CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = T282T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N282T282TsynacCacT611355610.90970129117-29119
N282T282TsynacCacA61133340.054637729117-29119
N282T282TsynacCacG61132180.035661729117-29119

Details of the mutation T282T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N282T282TacCacT55616113All0.001064
N282T282TacCacA3346113All0.000064
N282T282TacCacG2186113All0.000042
N282T282TacCacT12991358AY.250.007813
N282T282TacCacA581358AY.250.000349
N282T282TacCacG11358AY.250.000006
N282T282TacCacT9671228B.1.1.70.000866
N282T282TacCacA1881228B.1.1.70.000168
N282T282TacCacG731228B.1.1.70.000065
N282T282TacCacT455455AY.690.084936
N282T282TacCacT439453AY.40.000683
N282T282TacCacA11453AY.40.000017
N282T282TacCacG3453AY.40.000005
N282T282TacCacT340341AY.1190.012005
N282T282TacCacA1341AY.1190.000035
N282T282TacCacT179180B.1.1770.002357
N282T282TacCacG1180B.1.1770.000013
N282T282TacCacG75139AY.430.000332
N282T282TacCacT60139AY.430.000266
N282T282TacCacA4139AY.430.000018
N282T282TacCacT138138AY.99.20.012718
N282T282TacCacT121131B.1.617.20.000456
N282T282TacCacA8131B.1.617.20.00003
N282T282TacCacG2131B.1.617.20.000008
N282T282TacCacT124125AY.440.000755
N282T282TacCacA1125AY.440.000006
N282T282TacCacT9898B.1.20.000863
N282T282TacCacT7484AY.1030.000459
N282T282TacCacG784AY.1030.000043
N282T282TacCacA384AY.1030.000019
N282T282TacCacT7982AY.3.10.006735
N282T282TacCacA382AY.3.10.000256
N282T282TacCacT7679B.1.10.001379
N282T282TacCacG379B.1.10.000054
N282T282TacCacT6567B.10.000595
N282T282TacCacG167B.10.000009
N282T282TacCacA167B.10.000009
N282T282TacCacT6466P.10.001008
N282T282TacCacG166P.10.000016
N282T282TacCacA166P.10.000016
N282T282TacCacT6262AY.420.002494
N282T282TacCacT4646B.1.3050.098925
N282T282TacCacT4042AY.200.001555
N282T282TacCacA242AY.200.000078
N282T282TacCacT4142AY.260.001161
N282T282TacCacA142AY.260.000028
N282T282TacCacT3639AY.30.000358
N282T282TacCacG339AY.30.00003
N282T282TacCacG3434AY.130.005473
N282T282TacCacT3131B.1.1.5260.109929
N282T282TacCacT2929B.1.6310.097643
N282T282TacCacT2828B.1.5250.003168
N282T282TacCacT2626B.1.1600.000811
N282T282TacCacT2525AY.1010.012261
N282T282TacCacT2325AY.390.000568
N282T282TacCacG125AY.390.000025
N282T282TacCacA125AY.390.000025
N282T282TacCacT2121B.1.177.820.010024
N282T282TacCacT1919B.1.3510.000565
N282T282TacCacT1818B.1.2430.001253
N282T282TacCacT1717AY.1000.000782
N282T282TacCacT1316AY.50.000268
N282T282TacCacA316AY.50.000062
N282T282TacCacT1415AY.470.000435
N282T282TacCacA115AY.470.000031
N282T282TacCacA1314B.1.4970.004092
N282T282TacCacT114B.1.4970.000315
N282T282TacCacT1414B.1.5260.000329
N282T282TacCacT1012AY.1020.000265
N282T282TacCacA212AY.1020.000053
N282T282TacCacT1012AY.9.20.000367
N282T282TacCacA212AY.9.20.000073
N282T282TacCacT1212B.1.1.2160.010686
N282T282TacCacT1212B.1.1810.235294
N282T282TacCacT1111AY.1110.002015
N282T282TacCacT911AY.290.000142
N282T282TacCacA211AY.290.000032
N282T282TacCacT1011B.1.4290.000235
N282T282TacCacA111B.1.4290.000024
N282T282TacCacT1010AY.1210.001353
N282T282TacCacT99AY.850.003845
N282T282TacCacT99B.1.1.4640.013255
N282T282TacCacT99B.1.1.700.00307
N282T282TacCacA99B.1.177.210.000688
N282T282TacCacT78AY.1170.000592
N282T282TacCacA18AY.1170.000085
N282T282TacCacT88AY.98.10.000387
N282T282TacCacT88B.1.1.5190.000318
N282T282TacCacT67AY.4.20.00013
N282T282TacCacG17AY.4.20.000022
N282T282TacCacT77AY.4.50.000752
N282T282TacCacT77B.1.1.2910.005197
N282T282TacCacT77B.1.177.620.008343
N282T282TacCacT77B.1.2400.001509
N282T282TacCacT77B.1.350.11
N282T282TacCacT77B.1.360.001021
N282T282TacCacT67Q.10.000758
N282T282TacCacA17Q.10.000126
N282T282TacCacT77Q.30.001015
N282T282TacCacT56AY.230.000349
N282T282TacCacG16AY.230.00007
N282T282TacCacT46B.1.2340.000528
N282T282TacCacA26B.1.2340.000264
N282T282TacCacT66B.1.466.20.002347
N282T282TacCacT66B.1.5740.012903
N282T282TacCacT55A.190.04717
N282T282TacCacG55AY.350.001165
N282T282TacCacT55AY.450.000608
N282T282TacCacT55AY.540.000477
N282T282TacCacT45B.1.1.2220.000816
N282T282TacCacA15B.1.1.2220.000204
N282T282TacCacT55B.1.177.600.001092
N282T282TacCacT35B.1.2580.0002
N282T282TacCacG25B.1.2580.000133
N282T282TacCacT55B.1.4270.000252
N282T282TacCacT55P.1.100.001347
N282T282TacCacT44AY.4.40.001637
N282T282TacCacT34AY.460.000312
N282T282TacCacA14AY.460.000104
N282T282TacCacT34AY.610.000314
N282T282TacCacA14AY.610.000105
N282T282TacCacT44AY.740.000463
N282T282TacCacT44B.1.1.280.001245
N282T282TacCacT44B.1.1.3440.043011
N282T282TacCacT44B.1.1.500.002716
N282T282TacCacT44B.1.6090.001918
N282T282TacCacT44P.1.140.000191
N282T282TacCacT44P.1.150.000929
N282T282TacCacT33AY.1040.005952
N282T282TacCacT33AY.1160.00086
N282T282TacCacT23AY.1200.000074
N282T282TacCacA13AY.1200.000037
N282T282TacCacT33AY.39.10.000119
N282T282TacCacT33AY.4.2.10.000447
N282T282TacCacT33B.1.1.10.00098
N282T282TacCacT23B.1.1.330.000842
N282T282TacCacA13B.1.1.330.000421
N282T282TacCacT33B.1.1.4120.022901
N282T282TacCacT33B.1.177.540.001819
N282T282TacCacT33B.1.177.560.002003
N282T282TacCacT33B.1.214.20.001799
N282T282TacCacT33B.1.2210.000213
N282T282TacCacT33B.1.2790.001541
N282T282TacCacT33B.1.36.170.001482
N282T282TacCacT33B.1.3960.002117
N282T282TacCacT33B.1.4080.01107
N282T282TacCacT33B.1.4700.004213
N282T282TacCacT33B.1.5610.001191
N282T282TacCacT23B.40.004415
N282T282TacCacG13B.40.002208
N282T282TacCacT33D.20.000225
N282T282TacCacG220.111111
N282T282TacCacT22AY.116.10.000623
N282T282TacCacT22AY.1180.000125
N282T282TacCacT22AY.120.10.000642
N282T282TacCacT22AY.270.000129
N282T282TacCacT22AY.330.000134
N282T282TacCacT22AY.360.000296
N282T282TacCacG12AY.620.000436
N282T282TacCacT12AY.620.000436
N282T282TacCacT22AY.750.000112
N282T282TacCacT22AY.75.10.000361
N282T282TacCacT22AY.90.000135
N282T282TacCacT22AY.910.001461
N282T282TacCacT22AY.980.000158
N282T282TacCacT22B0.000256
N282T282TacCacT22B.1.1.260.010471
N282T282TacCacT22B.1.1.370.000386
N282T282TacCacT22B.1.110.30.001437
N282T282TacCacT22B.1.1310.017544
N282T282TacCacT22B.1.2360.004107
N282T282TacCacT22B.1.258.170.000208
N282T282TacCacT22B.1.36.280.011494
N282T282TacCacT22B.1.36.290.001035
N282T282TacCacT22B.1.4040.002604
N282T282TacCacT22B.1.4360.002058
N282T282TacCacT22B.1.5170.000854
N282T282TacCacT22B.1.619.10.001283
N282T282TacCacT22B.1.6200.001892
N282T282TacCacT22B.1.6370.000146
N282T282TacCacT22B.230.005848
N282T282TacCacT22C.370.000232
N282T282TacCacT22Q.80.00033
N282T282TacCacT22S.10.009901
N282T282TacCacT11A0.000387
N282T282TacCacT11A.10.000282
N282T282TacCacT11AD.20.000219
N282T282TacCacT11AY.1060.000335
N282T282TacCacT11AY.1100.000113
N282T282TacCacT11AY.1130.000142
N282T282TacCacT11AY.140.000088
N282T282TacCacT11AY.150.002222
N282T282TacCacT11AY.16.10.00047
N282T282TacCacT11AY.280.00189
N282T282TacCacT11AY.320.000532
N282T282TacCacT11AY.370.000316
N282T282TacCacT11AY.380.000499
N282T282TacCacT11AY.4.30.000842
N282T282TacCacT11AY.590.00053
N282T282TacCacT11AY.60.000041
N282T282TacCacT11AY.670.000464
N282T282TacCacT11AY.680.000274
N282T282TacCacT11AY.7.10.000113
N282T282TacCacT11AY.730.000665
N282T282TacCacT11AY.770.001127
N282T282TacCacA11AY.80.000606
N282T282TacCacT11AY.840.000437
N282T282TacCacA11AY.860.00083
N282T282TacCacT11AY.9.10.000084
N282T282TacCacT11AY.900.000684
N282T282TacCacT11AY.920.000287
N282T282TacCacT11AY.990.001049
N282T282TacCacT11B.1.1.1530.001095
N282T282TacCacT11B.1.1.1610.003534
N282T282TacCacT11B.1.1.1980.001468
N282T282TacCacT11B.1.1.2140.000055
N282T282TacCacT11B.1.1.2200.001859
N282T282TacCacT11B.1.1.270.00565
N282T282TacCacT11B.1.1.2840.000107
N282T282TacCacT11B.1.1.3040.002809
N282T282TacCacT11B.1.1.3160.000925
N282T282TacCacT11B.1.1.3530.020833
N282T282TacCacT11B.1.1.3720.000689
N282T282TacCacT11B.1.1.4090.002833
N282T282TacCacT11B.1.1.4840.1
N282T282TacCacA11B.1.1.5230.001563
N282T282TacCacT11B.1.1.630.000386
N282T282TacCacT11B.1.1110.001175
N282T282TacCacT11B.1.160.120.00641
N282T282TacCacT11B.1.160.160.000929
N282T282TacCacT11B.1.177.430.001477
N282T282TacCacT11B.1.177.50.001242
N282T282TacCacT11B.1.177.550.002331
N282T282TacCacT11B.1.177.570.000281
N282T282TacCacT11B.1.177.880.012346
N282T282TacCacT11B.1.2140.003663
N282T282TacCacA11B.1.221.30.000833
N282T282TacCacT11B.1.2320.000537
N282T282TacCacA11B.1.3320.003497
N282T282TacCacT11B.1.351.20.000303
N282T282TacCacT11B.1.36.10.00114
N282T282TacCacA11B.1.3620.001541
N282T282TacCacA11B.1.3690.000285
N282T282TacCacT11B.1.3710.001122
N282T282TacCacA11B.1.4530.003236
N282T282TacCacT11B.1.5240.001406
N282T282TacCacT11B.1.5400.009709
N282T282TacCacT11B.1.5450.014493
N282T282TacCacT11B.1.5680.001111
N282T282TacCacT11B.1.5750.000303
N282T282TacCacT11B.1.5770.000687
N282T282TacCacT11B.1.5880.00091
N282T282TacCacT11B.1.5960.000087
N282T282TacCacT11B.1.6210.000089
N282T282TacCacT11B.1.6280.000352
N282T282TacCacT11B.400.000364
N282T282TacCacA11B.60.00091
N282T282TacCacT11C.160.00106
N282T282TacCacT11P.1.170.000162
N282T282TacCacT11P.1.70.000319
N282T282TacCacT11P.20.000187
N282T282TacCacT11P.30.001595
N282T282TacCacT11Q.70.001111