CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = S33R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N33S33RnonsynagTagG44240.54545528370-28372
N33S33RnonsynagTagA44170.38636428370-28372
N33S33RnonsynAgtCgt4430.068181828370-28372

Details of the mutation S33R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N33S33RagTagG2444All0.000005
N33S33RagTagA1744All0.000003
N33S33RAgtCgt344All0.000001
N33S33RagTagG88AY.40.000012
N33S33RagTagG66B.1.3510.000178
N33S33RagTagA34B.1.1770.00004
N33S33RagTagG14B.1.1770.000013
N33S33RagTagA33B.1.1.1890.004539
N33S33RagTagG22AY.700.000417
N33S33RagTagA22B.1.177.600.000437
N33S33RagTagG22B.1.20.000018
N33S33RagTagA22B.1.2430.000139
N33S33RAgtCgt12B.1.617.20.000004
N33S33RagTagA12B.1.617.20.000004
N33S33RagTagG11AY.1030.000006
N33S33RAgtCgt11AY.140.000088
N33S33RagTagG11AY.390.000025
N33S33RAgtCgt11B.10.000009
N33S33RagTagG11B.1.1.3060.000438
N33S33RagTagA11B.1.1.4380.05
N33S33RagTagA11B.1.2210.000071
N33S33RagTagG11B.1.4160.001269
N33S33RagTagA11B.1.4280.00102
N33S33RagTagA11B.1.5260.000024
N33S33RagTagA11B.1.5380.008065
N33S33RagTagA11B.1.5650.00081
N33S33RagTagG11P.20.000187