CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = S412R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N412S412RnonsynAgcCgc15019149340.9943429507-29509
N412S412RnonsynagCagA15019600.0039949429507-29509
N412S412RnonsynagCagG15019210.0013982329507-29509
N412S412RnonsynAgCCgT1501940.00026632929507-29509

Details of the mutation S412R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N412S412RAgcCgc1493415019All0.002856
N412S412RagCagA6015019All0.000011
N412S412RagCagG2115019All0.000004
N412S412RAgCCgT415019All0.000001
N412S412RAgcCgc1470814712AY.270.951912
N412S412RAgCCgT414712AY.270.000259
N412S412RAgcCgc6767AY.370.021176
N412S412RAgcCgc4951B.1.617.20.000185
N412S412RagCagA251B.1.617.20.000008
N412S412RagCagA2429B.1.1.70.000021
N412S412RagCagG429B.1.1.70.000004
N412S412RAgcCgc129B.1.1.70.000001
N412S412RAgcCgc1616AY.160.006074
N412S412RAgcCgc1314AY.430.000058
N412S412RagCagA114AY.430.000004
N412S412RAgcCgc1212AY.740.001388
N412S412RAgcCgc1111AY.75.10.001983
N412S412RagCagA811B.10.000073
N412S412RAgcCgc311B.10.000027
N412S412RAgcCgc1010AY.470.000311
N412S412RagCagG88AY.120.10.002568
N412S412RAgcCgc88AY.200.000311
N412S412RAgcCgc47AY.250.000024
N412S412RagCagA37AY.250.000018
N412S412RAgcCgc66AY.260.00017
N412S412RagCagG55AY.40.000008
N412S412RAgcCgc55AY.620.002179
N412S412RagCagA44AY.1030.000025
N412S412RAgcCgc44AY.90.00027
N412S412RagCagA34B.1.20.000026
N412S412RAgcCgc14B.1.20.000009
N412S412RAgcCgc33AY.750.000168
N412S412RagCagA33AY.940.001328
N412S412RagCagA22A.10.000564
N412S412RAgcCgc22AY.39.10.000079
N412S412RAgcCgc22AY.670.000929
N412S412RagCagG12B.1.1.10.000327
N412S412RagCagA12B.1.1.10.000327
N412S412RAgcCgc22B.1.3510.000059
N412S412RagCagA22B.1.5960.000174
N412S412RagCagG110.055556
N412S412RagCagA11A.2.50.000499
N412S412RAgcCgc11AY.1130.000142
N412S412RAgcCgc11AY.360.000148
N412S412RAgcCgc11AY.390.000025
N412S412RagCagA11AY.440.000006
N412S412RAgcCgc11AY.610.000105
N412S412RagCagA11B0.000128
N412S412RagCagG11B.1.1770.000013
N412S412RagCagA11B.1.177.730.000566
N412S412RagCagG11B.1.177.860.000183
N412S412RAgcCgc11B.1.36.180.00042
N412S412RAgcCgc11B.1.6040.017241
N412S412RAgcCgc11B.400.000364
N412S412RagCagA11C.36.30.000567
N412S412RagCagA11P.20.000187
N412S412RagCagA11Q.80.000165