CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = T54R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N54T54RnonsynACcCGc520.428433-28435
N54T54RnonsynaCCaGA510.228433-28435
N54T54RnonsynaCCaGG510.228433-28435
N54T54RnonsynACCCGG510.228433-28435

Details of the mutation T54R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N54T54RACcCGc25All0
N54T54RaCCaGA15All0
N54T54RaCCaGG15All0
N54T54RACCCGG15All0
N54T54RaCCaGG130.055556
N54T54RACcCGc130.055556
N54T54RACCCGG130.055556
N54T54RACcCGc11AY.1010.00049
N54T54RaCCaGA11AY.250.000006