567 |
ORF10 | 24 | R24R | cgT | cgC | 17 | 17 | B.1.617.2 | 0.000064 |
ORF10 | 24 | R24C | Cgt | Tgt | 16 | 16 | AY.118 | 0.001002 |
ORF10 | 24 | R24L | cGt | cTt | 16 | 16 | AY.20 | 0.000622 |
ORF10 | 24 | R24C | Cgt | Tgt | 16 | 16 | B.1.1.397 | 0.036036 |
ORF10 | 24 | R24C | Cgt | Tgt | 16 | 16 | B.1.564 | 0.006814 |
ORF10 | 24 | R24H | cGt | cAt | 16 | 16 | B.1.637 | 0.001169 |
ORF10 | 24 | R24P | cGt | cCt | 15 | 15 | B.1 | 0.000137 |
ORF10 | 24 | R24C | Cgt | Tgt | 15 | 15 | B.1.433 | 0.047923 |
ORF10 | 24 | R24H | cGt | cAt | 14 | 14 | AY.29 | 0.000221 |
ORF10 | 24 | R24L | cGt | cTt | 14 | 14 | AY.33 | 0.000935 |
ORF10 | 24 | R24L | cGt | cTt | 14 | 14 | AY.39 | 0.000346 |
ORF10 | 24 | R24C | Cgt | Tgt | 14 | 14 | AY.45 | 0.001704 |
ORF10 | 24 | R24C | Cgt | Tgt | 14 | 14 | AY.54 | 0.001335 |
ORF10 | 24 | R24S | Cgt | Agt | 14 | 14 | B.1.1.7 | 0.000013 |
ORF10 | 24 | R24R | cgT | cgC | 14 | 14 | B.1.1.7 | 0.000013 |
ORF10 | 24 | R24C | Cgt | Tgt | 14 | 14 | B.1.351 | 0.000416 |
ORF10 | 24 | R24L | cGt | cTt | 14 | 14 | P.1.14 | 0.000669 |
ORF10 | 24 | R24H | cGt | cAt | 13 | 13 | AY.100 | 0.000598 |
ORF10 | 24 | R24C | Cgt | Tgt | 13 | 13 | AY.119 | 0.000459 |
ORF10 | 24 | R24C | Cgt | Tgt | 13 | 13 | AY.14 | 0.001144 |
ORF10 | 24 | R24S | Cgt | Agt | 13 | 13 | AY.25 | 0.000078 |
ORF10 | 24 | R24G | Cgt | Ggt | 13 | 13 | AY.3.1 | 0.001108 |
ORF10 | 24 | R24C | Cgt | Tgt | 13 | 13 | B.36 | 1 |
ORF10 | 24 | R24C | Cgt | Tgt | 12 | 12 | AY.4.4 | 0.00491 |
ORF10 | 24 | R24P | cGt | cCt | 12 | 12 | AY.43 | 0.000053 |
ORF10 | 24 | R24H | cGt | cAt | 11 | 11 | AY.6 | 0.000452 |
ORF10 | 24 | R24C | Cgt | Tgt | 11 | 11 | AY.74 | 0.001272 |
ORF10 | 24 | R24L | cGt | cTt | 11 | 11 | AY.99.2 | 0.001014 |
ORF10 | 24 | R24P | cGt | cCt | 11 | 11 | B.1.1.253 | 0.027569 |
ORF10 | 24 | R24C | Cgt | Tgt | 11 | 11 | B.1.36 | 0.001605 |
ORF10 | 24 | R24L | cGt | cTt | 11 | 11 | L.2 | 0.125 |
ORF10 | 24 | R24C | Cgt | Tgt | 11 | 11 | R.1 | 0.00099 |
ORF10 | 24 | R24R | cgT | cgC | 10 | 10 | AY.100 | 0.00046 |
ORF10 | 24 | R24L | cGt | cTt | 10 | 10 | AY.34 | 0.00097 |
ORF10 | 24 | R24C | Cgt | Tgt | 10 | 10 | AY.46.4 | 0.001645 |
ORF10 | 24 | R24C | Cgt | Tgt | 10 | 10 | B.1.240 | 0.002156 |
ORF10 | 24 | R24C | Cgt | Tgt | 9 | 9 | AY.100 | 0.000414 |
ORF10 | 24 | R24H | cGt | cAt | 9 | 9 | AY.120 | 0.000335 |
ORF10 | 24 | R24C | Cgt | Tgt | 9 | 9 | AY.13 | 0.001449 |
ORF10 | 24 | R24L | cGt | cTt | 9 | 9 | AY.94 | 0.003984 |
ORF10 | 24 | R24H | cGt | cAt | 9 | 9 | B.1 | 0.000082 |
ORF10 | 24 | R24L | cGt | cTt | 9 | 9 | B.1.1.222 | 0.001836 |
ORF10 | 24 | R24C | Cgt | Tgt | 9 | 9 | B.1.1.307 | 0.022785 |
ORF10 | 24 | R24C | Cgt | Tgt | 9 | 9 | B.1.1.354 | 0.039474 |
ORF10 | 24 | R24C | Cgt | Tgt | 9 | 9 | B.1.221 | 0.000639 |
ORF10 | 24 | R24C | Cgt | Tgt | 9 | 9 | B.1.243 | 0.000626 |
ORF10 | 24 | R24H | cGt | cAt | 9 | 9 | B.1.587 | 0.017078 |
ORF10 | 24 | R24L | cGt | cTt | 8 | 8 | AY.46.1 | 0.008214 |
ORF10 | 24 | R24H | cGt | cAt | 8 | 8 | AY.5 | 0.000165 |
ORF10 | 24 | R24L | cGt | cTt | 8 | 8 | B.1.1.311 | 0.002865 |
ORF10 | 24 | R24C | Cgt | Tgt | 8 | 8 | B.1.177.81 | 0.001515 |
ORF10 | 24 | R24L | cGt | cTt | 8 | 8 | B.1.408 | 0.02952 |
ORF10 | 24 | R24C | Cgt | Tgt | 8 | 8 | B.1.621 | 0.000708 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | AY.100 | 0.000322 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | AY.11 | 0.009371 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | AY.27 | 0.000453 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | AY.29 | 0.00011 |
ORF10 | 24 | R24H | cGt | cAt | 7 | 7 | AY.36 | 0.001037 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | AY.39.1 | 0.000277 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | AY.46 | 0.000729 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | AY.5 | 0.000145 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | AY.79 | 0.008475 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | B.1.232 | 0.003761 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | B.1.351 | 0.000208 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | B.1.36.29 | 0.003621 |
ORF10 | 24 | R24C | Cgt | Tgt | 7 | 7 | B.1.617.1 | 0.000903 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | B.1.617.1 | 0.000903 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | C.36.3 | 0.003971 |
ORF10 | 24 | R24L | cGt | cTt | 7 | 7 | C.37 | 0.000812 |
ORF10 | 24 | R24F | CGt | TTt | 4 | 6 | All | 0.000001 |
ORF10 | 24 | R24F | CGT | TTC | 2 | 6 | All | 0 |
ORF10 | 24 | R24H | cGt | cAt | 6 | 6 | AY.118 | 0.000376 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | AY.120 | 0.000223 |
ORF10 | 24 | R24P | cGt | cCt | 6 | 6 | AY.4 | 0.000009 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | AY.65 | 0.003198 |
ORF10 | 24 | R24L | cGt | cTt | 6 | 6 | AY.98 | 0.000474 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | B.1.1.297 | 0.013423 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | B.1.1.486 | 0.009464 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | B.1.369 | 0.001711 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | B.1.525 | 0.000679 |
ORF10 | 24 | R24L | cGt | cTt | 6 | 6 | B.1.526 | 0.000141 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | B.1.627 | 0.012121 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | C.35 | 0.004644 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | D.2 | 0.00045 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | P.1.1 | 0.001906 |
ORF10 | 24 | R24C | Cgt | Tgt | 6 | 6 | P.1.14 | 0.000287 |
ORF10 | 24 | R24L | cGt | cTt | 6 | 6 | Q.8 | 0.000989 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.101 | 0.002452 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.113 | 0.000712 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | AY.117 | 0.000423 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | AY.120 | 0.000186 |
ORF10 | 24 | R24H | cGt | cAt | 5 | 5 | AY.16 | 0.001898 |
ORF10 | 24 | R24P | cGt | cCt | 5 | 5 | AY.25 | 0.00003 |
ORF10 | 24 | R24H | cGt | cAt | 5 | 5 | AY.26 | 0.000142 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | AY.27 | 0.000324 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.29.1 | 0.001103 |
ORF10 | 24 | R24R | cgT | cgC | 5 | 5 | AY.4 | 0.000008 |
ORF10 | 24 | R24H | cGt | cAt | 5 | 5 | AY.42 | 0.000201 |
ORF10 | 24 | R24R | cgT | cgC | 5 | 5 | AY.43 | 0.000022 |
ORF10 | 24 | R24H | cGt | cAt | 5 | 5 | AY.47 | 0.000156 |
ORF10 | 24 | R24P | cGt | cCt | 5 | 5 | AY.5 | 0.000103 |
ORF10 | 24 | R24S | Cgt | Agt | 5 | 5 | AY.5 | 0.000103 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | AY.5.4 | 0.001384 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.61 | 0.000524 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.64 | 0.002976 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | AY.75 | 0.00028 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.98 | 0.000395 |
ORF10 | 24 | R24H | cGt | cAt | 5 | 5 | AY.98.1 | 0.000242 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | AY.99.2 | 0.000461 |
ORF10 | 24 | R24S | Cgt | Agt | 5 | 5 | B.1 | 0.000046 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | B.1.1.214 | 0.000277 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | B.1.1.253 | 0.012531 |
ORF10 | 24 | R24H | cGt | cAt | 5 | 5 | B.1.177 | 0.000066 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | B.1.241 | 0.004058 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | B.1.258 | 0.000333 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | B.1.551 | 0.006452 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | B.1.564 | 0.002129 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | B.1.595 | 0.001305 |
ORF10 | 24 | R24L | cGt | cTt | 5 | 5 | B.1.596 | 0.000436 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | B.1.637 | 0.000365 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | P.2 | 0.000933 |
ORF10 | 24 | R24C | Cgt | Tgt | 5 | 5 | Q.3 | 0.000725 |
ORF10 | 24 | R24del1 | Cgt | -gt | 4 | 4 | All | 0.000001 |
ORF10 | 24 | R24V | CGT | GTA | 4 | 4 | All | 0.000001 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.121 | 0.000541 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.13 | 0.000644 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.23 | 0.000279 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | AY.3.1 | 0.000341 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | AY.36 | 0.000593 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.39.1 | 0.000158 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.4.2.1 | 0.000596 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | AY.4.4 | 0.001637 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.42 | 0.000161 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | AY.53 | 0.00115 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | AY.61 | 0.000419 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | AY.63 | 0.001547 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | AY.75.1 | 0.000721 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | AY.9 | 0.00027 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | AY.98 | 0.000316 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | B | 0.000511 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | B.1.1 | 0.000073 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | B.1.1.214 | 0.000222 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.1.306 | 0.001754 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.1.37 | 0.000771 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.1.412 | 0.030534 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | B.1.177 | 0.000053 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.177.44 | 0.002076 |
ORF10 | 24 | R24del | CGT | --- | 4 | 4 | B.1.2 | 0.000035 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.210 | 0.008529 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | B.1.243 | 0.000278 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.258.17 | 0.000416 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | B.1.351 | 0.000119 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.36.37 | 0.011111 |
ORF10 | 24 | R24S | Cgt | Agt | 4 | 4 | B.1.411 | 0.014815 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | B.1.466.2 | 0.001565 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.470 | 0.005618 |
ORF10 | 24 | R24L | cGt | cTt | 4 | 4 | B.1.558 | 0.018265 |
ORF10 | 24 | R24H | cGt | cAt | 4 | 4 | B.1.560 | 0.018519 |
ORF10 | 24 | R24R | cgT | cgC | 4 | 4 | B.1.617.1 | 0.000516 |
ORF10 | 24 | R24S | Cgt | Agt | 4 | 4 | B.1.617.2 | 0.000015 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.623 | 0.002146 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | B.1.628 | 0.001409 |
ORF10 | 24 | R24R | cgT | cgC | 4 | 4 | C.16 | 0.004242 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | C.36 | 0.003643 |
ORF10 | 24 | R24C | Cgt | Tgt | 4 | 4 | P.1.15 | 0.000929 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | A | 0.001161 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | A.23.1 | 0.002113 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.105 | 0.001929 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | AY.106 | 0.001005 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.107 | 0.001398 |
ORF10 | 24 | R24H | cGt | cAt | 3 | 3 | AY.114 | 0.000693 |
ORF10 | 24 | R24H | cGt | cAt | 3 | 3 | AY.119 | 0.000106 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.16 | 0.001139 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.31 | 0.055556 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.33 | 0.0002 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | AY.36 | 0.000445 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.37 | 0.000948 |
ORF10 | 24 | R24P | cGt | cCt | 3 | 3 | AY.39 | 0.000074 |
ORF10 | 24 | R24S | Cgt | Agt | 3 | 3 | AY.4 | 0.000005 |
ORF10 | 24 | R24P | cGt | cCt | 3 | 3 | AY.44 | 0.000018 |
ORF10 | 24 | R24R | cgT | cgC | 3 | 3 | AY.44 | 0.000018 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | AY.45 | 0.000365 |
ORF10 | 24 | R24P | cGt | cCt | 3 | 3 | AY.46 | 0.000312 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.55 | 0.002752 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.75.1 | 0.000541 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | AY.9.1 | 0.000251 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B | 0.000383 |
ORF10 | 24 | R24del | CGT | --- | 3 | 3 | B.1 | 0.000027 |
ORF10 | 24 | R24R | cgT | cgC | 2 | 3 | B.1 | 0.000018 |
ORF10 | 24 | R24R | cgT | cgG | 1 | 3 | B.1 | 0.000009 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.1.170 | 0.003741 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.1.318 | 0.000905 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.1.39 | 0.001529 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.1.434 | 0.001046 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.1.63 | 0.001157 |
ORF10 | 24 | R24S | Cgt | Agt | 3 | 3 | B.1.2 | 0.000026 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.206 | 0.002447 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.213 | 0.044776 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.221 | 0.000213 |
ORF10 | 24 | R24R | cgT | cgC | 3 | 3 | B.1.351 | 0.000089 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.36 | 0.000438 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.36.37 | 0.008333 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.400 | 0.001287 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.427 | 0.000151 |
ORF10 | 24 | R24P | cGt | cCt | 3 | 3 | B.1.427 | 0.000151 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.437 | 0.0625 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | B.1.565 | 0.002431 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.575 | 0.00091 |
ORF10 | 24 | R24H | cGt | cAt | 3 | 3 | B.1.577 | 0.002062 |
ORF10 | 24 | R24H | cGt | cAt | 3 | 3 | B.1.595 | 0.000783 |
ORF10 | 24 | R24H | cGt | cAt | 3 | 3 | B.1.609 | 0.001438 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | B.1.93 | 0.002801 |
ORF10 | 24 | R24H | cGt | cAt | 3 | 3 | P.1 | 0.000047 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | P.1.2 | 0.003468 |
ORF10 | 24 | R24C | Cgt | Tgt | 3 | 3 | Q.8 | 0.000495 |
ORF10 | 24 | R24G | Cgt | Ggt | 3 | 3 | R.1 | 0.00027 |
ORF10 | 24 | R24L | cGt | cTt | 3 | 3 | R.1 | 0.00027 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | A.23 | 0.021053 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | A.23.1 | 0.001408 |
ORF10 | 24 | R24W | CgT | TgG | 2 | 2 | All | 0 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.108 | 0.002205 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.109 | 0.001479 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.109 | 0.001479 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.111 | 0.000366 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.116 | 0.000574 |
ORF10 | 24 | R24P | cGt | cCt | 2 | 2 | AY.117 | 0.000169 |
ORF10 | 24 | R24R | cgT | cgG | 1 | 2 | AY.117 | 0.000085 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 2 | AY.117 | 0.000085 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.120.2.1 | 0.000997 |
ORF10 | 24 | R24S | Cgt | Agt | 2 | 2 | AY.121 | 0.000271 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | AY.14 | 0.000176 |
ORF10 | 24 | R24P | cGt | cCt | 2 | 2 | AY.20 | 0.000078 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | AY.20 | 0.000078 |
ORF10 | 24 | R24P | cGt | cCt | 2 | 2 | AY.23 | 0.000139 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | AY.23 | 0.000139 |
ORF10 | 24 | R24R | cgT | cgC | 2 | 2 | AY.25 | 0.000012 |
ORF10 | 24 | R24del | CGT | --- | 2 | 2 | AY.25 | 0.000012 |
ORF10 | 24 | R24P | cGt | cCt | 2 | 2 | AY.3 | 0.00002 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.3.1 | 0.000171 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.30 | 0.000791 |
ORF10 | 24 | R24del | CGT | --- | 2 | 2 | AY.39.1 | 0.000079 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.4.1 | 0.001475 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | AY.4.2 | 0.000043 |
ORF10 | 24 | R24del | CGT | --- | 2 | 2 | AY.44 | 0.000012 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.46 | 0.000208 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.46.2 | 0.001271 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.46.5 | 0.000397 |
ORF10 | 24 | R24S | Cgt | Agt | 2 | 2 | AY.47 | 0.000062 |
ORF10 | 24 | R24R | cgT | cgC | 2 | 2 | AY.47 | 0.000062 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.57 | 0.001312 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.6 | 0.000082 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.7 | 0.000392 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.7.1 | 0.000225 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.7.2 | 0.001119 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | AY.70 | 0.000417 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.71 | 0.00095 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.73 | 0.001331 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.74 | 0.000231 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | AY.80 | 0.002257 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.85 | 0.000854 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.88 | 0.001768 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.9.1 | 0.000167 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.9.2 | 0.000073 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.9.2 | 0.000073 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | AY.92 | 0.000575 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.98.1 | 0.000097 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | AY.99 | 0.002099 |
ORF10 | 24 | R24V | CGT | GTA | 2 | 2 | B.1.1 | 0.000036 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.1 | 0.000653 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.170 | 0.002494 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.207 | 0.002364 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | B.1.1.216 | 0.001781 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.1.28 | 0.000622 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.317 | 0.000823 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.1.33 | 0.000842 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | B.1.1.336 | 0.033333 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.1.354 | 0.008772 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.359 | 0.055556 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.50 | 0.001358 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.1.526 | 0.007092 |
ORF10 | 24 | R24P | cGt | cCt | 2 | 2 | B.1.1.7 | 0.000002 |
ORF10 | 24 | R24F | CGt | TTt | 1 | 2 | B.1.1.7 | 0.000001 |
ORF10 | 24 | R24F | CGT | TTC | 1 | 2 | B.1.1.7 | 0.000001 |
ORF10 | 24 | R24S | Cgt | Agt | 2 | 2 | B.1.110.3 | 0.001437 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.146 | 0.008475 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.160 | 0.000062 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.177.12 | 0.000303 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.177.19 | 0.002861 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.177.5 | 0.002484 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.177.58 | 0.002663 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.177.83 | 0.002963 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.258.3 | 0.00335 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.306 | 0.011429 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.311 | 0.000549 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.362 | 0.003082 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.372 | 0.021978 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.404 | 0.002604 |
ORF10 | 24 | R24del | CGT | --- | 2 | 2 | B.1.438.1 | 0.000215 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.466.2 | 0.000782 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | B.1.480 | 0.004975 |
ORF10 | 24 | R24S | Cgt | Agt | 2 | 2 | B.1.540 | 0.019417 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.565 | 0.001621 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.568 | 0.002222 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.582 | 0.000981 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.619 | 0.001742 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.621 | 0.000177 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.1.621.1 | 0.001012 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | B.1.637 | 0.000146 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | B.4 | 0.004415 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | C.37.1 | 0.005236 |
ORF10 | 24 | R24del | CGT | --- | 2 | 2 | P.1 | 0.000032 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | P.1.10 | 0.000539 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | P.1.12 | 0.000968 |
ORF10 | 24 | R24S | Cgt | Agt | 2 | 2 | P.1.14 | 0.000096 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | P.1.14 | 0.000096 |
ORF10 | 24 | R24L | cGt | cTt | 2 | 2 | P.2 | 0.000373 |
ORF10 | 24 | R24H | cGt | cAt | 2 | 2 | Q.2 | 0.001227 |
ORF10 | 24 | R24C | Cgt | Tgt | 2 | 2 | Q.7 | 0.002222 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | 0.055556 | |
ORF10 | 24 | R24F | CGt | TTt | 1 | 1 | 0.055556 | |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | 0.055556 | |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | A.1 | 0.000282 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | A.1 | 0.000282 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | A.1 | 0.000282 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | A.19 | 0.009434 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | A.2 | 0.000662 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | A.2.2 | 0.001689 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | A.2.2 | 0.001689 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | A.2.5.2 | 0.001572 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | A.2.5.3 | 0.010309 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | A.23.1 | 0.000704 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | A.27 | 0.001656 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AE.3 | 0.032258 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AE.8 | 0.000489 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AH.3 | 0.003802 |
ORF10 | 24 | R24N | CGT | AAC | 1 | 1 | All | 0 |
ORF10 | 24 | R24I | CGT | ATA | 1 | 1 | All | 0 |
ORF10 | 24 | R24del2 | cGT | c-- | 1 | 1 | All | 0 |
ORF10 | 24 | R24Q | cGT | cAA | 1 | 1 | All | 0 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.1 | 0.000396 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.1 | 0.000396 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.10 | 0.00053 |
ORF10 | 24 | R24F | CGt | TTt | 1 | 1 | AY.102 | 0.000027 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.102 | 0.000027 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.103 | 0.000006 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.104 | 0.001984 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.105 | 0.000643 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.105 | 0.000643 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.107 | 0.000466 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.107 | 0.000466 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.108 | 0.001103 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.108 | 0.001103 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.110 | 0.000113 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.110 | 0.000113 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.113 | 0.000142 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.113 | 0.000142 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.114 | 0.000231 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.117 | 0.000085 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.118 | 0.000063 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.12 | 0.000316 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.120 | 0.000037 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.120.2 | 0.001285 |
ORF10 | 24 | R24del1 | Cgt | -gt | 1 | 1 | AY.121 | 0.000135 |
ORF10 | 24 | R24F | CGt | TTt | 1 | 1 | AY.121 | 0.000135 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.121 | 0.000135 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.13 | 0.000161 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.16 | 0.00038 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.16.1 | 0.00047 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.16.1 | 0.00047 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.17 | 0.008197 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.18 | 0.010101 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.19 | 0.00114 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.2 | 0.000356 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.20 | 0.000039 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.21 | 0.001898 |
ORF10 | 24 | R24R | cgT | cgA | 1 | 1 | AY.23.1 | 0.000417 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.24 | 0.000431 |
ORF10 | 24 | R24N | CGT | AAC | 1 | 1 | AY.25 | 0.000006 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.27 | 0.000065 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.27 | 0.000065 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.29 | 0.000016 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | AY.3 | 0.00001 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.3.1 | 0.000085 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.30 | 0.000396 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.34 | 0.000097 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.34.1 | 0.00051 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.39 | 0.000025 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.39.1 | 0.00004 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.39.1 | 0.00004 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.4.2 | 0.000022 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.4.2 | 0.000022 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.4.2 | 0.000022 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.4.4 | 0.000409 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.4.5 | 0.000107 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.4.5 | 0.000107 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.40 | 0.000964 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.41 | 0.000294 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.41 | 0.000294 |
ORF10 | 24 | R24del1 | Cgt | -gt | 1 | 1 | AY.44 | 0.000006 |
ORF10 | 24 | R24Q | cGT | cAA | 1 | 1 | AY.44 | 0.000006 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.45 | 0.000122 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.46 | 0.000104 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.46.2 | 0.000635 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.46.2 | 0.000635 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.46.4 | 0.000165 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.46.6 | 0.000072 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.46.6 | 0.000072 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | AY.46.6 | 0.000072 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.47 | 0.000031 |
ORF10 | 24 | R24W | CgT | TgG | 1 | 1 | AY.47 | 0.000031 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.48 | 0.000465 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.5.4 | 0.000277 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.52 | 0.000814 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.53 | 0.000288 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.54 | 0.000095 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.55 | 0.000917 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.56 | 0.001605 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.57 | 0.000656 |
ORF10 | 24 | R24G | Cgt | Ggt | 1 | 1 | AY.58 | 0.000907 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.59 | 0.00053 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.60 | 0.000938 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.61 | 0.000105 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.61 | 0.000105 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | AY.62 | 0.000436 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | AY.65 | 0.000533 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.68 | 0.000274 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.70 | 0.000209 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.70 | 0.000209 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.74 | 0.000116 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.74 | 0.000116 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.75 | 0.000056 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.75 | 0.000056 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.75.1 | 0.00018 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.78 | 0.001541 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.84 | 0.000437 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | AY.85 | 0.000427 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.9 | 0.000068 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | AY.9 | 0.000068 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.9.2 | 0.000037 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.90 | 0.000684 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.92 | 0.000287 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | AY.93 | 0.000273 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | AY.98 | 0.000079 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.98.1 | 0.000048 |
ORF10 | 24 | R24R | cgT | cgG | 1 | 1 | AY.98.1 | 0.000048 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AY.99 | 0.001049 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | AY.99.1 | 0.001553 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | AZ.2 | 0.000821 |
ORF10 | 24 | R24G | Cgt | Ggt | 1 | 1 | B | 0.000128 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B | 0.000128 |
ORF10 | 24 | R24del1 | Cgt | -gt | 1 | 1 | B.1 | 0.000009 |
ORF10 | 24 | R24G | Cgt | Ggt | 1 | 1 | B.1.1 | 0.000018 |
ORF10 | 24 | R24P | cGt | cCt | 1 | 1 | B.1.1 | 0.000018 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.10 | 0.001115 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.189 | 0.001513 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.210 | 0.005714 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.216 | 0.00089 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.218 | 0.007692 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.222 | 0.000204 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.224 | 0.014286 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.230 | 0.009174 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.231 | 0.003096 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.1.241 | 0.00207 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.241 | 0.00207 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.25 | 0.000569 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.253 | 0.002506 |
ORF10 | 24 | R24F | CGT | TTC | 1 | 1 | B.1.1.27 | 0.00565 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.277 | 0.000759 |
ORF10 | 24 | R24G | Cgt | Ggt | 1 | 1 | B.1.1.28 | 0.000311 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.28 | 0.000311 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.280 | 0.003086 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.1.284 | 0.000107 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.284 | 0.000107 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.298 | 0.000862 |
ORF10 | 24 | R24del1 | Cgt | -gt | 1 | 1 | B.1.1.306 | 0.000438 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.306 | 0.000438 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.318 | 0.000302 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | B.1.1.318 | 0.000302 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.322 | 0.008772 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.336 | 0.016667 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.363 | 0.005988 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.369 | 0.000446 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.1.370 | 0.012658 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.377 | 0.001381 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.389 | 0.006061 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.1.39 | 0.00051 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.39 | 0.00051 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.409 | 0.002833 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.422 | 0.045455 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.432 | 0.001266 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.456 | 0.055556 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.47 | 0.005348 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | B.1.1.519 | 0.00004 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.525 | 0.005464 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.54 | 0.003021 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.1.61 | 0.008772 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.1.63 | 0.000386 |
ORF10 | 24 | R24G | Cgt | Ggt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF10 | 24 | R24G | Cgt | Ggt | 1 | 1 | B.1.1.74 | 0.00431 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.1.83 | 0.00271 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.106 | 0.03125 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.110.3 | 0.000718 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.110.3 | 0.000718 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.139 | 0.000733 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.147 | 0.000756 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.153 | 0.018868 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.160 | 0.000031 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.160.16 | 0.000929 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.160.30 | 0.002976 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.177 | 0.000013 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.10 | 0.000878 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.177.21 | 0.000076 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.177.23 | 0.003236 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.177.4 | 0.000211 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.42 | 0.000894 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.177.43 | 0.001477 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.177.54 | 0.000606 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.56 | 0.000668 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.60 | 0.000218 |
ORF10 | 24 | R24W | CgT | TgG | 1 | 1 | B.1.177.63 | 0.002703 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.177.8 | 0.000752 |
ORF10 | 24 | R24del2 | cGT | c-- | 1 | 1 | B.1.2 | 0.000009 |
ORF10 | 24 | R24R | cgT | cgA | 1 | 1 | B.1.2 | 0.000009 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.210 | 0.002132 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.221 | 0.000071 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.222 | 0.001692 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.243 | 0.00007 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.258.11 | 0.000396 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.258.16 | 0.001637 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.258.21 | 0.007752 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.260 | 0.003344 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.265 | 0.001271 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.279 | 0.000514 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.279 | 0.000514 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.289 | 0.00266 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.311 | 0.000275 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.324 | 0.001605 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.336 | 0.002439 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.338 | 0.008621 |
ORF10 | 24 | R24V | CGT | GTA | 1 | 1 | B.1.351 | 0.00003 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.351.3 | 0.000876 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.36 | 0.000146 |
ORF10 | 24 | R24V | CGT | GTA | 1 | 1 | B.1.36.1 | 0.00114 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.36.10 | 0.004785 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.36.36 | 0.000602 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.36.7 | 0.004 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.36.8 | 0.001 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.369 | 0.000285 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.371 | 0.001122 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.375 | 0.00082 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.375 | 0.00082 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.377 | 0.004566 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.382 | 0.008929 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.391 | 0.001127 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.396 | 0.000706 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.398 | 0.002976 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.400.1 | 0.015152 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.408 | 0.00369 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.409 | 0.000781 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.415 | 0.014286 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.416 | 0.001269 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.422 | 0.000812 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.422 | 0.000812 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | B.1.427 | 0.00005 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.429 | 0.000024 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.438 | 0.006536 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.443 | 0.004673 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.456 | 0.003268 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.459 | 0.004082 |
ORF10 | 24 | R24I | CGT | ATA | 1 | 1 | B.1.497 | 0.000315 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.499 | 0.00105 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.500 | 0.052632 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.503 | 0.002488 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.517 | 0.000427 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.524 | 0.001406 |
ORF10 | 24 | R24S | Cgt | Agt | 1 | 1 | B.1.526 | 0.000024 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.526 | 0.000024 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.532 | 0.006211 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.550 | 0.013699 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | B.1.551 | 0.00129 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.555 | 0.022222 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.566 | 0.019231 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.575.1 | 0.002439 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.580 | 0.004065 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.587 | 0.001898 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.589 | 0.007576 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.592 | 0.04 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.595 | 0.000261 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | B.1.596 | 0.000087 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.601 | 0.030303 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.603 | 0.010638 |
ORF10 | 24 | R24S | CGT | TCC | 1 | 1 | B.1.617.1 | 0.000129 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.619.1 | 0.000641 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.1.621.1 | 0.000506 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.625 | 0.002353 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | B.1.9 | 0.006173 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.55 | 0.00295 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | B.6.6 | 0.000889 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | C.14 | 0.004329 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | C.36.3 | 0.000567 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | C.37 | 0.000116 |
ORF10 | 24 | R24R | cgT | cgC | 1 | 1 | D.2 | 0.000075 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | D.2 | 0.000075 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | N.4 | 0.004255 |
ORF10 | 24 | R24R | cgT | cgA | 1 | 1 | P.1 | 0.000016 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | P.1.13 | 0.000898 |
ORF10 | 24 | R24del | CGT | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF10 | 24 | R24L | cGt | cTt | 1 | 1 | P.1.7 | 0.000319 |
ORF10 | 24 | R24H | cGt | cAt | 1 | 1 | P.1.7 | 0.000319 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | P.3 | 0.001595 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | Q.4 | 0.000455 |
ORF10 | 24 | R24C | Cgt | Tgt | 1 | 1 | W.1 | 0.008696 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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