CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 298 | Y298Y | syn | taC | taT | 13878 | 13878 | 1 | 29165-29167 |
Details of the mutation Y298Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 298 | Y298Y | taC | taT | 13878 | 13878 | All | 0.002654 |
N | 298 | Y298Y | taC | taT | 2719 | 2719 | AY.118 | 0.170342 |
N | 298 | Y298Y | taC | taT | 1981 | 1981 | AY.92 | 0.569089 |
N | 298 | Y298Y | taC | taT | 1536 | 1536 | B.1.1.7 | 0.001375 |
N | 298 | Y298Y | taC | taT | 843 | 843 | AY.4 | 0.001312 |
N | 298 | Y298Y | taC | taT | 506 | 506 | AY.44 | 0.00308 |
N | 298 | Y298Y | taC | taT | 453 | 453 | AY.103 | 0.002813 |
N | 298 | Y298Y | taC | taT | 380 | 380 | B.1.177.7 | 0.062644 |
N | 298 | Y298Y | taC | taT | 322 | 322 | AY.21 | 0.611006 |
N | 298 | Y298Y | taC | taT | 319 | 319 | AY.3 | 0.003173 |
N | 298 | Y298Y | taC | taT | 298 | 298 | AY.25 | 0.001792 |
N | 298 | Y298Y | taC | taT | 283 | 283 | B.1.617.2 | 0.001066 |
N | 298 | Y298Y | taC | taT | 277 | 277 | B.1.610 | 0.98227 |
N | 298 | Y298Y | taC | taT | 272 | 272 | B.1.177 | 0.003582 |
N | 298 | Y298Y | taC | taT | 258 | 258 | B.1.36.35 | 0.671875 |
N | 298 | Y298Y | taC | taT | 219 | 219 | B.1 | 0.002006 |
N | 298 | Y298Y | taC | taT | 176 | 176 | B.1.2 | 0.00155 |
N | 298 | Y298Y | taC | taT | 150 | 150 | P.1 | 0.002363 |
N | 298 | Y298Y | taC | taT | 137 | 137 | AY.43 | 0.000607 |
N | 298 | Y298Y | taC | taT | 135 | 135 | B.1.1 | 0.002449 |
N | 298 | Y298Y | taC | taT | 127 | 127 | B.1.243 | 0.008837 |
N | 298 | Y298Y | taC | taT | 119 | 119 | AY.5 | 0.002457 |
N | 298 | Y298Y | taC | taT | 117 | 117 | B.1.1.519 | 0.004646 |
N | 298 | Y298Y | taC | taT | 115 | 115 | B.1.258 | 0.007653 |
N | 298 | Y298Y | taC | taT | 76 | 76 | AY.46 | 0.00791 |
N | 298 | Y298Y | taC | taT | 74 | 74 | AY.102 | 0.001962 |
N | 298 | Y298Y | taC | taT | 69 | 69 | B.1.429 | 0.001623 |
N | 298 | Y298Y | taC | taT | 64 | 64 | B.1.1.432 | 0.081013 |
N | 298 | Y298Y | taC | taT | 60 | 60 | B.1.1.355 | 0.923077 |
N | 298 | Y298Y | taC | taT | 54 | 54 | AY.121 | 0.007307 |
N | 298 | Y298Y | taC | taT | 53 | 53 | B.1.1.28 | 0.016495 |
N | 298 | Y298Y | taC | taT | 49 | 49 | AY.46.6 | 0.003538 |
N | 298 | Y298Y | taC | taT | 48 | 48 | AY.29 | 0.000757 |
N | 298 | Y298Y | taC | taT | 46 | 46 | B.1.351 | 0.001367 |
N | 298 | Y298Y | taC | taT | 45 | 45 | AY.42 | 0.00181 |
N | 298 | Y298Y | taC | taT | 43 | 43 | B.1.234 | 0.005674 |
N | 298 | Y298Y | taC | taT | 42 | 42 | AY.33 | 0.002805 |
N | 298 | Y298Y | taC | taT | 40 | 40 | AY.17 | 0.327869 |
N | 298 | Y298Y | taC | taT | 40 | 40 | AY.39 | 0.000988 |
N | 298 | Y298Y | taC | taT | 33 | 33 | B.1.177.43 | 0.048744 |
N | 298 | Y298Y | taC | taT | 33 | 33 | B.1.177.54 | 0.020012 |
N | 298 | Y298Y | taC | taT | 31 | 31 | AY.83 | 0.053448 |
N | 298 | Y298Y | taC | taT | 30 | 30 | C.37 | 0.003482 |
N | 298 | Y298Y | taC | taT | 29 | 29 | B.1.258.17 | 0.003015 |
N | 298 | Y298Y | taC | taT | 29 | 29 | P.1.1 | 0.009212 |
N | 298 | Y298Y | taC | taT | 27 | 27 | B.1.1.70 | 0.009209 |
N | 298 | Y298Y | taC | taT | 27 | 27 | B.1.160 | 0.000842 |
N | 298 | Y298Y | taC | taT | 24 | 24 | B.1.1.354 | 0.105263 |
N | 298 | Y298Y | taC | taT | 23 | 23 | B.61 | 0.132184 |
N | 298 | Y298Y | taC | taT | 22 | 22 | AY.45 | 0.002677 |
N | 298 | Y298Y | taC | taT | 22 | 22 | P.2 | 0.004106 |
N | 298 | Y298Y | taC | taT | 21 | 21 | AY.4.2 | 0.000455 |
N | 298 | Y298Y | taC | taT | 20 | 20 | P.1.14 | 0.000956 |
N | 298 | Y298Y | taC | taT | 20 | 20 | R.1 | 0.0018 |
N | 298 | Y298Y | taC | taT | 19 | 19 | B.1.320 | 0.023661 |
N | 298 | Y298Y | taC | taT | 17 | 17 | AY.20 | 0.000661 |
N | 298 | Y298Y | taC | taT | 17 | 17 | B.1.258.14 | 0.016667 |
N | 298 | Y298Y | taC | taT | 15 | 15 | AY.117 | 0.001268 |
N | 298 | Y298Y | taC | taT | 15 | 15 | AY.39.1 | 0.000594 |
N | 298 | Y298Y | taC | taT | 15 | 15 | B.1.1.207 | 0.01773 |
N | 298 | Y298Y | taC | taT | 15 | 15 | B.1.258.10 | 0.170455 |
N | 298 | Y298Y | taC | taT | 14 | 14 | AY.47 | 0.000435 |
N | 298 | Y298Y | taC | taT | 14 | 14 | B.1.596 | 0.00122 |
N | 298 | Y298Y | taC | taT | 14 | 14 | P.1.7 | 0.00447 |
N | 298 | Y298Y | taC | taT | 13 | 13 | AY.27 | 0.000841 |
N | 298 | Y298Y | taC | taT | 13 | 13 | B.1.36 | 0.001897 |
N | 298 | Y298Y | taC | taT | 13 | 13 | B.1.637 | 0.00095 |
N | 298 | Y298Y | taC | taT | 12 | 12 | AY.26 | 0.00034 |
N | 298 | Y298Y | taC | taT | 12 | 12 | AY.74 | 0.001388 |
N | 298 | Y298Y | taC | taT | 12 | 12 | B.1.1.50 | 0.008147 |
N | 298 | Y298Y | taC | taT | 12 | 12 | B.1.531 | 1 |
N | 298 | Y298Y | taC | taT | 11 | 11 | AY.119 | 0.000388 |
N | 298 | Y298Y | taC | taT | 11 | 11 | B.1.221 | 0.000781 |
N | 298 | Y298Y | taC | taT | 11 | 11 | B.1.311 | 0.00302 |
N | 298 | Y298Y | taC | taT | 10 | 10 | AY.61 | 0.001048 |
N | 298 | Y298Y | taC | taT | 10 | 10 | B.1.351.2 | 0.003026 |
N | 298 | Y298Y | taC | taT | 10 | 10 | B.1.427 | 0.000505 |
N | 298 | Y298Y | taC | taT | 10 | 10 | B.1.621 | 0.000885 |
N | 298 | Y298Y | taC | taT | 9 | 9 | AY.120 | 0.000335 |
N | 298 | Y298Y | taC | taT | 9 | 9 | AY.3.1 | 0.000767 |
N | 298 | Y298Y | taC | taT | 9 | 9 | AY.5.4 | 0.00249 |
N | 298 | Y298Y | taC | taT | 9 | 9 | AY.75.1 | 0.001623 |
N | 298 | Y298Y | taC | taT | 9 | 9 | AY.9.2 | 0.000331 |
N | 298 | Y298Y | taC | taT | 9 | 9 | B.1.617.1 | 0.001161 |
N | 298 | Y298Y | taC | taT | 8 | 8 | AY.100 | 0.000368 |
N | 298 | Y298Y | taC | taT | 8 | 8 | AY.113 | 0.001139 |
N | 298 | Y298Y | taC | taT | 8 | 8 | AY.16.1 | 0.003759 |
N | 298 | Y298Y | taC | taT | 8 | 8 | AY.23 | 0.000558 |
N | 298 | Y298Y | taC | taT | 8 | 8 | AY.34 | 0.000776 |
N | 298 | Y298Y | taC | taT | 8 | 8 | AY.37 | 0.002528 |
N | 298 | Y298Y | taC | taT | 8 | 8 | B.1.1.189 | 0.012103 |
N | 298 | Y298Y | taC | taT | 8 | 8 | B.1.36.29 | 0.004139 |
N | 298 | Y298Y | taC | taT | 8 | 8 | B.1.391 | 0.009019 |
N | 298 | Y298Y | taC | taT | 8 | 8 | B.1.526 | 0.000188 |
N | 298 | Y298Y | taC | taT | 7 | 7 | AY.110 | 0.000789 |
N | 298 | Y298Y | taC | taT | 7 | 7 | AY.46.5 | 0.001389 |
N | 298 | Y298Y | taC | taT | 7 | 7 | AY.75 | 0.000392 |
N | 298 | Y298Y | taC | taT | 7 | 7 | B.1.1.214 | 0.000388 |
N | 298 | Y298Y | taC | taT | 7 | 7 | B.1.1.25 | 0.00398 |
N | 298 | Y298Y | taC | taT | 7 | 7 | B.1.346 | 0.009174 |
N | 298 | Y298Y | taC | taT | 7 | 7 | B.1.466.2 | 0.002739 |
N | 298 | Y298Y | taC | taT | 7 | 7 | B.1.525 | 0.000792 |
N | 298 | Y298Y | taC | taT | 6 | 6 | AY.105 | 0.003859 |
N | 298 | Y298Y | taC | taT | 6 | 6 | AY.88 | 0.005305 |
N | 298 | Y298Y | taC | taT | 6 | 6 | AY.91 | 0.004383 |
N | 298 | Y298Y | taC | taT | 6 | 6 | AY.98 | 0.000474 |
N | 298 | Y298Y | taC | taT | 6 | 6 | B | 0.000767 |
N | 298 | Y298Y | taC | taT | 6 | 6 | B.1.1.33 | 0.002525 |
N | 298 | Y298Y | taC | taT | 6 | 6 | B.1.177.8 | 0.004515 |
N | 298 | Y298Y | taC | taT | 6 | 6 | B.1.628 | 0.002114 |
N | 298 | Y298Y | taC | taT | 5 | 5 | AY.54 | 0.000477 |
N | 298 | Y298Y | taC | taT | 5 | 5 | AY.64 | 0.002976 |
N | 298 | Y298Y | taC | taT | 5 | 5 | AY.7 | 0.00098 |
N | 298 | Y298Y | taC | taT | 5 | 5 | AY.9.1 | 0.000419 |
N | 298 | Y298Y | taC | taT | 5 | 5 | B.1.1.176 | 0.002197 |
N | 298 | Y298Y | taC | taT | 5 | 5 | B.1.1.220 | 0.009294 |
N | 298 | Y298Y | taC | taT | 5 | 5 | B.1.111 | 0.005875 |
N | 298 | Y298Y | taC | taT | 5 | 5 | B.1.177.56 | 0.003338 |
N | 298 | Y298Y | taC | taT | 5 | 5 | B.1.595 | 0.001305 |
N | 298 | Y298Y | taC | taT | 5 | 5 | C.35 | 0.00387 |
N | 298 | Y298Y | taC | taT | 5 | 5 | D.2 | 0.000375 |
N | 298 | Y298Y | taC | taT | 5 | 5 | P.1.15 | 0.001162 |
N | 298 | Y298Y | taC | taT | 5 | 5 | Q.1 | 0.000632 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AE.8 | 0.001956 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.16 | 0.001519 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.4.5 | 0.00043 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.46.2 | 0.002541 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.55 | 0.00367 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.6 | 0.000165 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.77 | 0.00451 |
N | 298 | Y298Y | taC | taT | 4 | 4 | AY.98.1 | 0.000194 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.177.19 | 0.005722 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.336 | 0.009756 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.369 | 0.001141 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.396 | 0.002823 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.470 | 0.005618 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.480 | 0.00995 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.575 | 0.001214 |
N | 298 | Y298Y | taC | taT | 4 | 4 | B.1.623 | 0.002146 |
N | 298 | Y298Y | taC | taT | 4 | 4 | Q.3 | 0.00058 |
N | 298 | Y298Y | taC | taT | 4 | 4 | Q.8 | 0.00066 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.111 | 0.000549 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.24 | 0.001293 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.32 | 0.001597 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.36 | 0.000445 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.5.3 | 0.001012 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.89 | 0.014706 |
N | 298 | Y298Y | taC | taT | 3 | 3 | AY.99.2 | 0.000276 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.129 | 0.027523 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.222 | 0.000612 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.284 | 0.000322 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.306 | 0.001315 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.409 | 0.008499 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.464 | 0.004418 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.63 | 0.001157 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.1.8 | 0.010753 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.160.28 | 0.008772 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.177.81 | 0.000568 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.177.84 | 0.02 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.192 | 0.027778 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.241 | 0.002435 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.36.17 | 0.001482 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.36.8 | 0.003 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.438.1 | 0.000322 |
N | 298 | Y298Y | taC | taT | 3 | 3 | B.1.609 | 0.001438 |
N | 298 | Y298Y | taC | taT | 3 | 3 | C.16 | 0.003181 |
N | 298 | Y298Y | taC | taT | 2 | 2 | 0.111111 | |
N | 298 | Y298Y | taC | taT | 2 | 2 | A.2.5 | 0.000998 |
N | 298 | Y298Y | taC | taT | 2 | 2 | A.2.5.3 | 0.020619 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.104 | 0.003968 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.106 | 0.00067 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.107 | 0.000932 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.109 | 0.001479 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.114 | 0.000462 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.116 | 0.000574 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.35 | 0.000466 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.4.2.1 | 0.000298 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.46.4 | 0.000329 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.52 | 0.001629 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.53 | 0.000575 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.57 | 0.001312 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.65 | 0.001066 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.79 | 0.002421 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.81 | 0.003984 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.84 | 0.000875 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.95 | 0.001522 |
N | 298 | Y298Y | taC | taT | 2 | 2 | AY.96 | 0.004149 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.1 | 0.000653 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.277 | 0.001517 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.372 | 0.001377 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.434 | 0.000697 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.486 | 0.003155 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.515 | 0.04 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.1.518 | 0.012658 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.177.15 | 0.001262 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.240 | 0.000431 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.361 | 0.002577 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.400 | 0.000858 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.517 | 0.000854 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.524 | 0.002813 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.562 | 0.037037 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.582 | 0.000981 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.612 | 0.005305 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.617.3 | 0.00597 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.638 | 0.105263 |
N | 298 | Y298Y | taC | taT | 2 | 2 | B.1.9.5 | 0.011364 |
N | 298 | Y298Y | taC | taT | 2 | 2 | C.36 | 0.001821 |
N | 298 | Y298Y | taC | taT | 2 | 2 | P.1.10 | 0.000539 |
N | 298 | Y298Y | taC | taT | 2 | 2 | P.1.12 | 0.000968 |
N | 298 | Y298Y | taC | taT | 2 | 2 | P.1.16 | 0.000748 |
N | 298 | Y298Y | taC | taT | 1 | 1 | A.2 | 0.000662 |
N | 298 | Y298Y | taC | taT | 1 | 1 | A.2.4 | 0.003367 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AA.1 | 0.007246 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AD.2 | 0.000219 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AS.1 | 0.009524 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.101 | 0.00049 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.13 | 0.000161 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.2 | 0.000356 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.23.1 | 0.000417 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.4.1 | 0.000737 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.40 | 0.000964 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.46.1 | 0.001027 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.68 | 0.000274 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.85 | 0.000427 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.9 | 0.000068 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AY.99 | 0.001049 |
N | 298 | Y298Y | taC | taT | 1 | 1 | AZ.3 | 0.00152 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.148 | 0.008772 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.161 | 0.003534 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.198 | 0.001468 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.216 | 0.00089 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.221 | 0.010101 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.228 | 0.003049 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.265 | 0.003155 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.282 | 0.011628 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.311 | 0.000358 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.318 | 0.000302 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.348 | 0.000796 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.37 | 0.000193 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.385 | 0.004464 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.389 | 0.006061 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.396 | 0.045455 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.397 | 0.002252 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.416 | 0.000905 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.44 | 0.00241 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.463 | 0.0625 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.482 | 0.023256 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.523 | 0.001563 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.83 | 0.00271 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.1.98 | 0.018519 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.139 | 0.000733 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.160.30 | 0.002976 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.31 | 0.011494 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.35 | 0.000691 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.4 | 0.000211 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.44 | 0.000519 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.58 | 0.001332 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.63 | 0.002703 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.71 | 0.010101 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.75 | 0.001041 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.79 | 0.002342 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.177.86 | 0.000183 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.206 | 0.000816 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.236 | 0.002053 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.265 | 0.001271 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.279 | 0.000514 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.3 | 0.002618 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.349 | 0.000715 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.35 | 0.008475 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.36.18 | 0.00042 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.36.20 | 0.016949 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.36.22 | 0.001208 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.363 | 0.012987 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.399 | 0.001934 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.404 | 0.001302 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.425 | 0.002994 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.456 | 0.003268 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.544 | 0.006024 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.560 | 0.00463 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.561 | 0.000397 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.564 | 0.000426 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.565 | 0.00081 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.577 | 0.000687 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.600 | 0.005848 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.603 | 0.010638 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.1.625 | 0.002353 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.28 | 0.003279 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.3 | 0.000831 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.30 | 0.014706 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.31 | 0.003731 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.40 | 0.000364 |
N | 298 | Y298Y | taC | taT | 1 | 1 | B.52 | 0.010101 |
N | 298 | Y298Y | taC | taT | 1 | 1 | C.23 | 0.005814 |
N | 298 | Y298Y | taC | taT | 1 | 1 | C.26 | 0.007353 |
N | 298 | Y298Y | taC | taT | 1 | 1 | C.37.1 | 0.002618 |
N | 298 | Y298Y | taC | taT | 1 | 1 | K.2 | 0.04 |
N | 298 | Y298Y | taC | taT | 1 | 1 | P.1.2 | 0.001156 |
N | 298 | Y298Y | taC | taT | 1 | 1 | P.3 | 0.001595 |
N | 298 | Y298Y | taC | taT | 1 | 1 | Q.4 | 0.000455 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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