CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 334 | T334I | nonsyn | aCa | aTa | 5928 | 5928 | 1 | 29273-29275 |
Details of the mutation T334I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 334 | T334I | aCa | aTa | 5928 | 5928 | All | 0.001134 |
N | 334 | T334I | aCa | aTa | 1668 | 1668 | B.1.1.7 | 0.001493 |
N | 334 | T334I | aCa | aTa | 503 | 503 | AY.4 | 0.000783 |
N | 334 | T334I | aCa | aTa | 280 | 280 | B.1.258.4 | 0.965517 |
N | 334 | T334I | aCa | aTa | 226 | 226 | B.1.177 | 0.002976 |
N | 334 | T334I | aCa | aTa | 206 | 206 | B.1.617.2 | 0.000776 |
N | 334 | T334I | aCa | aTa | 196 | 196 | AY.25 | 0.001179 |
N | 334 | T334I | aCa | aTa | 177 | 177 | AY.43 | 0.000784 |
N | 334 | T334I | aCa | aTa | 163 | 163 | B.1.2 | 0.001435 |
N | 334 | T334I | aCa | aTa | 139 | 139 | B.1.177.15 | 0.087697 |
N | 334 | T334I | aCa | aTa | 130 | 130 | B.1.1.214 | 0.007209 |
N | 334 | T334I | aCa | aTa | 114 | 114 | B.1.258.5 | 1 |
N | 334 | T334I | aCa | aTa | 96 | 96 | B.1 | 0.000879 |
N | 334 | T334I | aCa | aTa | 91 | 91 | AY.119 | 0.003213 |
N | 334 | T334I | aCa | aTa | 87 | 87 | AY.103 | 0.00054 |
N | 334 | T334I | aCa | aTa | 82 | 82 | B.1.160 | 0.002557 |
N | 334 | T334I | aCa | aTa | 78 | 78 | B.1.258 | 0.005191 |
N | 334 | T334I | aCa | aTa | 69 | 69 | P.1 | 0.001087 |
N | 334 | T334I | aCa | aTa | 63 | 63 | B.1.177.7 | 0.010386 |
N | 334 | T334I | aCa | aTa | 62 | 62 | AY.44 | 0.000377 |
N | 334 | T334I | aCa | aTa | 52 | 52 | B.1.351 | 0.001546 |
N | 334 | T334I | aCa | aTa | 50 | 50 | R.1 | 0.0045 |
N | 334 | T334I | aCa | aTa | 47 | 47 | B.1.1 | 0.000853 |
N | 334 | T334I | aCa | aTa | 42 | 42 | B.1.258.23 | 1 |
N | 334 | T334I | aCa | aTa | 42 | 42 | B.1.637 | 0.003069 |
N | 334 | T334I | aCa | aTa | 41 | 41 | AY.3 | 0.000408 |
N | 334 | T334I | aCa | aTa | 38 | 38 | B.1.1.228 | 0.115854 |
N | 334 | T334I | aCa | aTa | 35 | 35 | AY.53 | 0.010063 |
N | 334 | T334I | aCa | aTa | 27 | 27 | AY.46.2 | 0.017154 |
N | 334 | T334I | aCa | aTa | 26 | 26 | B.1.346 | 0.034076 |
N | 334 | T334I | aCa | aTa | 25 | 25 | B.1.234 | 0.003299 |
N | 334 | T334I | aCa | aTa | 25 | 25 | B.1.427 | 0.001262 |
N | 334 | T334I | aCa | aTa | 24 | 24 | AY.75 | 0.001345 |
N | 334 | T334I | aCa | aTa | 22 | 22 | AY.5 | 0.000454 |
N | 334 | T334I | aCa | aTa | 20 | 20 | B.1.177.4 | 0.004221 |
N | 334 | T334I | aCa | aTa | 20 | 20 | B.1.623 | 0.01073 |
N | 334 | T334I | aCa | aTa | 19 | 19 | AY.102 | 0.000504 |
N | 334 | T334I | aCa | aTa | 19 | 19 | B.1.596 | 0.001656 |
N | 334 | T334I | aCa | aTa | 17 | 17 | B.1.1.306 | 0.007453 |
N | 334 | T334I | aCa | aTa | 17 | 17 | B.1.1.416 | 0.015385 |
N | 334 | T334I | aCa | aTa | 17 | 17 | B.1.429 | 0.0004 |
N | 334 | T334I | aCa | aTa | 17 | 17 | B.1.438.1 | 0.001823 |
N | 334 | T334I | aCa | aTa | 16 | 16 | AY.23 | 0.001116 |
N | 334 | T334I | aCa | aTa | 16 | 16 | AY.4.2 | 0.000347 |
N | 334 | T334I | aCa | aTa | 16 | 16 | AY.5.3 | 0.005398 |
N | 334 | T334I | aCa | aTa | 16 | 16 | B.1.1.222 | 0.003264 |
N | 334 | T334I | aCa | aTa | 16 | 16 | B.1.400 | 0.006864 |
N | 334 | T334I | aCa | aTa | 14 | 14 | B.1.1.519 | 0.000556 |
N | 334 | T334I | aCa | aTa | 14 | 14 | B.1.311 | 0.003844 |
N | 334 | T334I | aCa | aTa | 14 | 14 | P.1.14 | 0.000669 |
N | 334 | T334I | aCa | aTa | 14 | 14 | P.2 | 0.002613 |
N | 334 | T334I | aCa | aTa | 13 | 13 | AY.100 | 0.000598 |
N | 334 | T334I | aCa | aTa | 13 | 13 | AY.46 | 0.001353 |
N | 334 | T334I | aCa | aTa | 13 | 13 | AY.47 | 0.000404 |
N | 334 | T334I | aCa | aTa | 12 | 12 | AY.39 | 0.000297 |
N | 334 | T334I | aCa | aTa | 12 | 12 | B.1.177.86 | 0.002201 |
N | 334 | T334I | aCa | aTa | 12 | 12 | B.1.36 | 0.001751 |
N | 334 | T334I | aCa | aTa | 12 | 12 | P.1.12 | 0.005808 |
N | 334 | T334I | aCa | aTa | 11 | 11 | AY.29 | 0.000174 |
N | 334 | T334I | aCa | aTa | 11 | 11 | AY.98.1 | 0.000533 |
N | 334 | T334I | aCa | aTa | 11 | 11 | B.1.526 | 0.000259 |
N | 334 | T334I | aCa | aTa | 11 | 11 | D.2 | 0.000825 |
N | 334 | T334I | aCa | aTa | 10 | 10 | AY.98 | 0.00079 |
N | 334 | T334I | aCa | aTa | 10 | 10 | B.1.1.216 | 0.008905 |
N | 334 | T334I | aCa | aTa | 10 | 10 | B.1.575 | 0.003034 |
N | 334 | T334I | aCa | aTa | 10 | 10 | B.28 | 0.032787 |
N | 334 | T334I | aCa | aTa | 9 | 9 | AY.26 | 0.000255 |
N | 334 | T334I | aCa | aTa | 9 | 9 | AY.34 | 0.000873 |
N | 334 | T334I | aCa | aTa | 9 | 9 | AY.36 | 0.001334 |
N | 334 | T334I | aCa | aTa | 9 | 9 | B.1.1.434 | 0.003137 |
N | 334 | T334I | aCa | aTa | 9 | 9 | B.1.221 | 0.000639 |
N | 334 | T334I | aCa | aTa | 9 | 9 | C.36 | 0.008197 |
N | 334 | T334I | aCa | aTa | 9 | 9 | Q.8 | 0.001484 |
N | 334 | T334I | aCa | aTa | 8 | 8 | AY.14 | 0.000704 |
N | 334 | T334I | aCa | aTa | 8 | 8 | B.1.1.136 | 0.170213 |
N | 334 | T334I | aCa | aTa | 8 | 8 | B.1.1.369 | 0.00357 |
N | 334 | T334I | aCa | aTa | 8 | 8 | B.1.1.523 | 0.0125 |
N | 334 | T334I | aCa | aTa | 8 | 8 | B.1.243 | 0.000557 |
N | 334 | T334I | aCa | aTa | 7 | 7 | AY.118 | 0.000439 |
N | 334 | T334I | aCa | aTa | 7 | 7 | AY.54 | 0.000667 |
N | 334 | T334I | aCa | aTa | 7 | 7 | AZ.2 | 0.005747 |
N | 334 | T334I | aCa | aTa | 7 | 7 | B | 0.000895 |
N | 334 | T334I | aCa | aTa | 7 | 7 | B.1.1.174 | 0.023649 |
N | 334 | T334I | aCa | aTa | 7 | 7 | C.37 | 0.000812 |
N | 334 | T334I | aCa | aTa | 7 | 7 | Q.1 | 0.000884 |
N | 334 | T334I | aCa | aTa | 6 | 6 | AY.116.1 | 0.001869 |
N | 334 | T334I | aCa | aTa | 6 | 6 | AY.120 | 0.000223 |
N | 334 | T334I | aCa | aTa | 6 | 6 | AY.20 | 0.000233 |
N | 334 | T334I | aCa | aTa | 6 | 6 | AY.5.4 | 0.00166 |
N | 334 | T334I | aCa | aTa | 6 | 6 | B.1.389 | 0.006012 |
N | 334 | T334I | aCa | aTa | 6 | 6 | B.1.617.1 | 0.000774 |
N | 334 | T334I | aCa | aTa | 6 | 6 | B.1.621 | 0.000531 |
N | 334 | T334I | aCa | aTa | 5 | 5 | AY.4.5 | 0.000537 |
N | 334 | T334I | aCa | aTa | 5 | 5 | AY.9 | 0.000338 |
N | 334 | T334I | aCa | aTa | 5 | 5 | AY.9.2 | 0.000184 |
N | 334 | T334I | aCa | aTa | 5 | 5 | B.1.1.207 | 0.00591 |
N | 334 | T334I | aCa | aTa | 5 | 5 | B.1.396 | 0.003529 |
N | 334 | T334I | aCa | aTa | 5 | 5 | B.1.405 | 0.061728 |
N | 334 | T334I | aCa | aTa | 5 | 5 | B.1.525 | 0.000566 |
N | 334 | T334I | aCa | aTa | 4 | 4 | AE.8 | 0.001956 |
N | 334 | T334I | aCa | aTa | 4 | 4 | AY.27 | 0.000259 |
N | 334 | T334I | aCa | aTa | 4 | 4 | AY.39.1 | 0.000158 |
N | 334 | T334I | aCa | aTa | 4 | 4 | AY.4.3 | 0.003367 |
N | 334 | T334I | aCa | aTa | 4 | 4 | AY.46.4 | 0.000658 |
N | 334 | T334I | aCa | aTa | 4 | 4 | AY.99.2 | 0.000369 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.1.1 | 0.001307 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.1.284 | 0.00043 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.1.286 | 0.011594 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.1.317 | 0.001647 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.1.432 | 0.005063 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.177.20 | 0.00607 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.36.18 | 0.001681 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.466.2 | 0.001565 |
N | 334 | T334I | aCa | aTa | 4 | 4 | B.1.523 | 0.009804 |
N | 334 | T334I | aCa | aTa | 4 | 4 | P.1.10 | 0.001078 |
N | 334 | T334I | aCa | aTa | 3 | 3 | A.2.5 | 0.001497 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.120.1 | 0.000963 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.121 | 0.000406 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.4.1 | 0.002212 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.42 | 0.000121 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.46.6 | 0.000217 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.73 | 0.001996 |
N | 334 | T334I | aCa | aTa | 3 | 3 | AY.93 | 0.000819 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.1.277 | 0.002276 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.1.486 | 0.004732 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.1.70 | 0.001023 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.177.21 | 0.000229 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.199 | 0.012397 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.329 | 0.001823 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.351.2 | 0.000908 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.480 | 0.007463 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.509 | 0.002597 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.577 | 0.002062 |
N | 334 | T334I | aCa | aTa | 3 | 3 | B.1.609 | 0.001438 |
N | 334 | T334I | aCa | aTa | 3 | 3 | Q.4 | 0.001364 |
N | 334 | T334I | aCa | aTa | 2 | 2 | A | 0.000774 |
N | 334 | T334I | aCa | aTa | 2 | 2 | A.1 | 0.000564 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.109 | 0.001479 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.111 | 0.000366 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.113 | 0.000285 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.13 | 0.000322 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.2 | 0.000712 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.3.1 | 0.000171 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.35 | 0.000466 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.45 | 0.000243 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.51 | 0.001818 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.6 | 0.000082 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.61 | 0.00021 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.68 | 0.000547 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.7.1 | 0.000225 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.71 | 0.00095 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.75.1 | 0.000361 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.80 | 0.002257 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.85 | 0.000854 |
N | 334 | T334I | aCa | aTa | 2 | 2 | AY.9.1 | 0.000167 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.221 | 0.020202 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.229 | 0.011494 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.25 | 0.001137 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.28 | 0.000622 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.289 | 0.004167 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.311 | 0.000716 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.37 | 0.000386 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.39 | 0.001019 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.1.50 | 0.001358 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.108 | 0.011628 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.111 | 0.00235 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.177.43 | 0.002954 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.214.2 | 0.001199 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.351.3 | 0.001753 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.36.19 | 0.018519 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.36.31 | 0.003503 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.36.35 | 0.005208 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.409 | 0.001563 |
N | 334 | T334I | aCa | aTa | 2 | 2 | B.1.628 | 0.000705 |
N | 334 | T334I | aCa | aTa | 2 | 2 | C.30 | 0.003454 |
N | 334 | T334I | aCa | aTa | 2 | 2 | P.1.15 | 0.000465 |
N | 334 | T334I | aCa | aTa | 2 | 2 | P.1.6 | 0.003891 |
N | 334 | T334I | aCa | aTa | 2 | 2 | Q.3 | 0.00029 |
N | 334 | T334I | aCa | aTa | 1 | 1 | 0.055556 | |
N | 334 | T334I | aCa | aTa | 1 | 1 | A.2.5.1 | 0.004808 |
N | 334 | T334I | aCa | aTa | 1 | 1 | A.2.5.2 | 0.001572 |
N | 334 | T334I | aCa | aTa | 1 | 1 | A.23.1 | 0.000704 |
N | 334 | T334I | aCa | aTa | 1 | 1 | A.5 | 0.001923 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AA.1 | 0.007246 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AA.7 | 0.009174 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AB.1 | 0.008197 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AM.4 | 0.003571 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.1 | 0.000396 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.114 | 0.000231 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.117 | 0.000085 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.16 | 0.00038 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.23.1 | 0.000417 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.30 | 0.000396 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.33 | 0.000067 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.34.1 | 0.00051 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.37 | 0.000316 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.38 | 0.000499 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.39.2 | 0.001541 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.40 | 0.000964 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.46.3 | 0.000934 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.46.5 | 0.000198 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.57 | 0.000656 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.59 | 0.00053 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.63 | 0.000387 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.67 | 0.000464 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.69 | 0.000187 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.7.2 | 0.000559 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.79 | 0.001211 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.84 | 0.000437 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.86 | 0.00083 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.88 | 0.000884 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AY.97 | 0.001701 |
N | 334 | T334I | aCa | aTa | 1 | 1 | AZ.1 | 0.000867 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.176 | 0.000439 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.241 | 0.00207 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.291 | 0.000742 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.294 | 0.001266 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.312 | 0.001912 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.335 | 0.012987 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.356 | 0.008547 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.370 | 0.012658 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.398 | 0.003226 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.407 | 0.041667 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.464 | 0.001473 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.487 | 0.005587 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.1.525 | 0.005464 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.13 | 0.002375 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.146 | 0.004237 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.157 | 0.002985 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.160.16 | 0.000929 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.160.29 | 0.004219 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.160.30 | 0.002976 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.166 | 0.008475 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.23 | 0.003236 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.30 | 0.002513 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.36 | 0.016129 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.44 | 0.000519 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.45 | 0.000381 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.48 | 0.003125 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.63 | 0.002703 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.69 | 0.001484 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.75 | 0.001041 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.81 | 0.000189 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.85 | 0.005435 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.177.87 | 0.000728 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.213 | 0.014925 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.241 | 0.000812 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.258.17 | 0.000104 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.258.19 | 0.007092 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.293 | 0.0125 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.309 | 0.047619 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.336 | 0.002439 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.36.27 | 0.000763 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.36.29 | 0.000517 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.36.38 | 0.001642 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.369 | 0.000285 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.379 | 0.017241 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.397 | 0.004854 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.398 | 0.002976 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.406 | 0.006061 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.416.1 | 0.001563 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.426 | 0.001009 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.470 | 0.001404 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.530 | 0.007143 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.541 | 0.004425 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.551 | 0.00129 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.556 | 0.007519 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.560 | 0.00463 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.561 | 0.000397 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.566 | 0.019231 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.576 | 0.000907 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.591 | 0.010638 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.595 | 0.000261 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.618 | 0.004032 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.625 | 0.002353 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.8 | 0.001972 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.88.1 | 0.004808 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.93 | 0.000934 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.1.94 | 0.027027 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.3 | 0.000831 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.31 | 0.003731 |
N | 334 | T334I | aCa | aTa | 1 | 1 | B.6.6 | 0.000889 |
N | 334 | T334I | aCa | aTa | 1 | 1 | C.36.3 | 0.000567 |
N | 334 | T334I | aCa | aTa | 1 | 1 | P.1.17 | 0.000162 |
N | 334 | T334I | aCa | aTa | 1 | 1 | P.1.2 | 0.001156 |
N | 334 | T334I | aCa | aTa | 1 | 1 | P.1.7 | 0.000319 |
N | 334 | T334I | aCa | aTa | 1 | 1 | P.1.8 | 0.004785 |
N | 334 | T334I | aCa | aTa | 1 | 1 | Q.2 | 0.000613 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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