CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = T16T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N16T16TsynacGacT674346690.69242228319-28321
N16T16TsynacGacA674320630.30594728319-28321
N16T16TsynacGacC6743110.0016313228319-28321

Details of the mutation T16T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N16T16TacGacT46696743All0.000893
N16T16TacGacA20636743All0.000395
N16T16TacGacC116743All0.000002
N16T16TacGacA11321132B.1.177.100.993854
N16T16TacGacT10631130B.1.1.70.000952
N16T16TacGacA631130B.1.1.70.000056
N16T16TacGacC41130B.1.1.70.000004
N16T16TacGacT863893AY.40.001343
N16T16TacGacA29893AY.40.000045
N16T16TacGacC1893AY.40.000002
N16T16TacGacT306306B.1.2340.040375
N16T16TacGacT103176B.1.20.000907
N16T16TacGacA72176B.1.20.000634
N16T16TacGacC1176B.1.20.000009
N16T16TacGacT121175B.10.001108
N16T16TacGacA54175B.10.000495
N16T16TacGacT138146B.1.617.20.00052
N16T16TacGacA8146B.1.617.20.00003
N16T16TacGacT141141B.1.177.120.02139
N16T16TacGacT82119B.1.1770.00108
N16T16TacGacA37119B.1.1770.000487
N16T16TacGacA71115B.1.10.001288
N16T16TacGacT44115B.1.10.000798
N16T16TacGacT113114AY.740.013068
N16T16TacGacA1114AY.740.000116
N16T16TacGacA79105B.1.4290.001859
N16T16TacGacT25105B.1.4290.000588
N16T16TacGacC1105B.1.4290.000024
N16T16TacGacT9495B.1.1.500.063815
N16T16TacGacA195B.1.1.500.000679
N16T16TacGacT9494AY.420.003782
N16T16TacGacT7787AY.1030.000478
N16T16TacGacA1087AY.1030.000062
N16T16TacGacT8282B.1.1.2661
N16T16TacGacT6777AY.430.000297
N16T16TacGacA877AY.430.000035
N16T16TacGacC277AY.430.000009
N16T16TacGacT5867AY.30.000577
N16T16TacGacA967AY.30.00009
N16T16TacGacT6565U.20.570175
N16T16TacGacT5364P.10.000835
N16T16TacGacA1064P.10.000158
N16T16TacGacC164P.10.000016
N16T16TacGacT6060AY.4.50.00645
N16T16TacGacT5160B.1.1600.001591
N16T16TacGacA960B.1.1600.000281
N16T16TacGacT5959AY.540.005625
N16T16TacGacT4052AY.250.000241
N16T16TacGacA1252AY.250.000072
N16T16TacGacA4052B.1.1.5190.001588
N16T16TacGacT1252B.1.1.5190.000477
N16T16TacGacT4651AY.440.00028
N16T16TacGacA551AY.440.00003
N16T16TacGacT4949B.1.177.810.009277
N16T16TacGacA3439B.1.1.10.011107
N16T16TacGacT539B.1.1.10.001633
N16T16TacGacT3032AY.46.60.002166
N16T16TacGacA232AY.46.60.000144
N16T16TacGacT3131AY.1020.000822
N16T16TacGacA2731B.1.1.630.010417
N16T16TacGacT431B.1.1.630.001543
N16T16TacGacA2929B.1.1.4340.010108
N16T16TacGacA2829B.1.466.20.010955
N16T16TacGacT129B.1.466.20.000391
N16T16TacGacT2828AY.450.003407
N16T16TacGacT2227B.1.3510.000654
N16T16TacGacA527B.1.3510.000149
N16T16TacGacT2525B.1.1.470.13369
N16T16TacGacT2525B.1.177.600.005461
N16T16TacGacA2424B.1.1.700.008186
N16T16TacGacT2324B.1.2430.0016
N16T16TacGacA124B.1.2430.00007
N16T16TacGacT2021AY.390.000494
N16T16TacGacC121AY.390.000025
N16T16TacGacT2121AY.98.10.001017
N16T16TacGacA1421B.1.1.2160.012467
N16T16TacGacT721B.1.1.2160.006233
N16T16TacGacA1320B.1.2580.000865
N16T16TacGacT720B.1.2580.000466
N16T16TacGacT1920B.1.5260.000447
N16T16TacGacA120B.1.5260.000024
N16T16TacGacA1719B.1.1.3050.065637
N16T16TacGacT219B.1.1.3050.007722
N16T16TacGacT1818AY.1190.000636
N16T16TacGacT1316AY.1210.001759
N16T16TacGacA316AY.1210.000406
N16T16TacGacT1515B.1.4990.015756
N16T16TacGacT1014AY.4.20.000217
N16T16TacGacA414AY.4.20.000087
N16T16TacGacA1114AY.980.000869
N16T16TacGacT314AY.980.000237
N16T16TacGacT1313AY.3.10.001108
N16T16TacGacT1313B.1.36.170.006423
N16T16TacGacA1013P.1.140.000478
N16T16TacGacT313P.1.140.000143
N16T16TacGacT1212AY.1200.000446
N16T16TacGacT911AY.60.00037
N16T16TacGacA211AY.60.000082
N16T16TacGacA1111B.1.5270.040741
N16T16TacGacT1111B.1.617.10.001419
N16T16TacGacT1010B.1.5170.00427
N16T16TacGacT1010B.1.5230.02451
N16T16TacGacT89AY.1180.000501
N16T16TacGacA19AY.1180.000063
N16T16TacGacT89AY.290.000126
N16T16TacGacA19AY.290.000016
N16T16TacGacT89AY.750.000448
N16T16TacGacA19AY.750.000056
N16T16TacGacA99B.1.177.720.030508
N16T16TacGacT89B.1.3960.005646
N16T16TacGacA19B.1.3960.000706
N16T16TacGacT58AY.9.20.000184
N16T16TacGacA38AY.9.20.00011
N16T16TacGacA88B.1.1.3540.035088
N16T16TacGacT58B.1.360.00073
N16T16TacGacA38B.1.360.000438
N16T16TacGacT77AY.260.000198
N16T16TacGacT77AY.360.001037
N16T16TacGacT77AY.410.002058
N16T16TacGacT67AY.480.002791
N16T16TacGacA17AY.480.000465
N16T16TacGacT67AY.610.000629
N16T16TacGacA17AY.610.000105
N16T16TacGacT56AY.200.000194
N16T16TacGacA16AY.200.000039
N16T16TacGacT66AY.50.000124
N16T16TacGacA66B.1.1.2650.018927
N16T16TacGacA66B.1.1.2910.004454
N16T16TacGacA66B.1.36.260.017143
N16T16TacGacT66B.1.499.10.666667
N16T16TacGacT46P.1.150.000929
N16T16TacGacA26P.1.150.000465
N16T16TacGacT55AY.1000.00023
N16T16TacGacT55AY.4.2.10.000745
N16T16TacGacA45B.1.1.250.002274
N16T16TacGacT15B.1.1.250.000569
N16T16TacGacT55B.1.258.140.004902
N16T16TacGacT35B.1.5250.000339
N16T16TacGacA25B.1.5250.000226
N16T16TacGacT55B.1.619.10.003207
N16T16TacGacT35B.1.6210.000266
N16T16TacGacA25B.1.6210.000177
N16T16TacGacT55P.20.000933
N16T16TacGacT44A.20.002647
N16T16TacGacA44AY.1140.000924
N16T16TacGacT44AY.120.10.001284
N16T16TacGacT44AY.20.001425
N16T16TacGacT34AY.460.000312
N16T16TacGacA14AY.460.000104
N16T16TacGacT34AY.470.000093
N16T16TacGacA14AY.470.000031
N16T16TacGacA34AY.770.003382
N16T16TacGacT14AY.770.001127
N16T16TacGacA44B.1.1.280.001245
N16T16TacGacT34B.1.1.4480.006098
N16T16TacGacA14B.1.1.4480.002033
N16T16TacGacA44B.1.1.5260.014184
N16T16TacGacA44B.1.1110.0047
N16T16TacGacT44B.1.177.750.004162
N16T16TacGacT34B.1.36.290.001552
N16T16TacGacA14B.1.36.290.000517
N16T16TacGacA44B.1.36.90.012862
N16T16TacGacA24B.1.5820.000981
N16T16TacGacT24B.1.5820.000981
N16T16TacGacT44B.1.5960.000349
N16T16TacGacT44C.370.000464
N16T16TacGacT44Q.80.00066
N16T16TacGacA23A.23.10.001408
N16T16TacGacT13A.23.10.000704
N16T16TacGacA23AY.1110.000366
N16T16TacGacT13AY.1110.000183
N16T16TacGacT33AY.1170.000254
N16T16TacGacA33AY.29.10.000662
N16T16TacGacT23AY.340.000194
N16T16TacGacA13AY.340.000097
N16T16TacGacT33AY.46.30.002801
N16T16TacGacT33AY.46.40.000494
N16T16TacGacA33AY.7.20.001678
N16T16TacGacA23B.1.1.2770.001517
N16T16TacGacT13B.1.1.2770.000759
N16T16TacGacT23B.1.1.3170.000823
N16T16TacGacA13B.1.1.3170.000412
N16T16TacGacA33B.1.1.3680.009259
N16T16TacGacT33B.1.1.3970.006757
N16T16TacGacA23B.1.177.730.001133
N16T16TacGacT13B.1.177.730.000566
N16T16TacGacA23B.1.177.80.001505
N16T16TacGacT13B.1.177.80.000752
N16T16TacGacT33B.1.2390.003663
N16T16TacGacT23B.1.36.180.00084
N16T16TacGacA13B.1.36.180.00042
N16T16TacGacT33B.1.4270.000151
N16T16TacGacT33B.1.4700.004213
N16T16TacGacT33B.1.5750.00091
N16T16TacGacT23B.1.5950.000522
N16T16TacGacA13B.1.5950.000261
N16T16TacGacA33B.400.001093
N16T16TacGacT33C.180.007772
N16T16TacGacT33C.310.053571
N16T16TacGacA23C.360.001821
N16T16TacGacT13C.360.000911
N16T16TacGacT22AY.1100.000225
N16T16TacGacT22AY.1130.000285
N16T16TacGacT22AY.16.10.00094
N16T16TacGacT22AY.230.000139
N16T16TacGacT22AY.270.000129
N16T16TacGacT22AY.330.000134
N16T16TacGacT22AY.350.000466
N16T16TacGacT22AY.370.000632
N16T16TacGacA22AY.39.10.000079
N16T16TacGacT22AY.680.000547
N16T16TacGacA12AY.690.000187
N16T16TacGacT12AY.690.000187
N16T16TacGacT12AY.75.10.00018
N16T16TacGacA12AY.75.10.00018
N16T16TacGacT22AY.840.000875
N16T16TacGacT22AY.9.10.000167
N16T16TacGacT22AY.930.000546
N16T16TacGacT22AY.99.20.000184
N16T16TacGacT22B.1.1.1290.018349
N16T16TacGacT12B.1.1.1410.002012
N16T16TacGacA12B.1.1.1410.002012
N16T16TacGacA22B.1.1.1590.009346
N16T16TacGacA22B.1.1.1980.002937
N16T16TacGacT22B.1.1.2070.002364
N16T16TacGacT22B.1.1.2670.020202
N16T16TacGacT22B.1.1.2970.004474
N16T16TacGacA22B.1.1.3780.014599
N16T16TacGacA22B.1.1.4320.002532
N16T16TacGacT22B.1.160.160.001859
N16T16TacGacT22B.1.177.40.000422
N16T16TacGacT22B.1.177.70.00033
N16T16TacGacA22B.1.1920.018519
N16T16TacGacA22B.1.2010.011364
N16T16TacGacT22B.1.220.002635
N16T16TacGacA12B.1.258.170.000104
N16T16TacGacT12B.1.258.170.000104
N16T16TacGacA22B.1.36.100.009569
N16T16TacGacT22B.1.36.220.002415
N16T16TacGacT22B.1.36.70.008
N16T16TacGacT22B.1.3670.001585
N16T16TacGacT22B.1.3690.00057
N16T16TacGacA22B.1.466.10.014388
N16T16TacGacA22B.1.5240.002813
N16T16TacGacT22B.1.5610.000794
N16T16TacGacT22B.1.5640.000852
N16T16TacGacA22B.1.6090.000959
N16T16TacGacT22B.1.88.10.009615
N16T16TacGacA22C.160.002121
N16T16TacGacA22C.230.011628
N16T16TacGacT22K.20.08
N16T16TacGacT12P.1.170.000162
N16T16TacGacA12P.1.170.000162
N16T16TacGacT22P.1.20.002312
N16T16TacGacT12Q.30.000145
N16T16TacGacA12Q.30.000145
N16T16TacGacA11A.190.009434
N16T16TacGacT11A.2.50.000499
N16T16TacGacT11A.270.001656
N16T16TacGacT11AU.20.002421
N16T16TacGacT11AY.100.00053
N16T16TacGacT11AY.1010.00049
N16T16TacGacT11AY.1060.000335
N16T16TacGacA11AY.1080.001103
N16T16TacGacT11AY.1160.000287
N16T16TacGacT11AY.116.10.000311
N16T16TacGacT11AY.310.018519
N16T16TacGacT11AY.380.000499
N16T16TacGacA11AY.4.10.000737
N16T16TacGacT11AY.4.40.000409
N16T16TacGacT11AY.400.000964
N16T16TacGacT11AY.46.10.001027
N16T16TacGacA11AY.5.40.000277
N16T16TacGacT11AY.510.000909
N16T16TacGacT11AY.520.000814
N16T16TacGacT11AY.560.001605
N16T16TacGacT11AY.620.000436
N16T16TacGacT11AY.640.000595
N16T16TacGacT11AY.70.000196
N16T16TacGacT11AY.7.10.000113
N16T16TacGacT11AY.720.001361
N16T16TacGacT11AY.730.000665
N16T16TacGacT11AY.780.001541
N16T16TacGacT11AY.860.00083
N16T16TacGacT11AY.90.000068
N16T16TacGacT11AY.910.00073
N16T16TacGacA11B0.000128
N16T16TacGacA11B.1.1.2200.001859
N16T16TacGacA11B.1.1.2220.000204
N16T16TacGacT11B.1.1.2310.003096
N16T16TacGacA11B.1.1.2730.006757
N16T16TacGacT11B.1.1.2850.006536
N16T16TacGacA11B.1.1.3060.000438
N16T16TacGacA11B.1.1.3690.000446
N16T16TacGacA11B.1.1.370.000193
N16T16TacGacA11B.1.1.3720.000689
N16T16TacGacT11B.1.1.4090.002833
N16T16TacGacA11B.1.1.4200.001006
N16T16TacGacA11B.1.1.460.004367
N16T16TacGacT11B.1.1.4830.038462
N16T16TacGacT11B.1.1.50.008333
N16T16TacGacT11B.1.1.5180.006329
N16T16TacGacA11B.1.1.5210.005348
N16T16TacGacA11B.1.1.580.005376
N16T16TacGacT11B.1.1.900.1
N16T16TacGacT11B.1.177.200.001517
N16T16TacGacA11B.1.177.230.003236
N16T16TacGacT11B.1.177.330.001645
N16T16TacGacA11B.1.177.420.000894
N16T16TacGacT11B.1.177.440.000519
N16T16TacGacT11B.1.177.450.000381
N16T16TacGacT11B.1.177.460.000918
N16T16TacGacT11B.1.177.570.000281
N16T16TacGacT11B.1.177.820.000477
N16T16TacGacT11B.1.2060.000816
N16T16TacGacT11B.1.2210.000071
N16T16TacGacT11B.1.2320.000537
N16T16TacGacT11B.1.2370.004975
N16T16TacGacA11B.1.3140.007519
N16T16TacGacA11B.1.3200.001245
N16T16TacGacT11B.1.3320.003497
N16T16TacGacT11B.1.3490.000715
N16T16TacGacT11B.1.351.20.000303
N16T16TacGacA11B.1.351.30.000876
N16T16TacGacT11B.1.36.160.001425
N16T16TacGacT11B.1.36.240.006173
N16T16TacGacT11B.1.36.350.002604
N16T16TacGacA11B.1.36.80.001
N16T16TacGacA11B.1.3810.007812
N16T16TacGacT11B.1.3950.007042
N16T16TacGacT11B.1.4000.000429
N16T16TacGacT11B.1.4020.009804
N16T16TacGacA11B.1.4250.002994
N16T16TacGacT11B.1.4260.001009
N16T16TacGacT11B.1.4430.004673
N16T16TacGacT11B.1.4520.013699
N16T16TacGacT11B.1.4670.04
N16T16TacGacA11B.1.4970.000315
N16T16TacGacT11B.1.5600.00463
N16T16TacGacT11B.1.5700.002941
N16T16TacGacT11B.1.5710.009709
N16T16TacGacT11B.1.5760.000907
N16T16TacGacT11B.1.5770.000687
N16T16TacGacT11B.1.6280.000352
N16T16TacGacT11B.1.6370.000073
N16T16TacGacA11B.1.9.40.006135
N16T16TacGacT11B.390.002331
N16T16TacGacT11B.4.50.011905
N16T16TacGacA11C.330.058824
N16T16TacGacT11C.36.30.000567
N16T16TacGacA11C.90.030303
N16T16TacGacA11N.60.007092
N16T16TacGacT11P.1.10.000318
N16T16TacGacA11P.1.120.000484
N16T16TacGacT11P.1.160.000374
N16T16TacGacT11P.1.70.000319
N16T16TacGacT11Q.10.000126
N16T16TacGacT11R.10.00009