CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = T49I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N49T49InonsynaCtaTt138313820.99927728418-28420
N49T49InonsynaCTaTC138310.00072306628418-28420

Details of the mutation T49I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N49T49IaCtaTt13821383All0.000264
N49T49IaCTaTC11383All0
N49T49IaCtaTt666666AY.520.542345
N49T49IaCtaTt245245B.1.617.20.000923
N49T49IaCtaTt6262B.1.10.001125
N49T49IaCtaTt4343B.1.1.70.000038
N49T49IaCtaTt3737AY.610.003877
N49T49IaCtaTt3535AY.40.000054
N49T49IaCtaTt3030AY.620.013072
N49T49IaCtaTt3030P.10.000473
N49T49IaCtaTt2222AY.430.000097
N49T49IaCtaTt2121N.50.037102
N49T49IaCtaTt1414B.1.6210.001239
N49T49IaCtaTt1313AY.1030.000081
N49T49IaCtaTt1313B.10.000119
N49T49IaCtaTt1212B.1.20.000106
N49T49IaCtaTt88B.1.1.2190.04
N49T49IaCtaTt88B.1.2580.000532
N49T49IaCtaTt77B.1.1.390.003568
N49T49IaCtaTt77B.1.4290.000165
N49T49IaCtaTt66B.1.1.500.004073
N49T49IaCtaTt55B.1.1.2650.015773
N49T49IaCtaTt55B.1.177.600.001092
N49T49IaCtaTt44AY.200.000155
N49T49IaCtaTt44AY.750.000224
N49T49IaCtaTt44B.1.1.250.002274
N49T49IaCtaTt44B.1.1.5190.000159
N49T49IaCtaTt44B.1.1770.000053
N49T49IaCtaTt44B.1.5090.003463
N49T49IaCtaTt33AY.1190.000106
N49T49IaCtaTt33AY.540.000286
N49T49IaCtaTt33B.1.1.2220.000612
N49T49IaCtaTt22AY.1020.000053
N49T49IaCtaTt22AY.250.000012
N49T49IaCtaTt22AY.4.20.000043
N49T49IaCtaTt22AY.440.000012
N49T49IaCtaTt22AY.470.000062
N49T49IaCtaTt22AY.75.10.000361
N49T49IaCtaTt22AY.930.000546
N49T49IaCtaTt22B.1.177.110.003396
N49T49IaCtaTt22B.1.177.730.001133
N49T49IaCtaTt22B.1.2340.000264
N49T49IaCtaTt22B.1.2430.000139
N49T49IaCtaTt22B.1.5260.000047
N49T49IaCtaTt11AY.1000.000046
N49T49IaCtaTt11AY.1170.000085
N49T49IaCtaTt11AY.1200.000037
N49T49IaCtaTt11AY.16.10.00047
N49T49IaCtaTt11AY.260.000028
N49T49IaCtaTt11AY.280.00189
N49T49IaCtaTt11AY.30.00001
N49T49IaCtaTt11AY.300.000396
N49T49IaCtaTt11AY.390.000025
N49T49IaCtaTt11AY.39.10.00004
N49T49IaCtaTt11AY.39.1.10.000725
N49T49IaCtaTt11AY.420.00004
N49T49IaCtaTt11AY.450.000122
N49T49IaCTaTC11AY.480.000465
N49T49IaCtaTt11AY.50.000021
N49T49IaCtaTt11AY.640.000595
N49T49IaCtaTt11AY.670.000464
N49T49IaCtaTt11AY.850.000427
N49T49IaCtaTt11AY.90.000068
N49T49IaCtaTt11AY.9.20.000037
N49T49IaCtaTt11AY.980.000079
N49T49IaCtaTt11B.1.1.1610.003534
N49T49IaCtaTt11B.1.1.2630.001558
N49T49IaCtaTt11B.1.1.2820.011628
N49T49IaCtaTt11B.1.1.4090.002833
N49T49IaCtaTt11B.1.1.630.000386
N49T49IaCtaTt11B.1.1600.000031
N49T49IaCtaTt11B.1.177.860.000183
N49T49IaCtaTt11B.1.2210.000071
N49T49IaCtaTt11B.1.3510.00003
N49T49IaCtaTt11B.1.36.380.001642
N49T49IaCtaTt11B.1.4620.007246
N49T49IaCtaTt11C.350.000774
N49T49IaCtaTt11C.36.30.000567
N49T49IaCtaTt11P.1.10.000318
N49T49IaCtaTt11P.20.000187
N49T49IaCtaTt11R.10.00009