CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = Y268Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N268Y268YsyntaCtaT1031210312129075-29077

Details of the mutation Y268Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N268Y268YtaCtaT1031210312All0.001972
N268Y268YtaCtaT40554055B.1.1.70.00363
N268Y268YtaCtaT705705AY.40.001097
N268Y268YtaCtaT641641B.1.617.20.002414
N268Y268YtaCtaT400400B.1.1.2790.44843
N268Y268YtaCtaT283283AY.90.019129
N268Y268YtaCtaT282282AZ.50.989474
N268Y268YtaCtaT263263B.1.20.002316
N268Y268YtaCtaT262262B.1.1770.00345
N268Y268YtaCtaT167167AY.330.011152
N268Y268YtaCtaT165165AY.440.001004
N268Y268YtaCtaT144144AY.430.000638
N268Y268YtaCtaT140140B.1.6370.01023
N268Y268YtaCtaT124124B.1.10.002249
N268Y268YtaCtaT124124B.1.177.120.018811
N268Y268YtaCtaT122122B.1.4270.006161
N268Y268YtaCtaT118118AY.4.20.002559
N268Y268YtaCtaT113113AY.50.002333
N268Y268YtaCtaT105105P.10.001654
N268Y268YtaCtaT9999B.1.4290.002329
N268Y268YtaCtaT9999B.4.71
N268Y268YtaCtaT9898AY.1030.000608
N268Y268YtaCtaT9797B.1.3980.28869
N268Y268YtaCtaT8787B.10.000797
N268Y268YtaCtaT8282AY.30.000816
N268Y268YtaCtaT7979B.1.2340.010424
N268Y268YtaCtaT7373AY.250.000439
N268Y268YtaCtaT7171B.1.5960.006187
N268Y268YtaCtaT5151AY.240.021983
N268Y268YtaCtaT4242AY.200.001632
N268Y268YtaCtaT3636B.1.1600.001123
N268Y268YtaCtaT3030AY.390.000741
N268Y268YtaCtaT3030B.1.1.2140.001664
N268Y268YtaCtaT2929AY.1140.006702
N268Y268YtaCtaT2727AY.1200.001004
N268Y268YtaCtaT2626B.1.3770.118721
N268Y268YtaCtaT2525B.1.1.4340.008714
N268Y268YtaCtaT2323B.1.3510.000684
N268Y268YtaCtaT2121B.1.1.5190.000834
N268Y268YtaCtaT2121B.1.5260.000494
N268Y268YtaCtaT2020AY.1190.000706
N268Y268YtaCtaT2020AY.260.000566
N268Y268YtaCtaT1919AY.290.0003
N268Y268YtaCtaT1919AY.840.008311
N268Y268YtaCtaT1919B.1.2210.00135
N268Y268YtaCtaT1919B.1.5050.083333
N268Y268YtaCtaT1717AY.1180.001065
N268Y268YtaCtaT1717AY.1210.0023
N268Y268YtaCtaT1717AY.130.002737
N268Y268YtaCtaT1717B.1.1.2220.003468
N268Y268YtaCtaT1717B.1.177.600.003713
N268Y268YtaCtaT1717B.1.258.170.001768
N268Y268YtaCtaT1717C.370.001973
N268Y268YtaCtaT1515AY.1000.00069
N268Y268YtaCtaT1515B.1.177.350.010366
N268Y268YtaCtaT1515B.1.5030.037313
N268Y268YtaCtaT1515Q.80.002474
N268Y268YtaCtaT1313P.20.002426
N268Y268YtaCtaT1212B.1.5250.001358
N268Y268YtaCtaT1212P.1.100.003234
N268Y268YtaCtaT1111AY.230.000767
N268Y268YtaCtaT1111AY.9.10.000921
N268Y268YtaCtaT1111B.1.1.280.003424
N268Y268YtaCtaT1010AY.360.001482
N268Y268YtaCtaT1010B.1.1.3480.007962
N268Y268YtaCtaT1010B.1.360.001459
N268Y268YtaCtaT1010C.360.009107
N268Y268YtaCtaT99AY.3.10.000767
N268Y268YtaCtaT99B.1.177.580.011984
N268Y268YtaCtaT99B.1.3490.006433
N268Y268YtaCtaT99B.1.6270.018182
N268Y268YtaCtaT99P.1.150.002091
N268Y268YtaCtaT88AY.470.000249
N268Y268YtaCtaT88B.1.1.330.003367
N268Y268YtaCtaT77AH.11
N268Y268YtaCtaT77AY.1020.000186
N268Y268YtaCtaT77AY.46.60.000505
N268Y268YtaCtaT77AY.99.20.000645
N268Y268YtaCtaT77B.1.1.1090.28
N268Y268YtaCtaT77B.1.1.2200.013011
N268Y268YtaCtaT77B.1.1.5120.2
N268Y268YtaCtaT77B.1.177.70.001154
N268Y268YtaCtaT77B.1.2410.005682
N268Y268YtaCtaT77Q.10.000884
N268Y268YtaCtaT66AY.23.10.002504
N268Y268YtaCtaT66AY.420.000241
N268Y268YtaCtaT66AY.680.001642
N268Y268YtaCtaT66B.1.2430.000418
N268Y268YtaCtaT66B.1.3970.029126
N268Y268YtaCtaT66B.1.4700.008427
N268Y268YtaCtaT66B.1.6210.000531
N268Y268YtaCtaT55AY.5.40.001384
N268Y268YtaCtaT55AY.75.10.000902
N268Y268YtaCtaT55AY.98.10.000242
N268Y268YtaCtaT55B.1.1.10.001633
N268Y268YtaCtaT55B.1.1810.098039
N268Y268YtaCtaT55B.1.5610.001985
N268Y268YtaCtaT55D.20.000375
N268Y268YtaCtaT55P.1.140.000239
N268Y268YtaCtaT44A.2.50.001996
N268Y268YtaCtaT44AY.1090.002959
N268Y268YtaCtaT44AY.1110.000733
N268Y268YtaCtaT44AY.116.10.001246
N268Y268YtaCtaT44AY.140.000352
N268Y268YtaCtaT44AY.270.000259
N268Y268YtaCtaT44AY.570.002625
N268Y268YtaCtaT44AY.9.20.000147
N268Y268YtaCtaT44AY.980.000316
N268Y268YtaCtaT44AY.99.10.006211
N268Y268YtaCtaT44B.1.160.180.029197
N268Y268YtaCtaT44B.1.177.860.000734
N268Y268YtaCtaT44B.1.221.20.016064
N268Y268YtaCtaT44B.1.438.10.000429
N268Y268YtaCtaT44B.1.5210.0199
N268Y268YtaCtaT44B.1.617.10.000516
N268Y268YtaCtaT33A0.001161
N268Y268YtaCtaT33AY.1010.001471
N268Y268YtaCtaT33AY.1050.001929
N268Y268YtaCtaT33AY.300.001187
N268Y268YtaCtaT33AY.340.000291
N268Y268YtaCtaT33AY.46.50.000595
N268Y268YtaCtaT33AY.750.000168
N268Y268YtaCtaT33B.1.1.1350.014085
N268Y268YtaCtaT33B.1.1.2160.002671
N268Y268YtaCtaT33B.1.1.2410.006211
N268Y268YtaCtaT33B.1.1.250.001706
N268Y268YtaCtaT33B.1.1.3180.000905
N268Y268YtaCtaT33B.1.1.4320.003797
N268Y268YtaCtaT33B.1.1.500.002037
N268Y268YtaCtaT33B.1.1390.002199
N268Y268YtaCtaT33B.1.160.160.002788
N268Y268YtaCtaT33B.1.177.330.004934
N268Y268YtaCtaT33B.1.2580.0002
N268Y268YtaCtaT33B.1.3110.000824
N268Y268YtaCtaT33B.1.36.290.001552
N268Y268YtaCtaT33B.1.5760.00272
N268Y268YtaCtaT33P.1.20.003468
N268Y268YtaCtaT33R.10.00027
N268Y268YtaCtaT22AE.80.000978
N268Y268YtaCtaT22AY.1060.00067
N268Y268YtaCtaT22AY.1100.000225
N268Y268YtaCtaT22AY.1160.000574
N268Y268YtaCtaT22AY.1170.000169
N268Y268YtaCtaT22AY.120.000632
N268Y268YtaCtaT22AY.160.000759
N268Y268YtaCtaT22AY.280.003781
N268Y268YtaCtaT22AY.39.10.000079
N268Y268YtaCtaT22AY.4.50.000215
N268Y268YtaCtaT22AY.540.000191
N268Y268YtaCtaT22AY.550.001835
N268Y268YtaCtaT22AY.60.000082
N268Y268YtaCtaT22AY.670.000929
N268Y268YtaCtaT22AY.700.000417
N268Y268YtaCtaT22AY.830.003448
N268Y268YtaCtaT22AY.9.2.10.003953
N268Y268YtaCtaT22AY.910.001461
N268Y268YtaCtaT22B0.000256
N268Y268YtaCtaT22B.1.1.1890.003026
N268Y268YtaCtaT22B.1.1.3170.000823
N268Y268YtaCtaT22B.1.1.3260.003521
N268Y268YtaCtaT22B.1.1.3510.005587
N268Y268YtaCtaT22B.1.1.390.001019
N268Y268YtaCtaT22B.1.1.3970.004505
N268Y268YtaCtaT22B.1.1110.00235
N268Y268YtaCtaT22B.1.1280.001271
N268Y268YtaCtaT22B.1.1470.001512
N268Y268YtaCtaT22B.1.177.210.000153
N268Y268YtaCtaT22B.1.177.40.000422
N268Y268YtaCtaT22B.1.177.730.001133
N268Y268YtaCtaT22B.1.177.90.002663
N268Y268YtaCtaT22B.1.214.20.001199
N268Y268YtaCtaT22B.1.2400.000431
N268Y268YtaCtaT22B.1.3690.00057
N268Y268YtaCtaT22B.1.3750.001639
N268Y268YtaCtaT22B.1.416.10.003125
N268Y268YtaCtaT22B.1.4280.002041
N268Y268YtaCtaT22B.1.4800.004975
N268Y268YtaCtaT22B.1.4970.00063
N268Y268YtaCtaT22B.1.5090.001732
N268Y268YtaCtaT22B.60.00182
N268Y268YtaCtaT22C.20.032258
N268Y268YtaCtaT22P.1.10.000635
N268Y268YtaCtaT11A.180.05
N268Y268YtaCtaT11A.20.000662
N268Y268YtaCtaT11A.210.00277
N268Y268YtaCtaT11A.23.10.000704
N268Y268YtaCtaT11A.290.005319
N268Y268YtaCtaT11AD.20.000219
N268Y268YtaCtaT11AV.10.005051
N268Y268YtaCtaT11AY.1130.000142
N268Y268YtaCtaT11AY.16.10.00047
N268Y268YtaCtaT11AY.20.000356
N268Y268YtaCtaT11AY.39.20.001541
N268Y268YtaCtaT11AY.4.2.10.000149
N268Y268YtaCtaT11AY.450.000122
N268Y268YtaCtaT11AY.460.000104
N268Y268YtaCtaT11AY.46.40.000165
N268Y268YtaCtaT11AY.480.000465
N268Y268YtaCtaT11AY.5.30.000337
N268Y268YtaCtaT11AY.610.000105
N268Y268YtaCtaT11AY.650.000533
N268Y268YtaCtaT11AY.660.00107
N268Y268YtaCtaT11AY.7.10.000113
N268Y268YtaCtaT11AY.740.000116
N268Y268YtaCtaT11AY.770.001127
N268Y268YtaCtaT11AY.80.000606
N268Y268YtaCtaT11AY.820.001357
N268Y268YtaCtaT11AY.850.000427
N268Y268YtaCtaT11AY.920.000287
N268Y268YtaCtaT11AY.930.000273
N268Y268YtaCtaT11B.1.1.100.001115
N268Y268YtaCtaT11B.1.1.1220.045455
N268Y268YtaCtaT11B.1.1.1410.002012
N268Y268YtaCtaT11B.1.1.1530.001095
N268Y268YtaCtaT11B.1.1.1610.003534
N268Y268YtaCtaT11B.1.1.1720.018182
N268Y268YtaCtaT11B.1.1.2070.001182
N268Y268YtaCtaT11B.1.1.2100.005714
N268Y268YtaCtaT11B.1.1.2270.004348
N268Y268YtaCtaT11B.1.1.2290.005747
N268Y268YtaCtaT11B.1.1.2550.00303
N268Y268YtaCtaT11B.1.1.2770.000759
N268Y268YtaCtaT11B.1.1.2840.000107
N268Y268YtaCtaT11B.1.1.3150.008475
N268Y268YtaCtaT11B.1.1.3160.000925
N268Y268YtaCtaT11B.1.1.3370.003597
N268Y268YtaCtaT11B.1.1.3690.000446
N268Y268YtaCtaT11B.1.1.3730.02381
N268Y268YtaCtaT11B.1.1.3740.002375
N268Y268YtaCtaT11B.1.1.3890.006061
N268Y268YtaCtaT11B.1.1.4290.004608
N268Y268YtaCtaT11B.1.1.4640.001473
N268Y268YtaCtaT11B.1.1.4860.001577
N268Y268YtaCtaT11B.1.1.510.001718
N268Y268YtaCtaT11B.1.1.5180.006329
N268Y268YtaCtaT11B.1.1.630.000386
N268Y268YtaCtaT11B.1.1170.0125
N268Y268YtaCtaT11B.1.160.110.005714
N268Y268YtaCtaT11B.1.1620.005025
N268Y268YtaCtaT11B.1.1700.00431
N268Y268YtaCtaT11B.1.177.20.004545
N268Y268YtaCtaT11B.1.177.320.00135
N268Y268YtaCtaT11B.1.177.430.001477
N268Y268YtaCtaT11B.1.177.500.004695
N268Y268YtaCtaT11B.1.177.560.000668
N268Y268YtaCtaT11B.1.177.570.000281
N268Y268YtaCtaT11B.1.177.60.000977
N268Y268YtaCtaT11B.1.177.650.000665
N268Y268YtaCtaT11B.1.177.690.001484
N268Y268YtaCtaT11B.1.177.80.000752
N268Y268YtaCtaT11B.1.177.800.001912
N268Y268YtaCtaT11B.1.177.810.000189
N268Y268YtaCtaT11B.1.2060.000816
N268Y268YtaCtaT11B.1.243.10.022222
N268Y268YtaCtaT11B.1.258.30.001675
N268Y268YtaCtaT11B.1.2650.001271
N268Y268YtaCtaT11B.1.2790.000514
N268Y268YtaCtaT11B.1.351.30.000876
N268Y268YtaCtaT11B.1.3590.022727
N268Y268YtaCtaT11B.1.36.10.00114
N268Y268YtaCtaT11B.1.36.160.001425
N268Y268YtaCtaT11B.1.3610.001289
N268Y268YtaCtaT11B.1.3620.001541
N268Y268YtaCtaT11B.1.3670.000792
N268Y268YtaCtaT11B.1.3780.006849
N268Y268YtaCtaT11B.1.3950.007042
N268Y268YtaCtaT11B.1.3960.000706
N268Y268YtaCtaT11B.1.4040.001302
N268Y268YtaCtaT11B.1.4080.00369
N268Y268YtaCtaT11B.1.4090.000781
N268Y268YtaCtaT11B.1.4160.001269
N268Y268YtaCtaT11B.1.4560.003268
N268Y268YtaCtaT11B.1.466.20.000391
N268Y268YtaCtaT11B.1.5170.000427
N268Y268YtaCtaT11B.1.5230.002451
N268Y268YtaCtaT11B.1.5240.001406
N268Y268YtaCtaT11B.1.5410.004425
N268Y268YtaCtaT11B.1.5580.004566
N268Y268YtaCtaT11B.1.5820.000491
N268Y268YtaCtaT11B.1.5950.000261
N268Y268YtaCtaT11B.1.595.10.005848
N268Y268YtaCtaT11B.1.6020.006536
N268Y268YtaCtaT11B.1.6060.006024
N268Y268YtaCtaT11B.1.617.30.002985
N268Y268YtaCtaT11B.1.6180.004032
N268Y268YtaCtaT11B.1.6200.000946
N268Y268YtaCtaT11B.1.621.10.000506
N268Y268YtaCtaT11B.1.6300.005236
N268Y268YtaCtaT11B.1.90.006173
N268Y268YtaCtaT11B.340.013699
N268Y268YtaCtaT11B.40.002208
N268Y268YtaCtaT11C.350.000774
N268Y268YtaCtaT11N.50.001767
N268Y268YtaCtaT11P.1.120.000484
N268Y268YtaCtaT11P.70.004367
N268Y268YtaCtaT11Q.30.000145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.