CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 327 | S327S | syn | tcG | tcT | 22246 | 18410 | 0.827564 | 29252-29254 | |
N | 327 | S327S | syn | tcG | tcA | 22246 | 3727 | 0.167536 | 29252-29254 | |
N | 327 | S327S | syn | tcG | tcC | 22246 | 109 | 0.00489976 | 29252-29254 |
Details of the mutation S327S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 327 | S327S | tcG | tcT | 18410 | 22246 | All | 0.003521 |
N | 327 | S327S | tcG | tcA | 3727 | 22246 | All | 0.000713 |
N | 327 | S327S | tcG | tcC | 109 | 22246 | All | 0.000021 |
N | 327 | S327S | tcG | tcT | 4621 | 4755 | AY.4 | 0.007192 |
N | 327 | S327S | tcG | tcA | 113 | 4755 | AY.4 | 0.000176 |
N | 327 | S327S | tcG | tcC | 21 | 4755 | AY.4 | 0.000033 |
N | 327 | S327S | tcG | tcT | 1507 | 2370 | B.1.1.7 | 0.001349 |
N | 327 | S327S | tcG | tcA | 841 | 2370 | B.1.1.7 | 0.000753 |
N | 327 | S327S | tcG | tcC | 22 | 2370 | B.1.1.7 | 0.00002 |
N | 327 | S327S | tcG | tcT | 1396 | 1396 | AY.64 | 0.830952 |
N | 327 | S327S | tcG | tcT | 1111 | 1345 | B.1.617.2 | 0.004183 |
N | 327 | S327S | tcG | tcA | 230 | 1345 | B.1.617.2 | 0.000866 |
N | 327 | S327S | tcG | tcC | 4 | 1345 | B.1.617.2 | 0.000015 |
N | 327 | S327S | tcG | tcT | 1089 | 1089 | B.1.588 | 0.990901 |
N | 327 | S327S | tcG | tcT | 1074 | 1075 | AY.12 | 0.339444 |
N | 327 | S327S | tcG | tcA | 1 | 1075 | AY.12 | 0.000316 |
N | 327 | S327S | tcG | tcT | 605 | 633 | B.1 | 0.005542 |
N | 327 | S327S | tcG | tcA | 26 | 633 | B.1 | 0.000238 |
N | 327 | S327S | tcG | tcC | 2 | 633 | B.1 | 0.000018 |
N | 327 | S327S | tcG | tcT | 397 | 567 | AY.44 | 0.002416 |
N | 327 | S327S | tcG | tcA | 170 | 567 | AY.44 | 0.001035 |
N | 327 | S327S | tcG | tcT | 366 | 555 | AY.43 | 0.001622 |
N | 327 | S327S | tcG | tcA | 186 | 555 | AY.43 | 0.000824 |
N | 327 | S327S | tcG | tcC | 3 | 555 | AY.43 | 0.000013 |
N | 327 | S327S | tcG | tcA | 519 | 528 | B.1.221 | 0.036866 |
N | 327 | S327S | tcG | tcT | 9 | 528 | B.1.221 | 0.000639 |
N | 327 | S327S | tcG | tcT | 509 | 509 | B.1.587 | 0.965844 |
N | 327 | S327S | tcG | tcT | 366 | 436 | B.1.526 | 0.008603 |
N | 327 | S327S | tcG | tcA | 70 | 436 | B.1.526 | 0.001645 |
N | 327 | S327S | tcG | tcT | 280 | 371 | AY.25 | 0.001684 |
N | 327 | S327S | tcG | tcA | 91 | 371 | AY.25 | 0.000547 |
N | 327 | S327S | tcG | tcT | 366 | 366 | B.1.551 | 0.472258 |
N | 327 | S327S | tcG | tcT | 340 | 349 | AY.100 | 0.015642 |
N | 327 | S327S | tcG | tcA | 8 | 349 | AY.100 | 0.000368 |
N | 327 | S327S | tcG | tcC | 1 | 349 | AY.100 | 0.000046 |
N | 327 | S327S | tcG | tcT | 227 | 289 | AY.103 | 0.001409 |
N | 327 | S327S | tcG | tcA | 57 | 289 | AY.103 | 0.000354 |
N | 327 | S327S | tcG | tcC | 5 | 289 | AY.103 | 0.000031 |
N | 327 | S327S | tcG | tcT | 249 | 273 | AY.4.2 | 0.0054 |
N | 327 | S327S | tcG | tcA | 24 | 273 | AY.4.2 | 0.000521 |
N | 327 | S327S | tcG | tcT | 220 | 225 | AY.113 | 0.031326 |
N | 327 | S327S | tcG | tcA | 5 | 225 | AY.113 | 0.000712 |
N | 327 | S327S | tcG | tcT | 170 | 215 | B.1.2 | 0.001497 |
N | 327 | S327S | tcG | tcA | 45 | 215 | B.1.2 | 0.000396 |
N | 327 | S327S | tcG | tcT | 119 | 191 | AY.3 | 0.001184 |
N | 327 | S327S | tcG | tcA | 72 | 191 | AY.3 | 0.000716 |
N | 327 | S327S | tcG | tcT | 171 | 184 | B.1.1 | 0.003102 |
N | 327 | S327S | tcG | tcA | 13 | 184 | B.1.1 | 0.000236 |
N | 327 | S327S | tcG | tcT | 162 | 181 | AY.26 | 0.004586 |
N | 327 | S327S | tcG | tcA | 19 | 181 | AY.26 | 0.000538 |
N | 327 | S327S | tcG | tcA | 180 | 180 | S.1 | 0.891089 |
N | 327 | S327S | tcG | tcT | 130 | 155 | P.1 | 0.002048 |
N | 327 | S327S | tcG | tcA | 25 | 155 | P.1 | 0.000394 |
N | 327 | S327S | tcG | tcT | 96 | 135 | AY.39 | 0.002372 |
N | 327 | S327S | tcG | tcA | 38 | 135 | AY.39 | 0.000939 |
N | 327 | S327S | tcG | tcC | 1 | 135 | AY.39 | 0.000025 |
N | 327 | S327S | tcG | tcA | 124 | 124 | B.1.1.218 | 0.953846 |
N | 327 | S327S | tcG | tcT | 109 | 122 | B.1.177 | 0.001435 |
N | 327 | S327S | tcG | tcA | 13 | 122 | B.1.177 | 0.000171 |
N | 327 | S327S | tcG | tcT | 104 | 115 | AY.102 | 0.002757 |
N | 327 | S327S | tcG | tcA | 10 | 115 | AY.102 | 0.000265 |
N | 327 | S327S | tcG | tcC | 1 | 115 | AY.102 | 0.000027 |
N | 327 | S327S | tcG | tcA | 56 | 110 | AY.29 | 0.000883 |
N | 327 | S327S | tcG | tcT | 53 | 110 | AY.29 | 0.000836 |
N | 327 | S327S | tcG | tcC | 1 | 110 | AY.29 | 0.000016 |
N | 327 | S327S | tcG | tcA | 56 | 105 | B.1.1.519 | 0.002224 |
N | 327 | S327S | tcG | tcT | 49 | 105 | B.1.1.519 | 0.001946 |
N | 327 | S327S | tcG | tcT | 82 | 99 | B.1.36 | 0.011964 |
N | 327 | S327S | tcG | tcC | 9 | 99 | B.1.36 | 0.001313 |
N | 327 | S327S | tcG | tcA | 8 | 99 | B.1.36 | 0.001167 |
N | 327 | S327S | tcG | tcT | 92 | 92 | B.1.385 | 0.978723 |
N | 327 | S327S | tcG | tcT | 82 | 82 | B.1.1.170 | 0.102244 |
N | 327 | S327S | tcG | tcA | 51 | 80 | AY.46.4 | 0.00839 |
N | 327 | S327S | tcG | tcT | 29 | 80 | AY.46.4 | 0.004771 |
N | 327 | S327S | tcG | tcT | 73 | 80 | B.1.595 | 0.01905 |
N | 327 | S327S | tcG | tcA | 7 | 80 | B.1.595 | 0.001827 |
N | 327 | S327S | tcG | tcT | 68 | 76 | B.1.351 | 0.002021 |
N | 327 | S327S | tcG | tcA | 8 | 76 | B.1.351 | 0.000238 |
N | 327 | S327S | tcG | tcA | 43 | 68 | B.1.429 | 0.001012 |
N | 327 | S327S | tcG | tcT | 15 | 68 | B.1.429 | 0.000353 |
N | 327 | S327S | tcG | tcC | 10 | 68 | B.1.429 | 0.000235 |
N | 327 | S327S | tcG | tcA | 62 | 63 | AD.2 | 0.013576 |
N | 327 | S327S | tcG | tcC | 1 | 63 | AD.2 | 0.000219 |
N | 327 | S327S | tcG | tcA | 53 | 62 | AY.24 | 0.022845 |
N | 327 | S327S | tcG | tcT | 9 | 62 | AY.24 | 0.003879 |
N | 327 | S327S | tcG | tcT | 53 | 61 | AY.20 | 0.00206 |
N | 327 | S327S | tcG | tcA | 8 | 61 | AY.20 | 0.000311 |
N | 327 | S327S | tcG | tcT | 57 | 61 | AY.23 | 0.003976 |
N | 327 | S327S | tcG | tcA | 4 | 61 | AY.23 | 0.000279 |
N | 327 | S327S | tcG | tcT | 53 | 59 | AY.45 | 0.006449 |
N | 327 | S327S | tcG | tcA | 6 | 59 | AY.45 | 0.00073 |
N | 327 | S327S | tcG | tcT | 50 | 58 | B.1.243 | 0.003479 |
N | 327 | S327S | tcG | tcA | 8 | 58 | B.1.243 | 0.000557 |
N | 327 | S327S | tcG | tcT | 56 | 56 | B.1.1.334 | 0.918033 |
N | 327 | S327S | tcG | tcT | 46 | 53 | AY.120 | 0.00171 |
N | 327 | S327S | tcG | tcA | 6 | 53 | AY.120 | 0.000223 |
N | 327 | S327S | tcG | tcC | 1 | 53 | AY.120 | 0.000037 |
N | 327 | S327S | tcG | tcA | 40 | 53 | AY.47 | 0.001244 |
N | 327 | S327S | tcG | tcT | 13 | 53 | AY.47 | 0.000404 |
N | 327 | S327S | tcG | tcT | 48 | 48 | B.1.465 | 0.18251 |
N | 327 | S327S | tcG | tcA | 29 | 47 | AY.3.1 | 0.002473 |
N | 327 | S327S | tcG | tcT | 18 | 47 | AY.3.1 | 0.001535 |
N | 327 | S327S | tcG | tcT | 44 | 47 | B.1.621 | 0.003895 |
N | 327 | S327S | tcG | tcA | 3 | 47 | B.1.621 | 0.000266 |
N | 327 | S327S | tcG | tcT | 46 | 46 | AY.13 | 0.007405 |
N | 327 | S327S | tcG | tcT | 41 | 45 | AY.75 | 0.002297 |
N | 327 | S327S | tcG | tcA | 4 | 45 | AY.75 | 0.000224 |
N | 327 | S327S | tcG | tcT | 44 | 44 | B.1.466.2 | 0.017214 |
N | 327 | S327S | tcG | tcA | 22 | 43 | B.1.525 | 0.00249 |
N | 327 | S327S | tcG | tcT | 15 | 43 | B.1.525 | 0.001697 |
N | 327 | S327S | tcG | tcC | 6 | 43 | B.1.525 | 0.000679 |
N | 327 | S327S | tcG | tcA | 36 | 41 | AY.95 | 0.027397 |
N | 327 | S327S | tcG | tcT | 5 | 41 | AY.95 | 0.003805 |
N | 327 | S327S | tcG | tcT | 40 | 40 | B.1.1.50 | 0.027155 |
N | 327 | S327S | tcG | tcT | 36 | 38 | B.1.637 | 0.002631 |
N | 327 | S327S | tcG | tcA | 2 | 38 | B.1.637 | 0.000146 |
N | 327 | S327S | tcG | tcT | 34 | 36 | AY.119 | 0.0012 |
N | 327 | S327S | tcG | tcA | 2 | 36 | AY.119 | 0.000071 |
N | 327 | S327S | tcG | tcT | 36 | 36 | B.1.623 | 0.019313 |
N | 327 | S327S | tcG | tcA | 18 | 34 | AY.59 | 0.009534 |
N | 327 | S327S | tcG | tcT | 16 | 34 | AY.59 | 0.008475 |
N | 327 | S327S | tcG | tcT | 27 | 34 | B.1.160 | 0.000842 |
N | 327 | S327S | tcG | tcC | 6 | 34 | B.1.160 | 0.000187 |
N | 327 | S327S | tcG | tcA | 1 | 34 | B.1.160 | 0.000031 |
N | 327 | S327S | tcG | tcT | 32 | 33 | AY.46.6 | 0.002311 |
N | 327 | S327S | tcG | tcA | 1 | 33 | AY.46.6 | 0.000072 |
N | 327 | S327S | tcG | tcT | 32 | 32 | AY.4.5 | 0.00344 |
N | 327 | S327S | tcG | tcT | 31 | 32 | P.1.16 | 0.011597 |
N | 327 | S327S | tcG | tcA | 1 | 32 | P.1.16 | 0.000374 |
N | 327 | S327S | tcG | tcA | 21 | 31 | AY.72 | 0.028571 |
N | 327 | S327S | tcG | tcT | 10 | 31 | AY.72 | 0.013605 |
N | 327 | S327S | tcG | tcT | 28 | 31 | AY.99.2 | 0.00258 |
N | 327 | S327S | tcG | tcA | 3 | 31 | AY.99.2 | 0.000276 |
N | 327 | S327S | tcG | tcT | 24 | 28 | AY.6 | 0.000987 |
N | 327 | S327S | tcG | tcA | 4 | 28 | AY.6 | 0.000165 |
N | 327 | S327S | tcG | tcT | 24 | 28 | AY.61 | 0.002515 |
N | 327 | S327S | tcG | tcA | 4 | 28 | AY.61 | 0.000419 |
N | 327 | S327S | tcG | tcT | 22 | 28 | AY.65 | 0.011727 |
N | 327 | S327S | tcG | tcA | 6 | 28 | AY.65 | 0.003198 |
N | 327 | S327S | tcG | tcT | 14 | 27 | AY.39.1 | 0.000555 |
N | 327 | S327S | tcG | tcA | 12 | 27 | AY.39.1 | 0.000475 |
N | 327 | S327S | tcG | tcC | 1 | 27 | AY.39.1 | 0.00004 |
N | 327 | S327S | tcG | tcT | 26 | 26 | B.1.1.70 | 0.008868 |
N | 327 | S327S | tcG | tcT | 26 | 26 | B.1.588.1 | 1 |
N | 327 | S327S | tcG | tcA | 19 | 24 | B.1.1.306 | 0.00833 |
N | 327 | S327S | tcG | tcT | 4 | 24 | B.1.1.306 | 0.001754 |
N | 327 | S327S | tcG | tcC | 1 | 24 | B.1.1.306 | 0.000438 |
N | 327 | S327S | tcG | tcT | 21 | 23 | AY.106 | 0.007033 |
N | 327 | S327S | tcG | tcA | 2 | 23 | AY.106 | 0.00067 |
N | 327 | S327S | tcG | tcT | 23 | 23 | B.1.399 | 0.044487 |
N | 327 | S327S | tcG | tcT | 23 | 23 | B.1.408 | 0.084871 |
N | 327 | S327S | tcG | tcT | 22 | 22 | AY.67 | 0.010214 |
N | 327 | S327S | tcG | tcT | 17 | 20 | AY.42 | 0.000684 |
N | 327 | S327S | tcG | tcA | 3 | 20 | AY.42 | 0.000121 |
N | 327 | S327S | tcG | tcT | 15 | 20 | B.1.258 | 0.000998 |
N | 327 | S327S | tcG | tcA | 5 | 20 | B.1.258 | 0.000333 |
N | 327 | S327S | tcG | tcT | 16 | 19 | AY.117 | 0.001352 |
N | 327 | S327S | tcG | tcA | 3 | 19 | AY.117 | 0.000254 |
N | 327 | S327S | tcG | tcT | 18 | 19 | AY.34.1 | 0.009179 |
N | 327 | S327S | tcG | tcC | 1 | 19 | AY.34.1 | 0.00051 |
N | 327 | S327S | tcG | tcT | 18 | 18 | AY.109 | 0.013314 |
N | 327 | S327S | tcG | tcT | 17 | 17 | AY.75.1 | 0.003065 |
N | 327 | S327S | tcG | tcT | 14 | 17 | P.1.14 | 0.000669 |
N | 327 | S327S | tcG | tcA | 2 | 17 | P.1.14 | 0.000096 |
N | 327 | S327S | tcG | tcC | 1 | 17 | P.1.14 | 0.000048 |
N | 327 | S327S | tcG | tcA | 11 | 17 | P.1.17 | 0.001779 |
N | 327 | S327S | tcG | tcT | 6 | 17 | P.1.17 | 0.000971 |
N | 327 | S327S | tcG | tcT | 16 | 16 | AY.9 | 0.001082 |
N | 327 | S327S | tcG | tcT | 12 | 15 | B.1.617.1 | 0.001548 |
N | 327 | S327S | tcG | tcA | 3 | 15 | B.1.617.1 | 0.000387 |
N | 327 | S327S | tcG | tcT | 14 | 14 | AY.69 | 0.002613 |
N | 327 | S327S | tcG | tcT | 13 | 14 | AY.88 | 0.011494 |
N | 327 | S327S | tcG | tcA | 1 | 14 | AY.88 | 0.000884 |
N | 327 | S327S | tcG | tcA | 7 | 14 | B | 0.000895 |
N | 327 | S327S | tcG | tcT | 7 | 14 | B | 0.000895 |
N | 327 | S327S | tcG | tcT | 9 | 14 | P.2 | 0.00168 |
N | 327 | S327S | tcG | tcA | 5 | 14 | P.2 | 0.000933 |
N | 327 | S327S | tcG | tcT | 9 | 13 | AY.33 | 0.000601 |
N | 327 | S327S | tcG | tcA | 3 | 13 | AY.33 | 0.0002 |
N | 327 | S327S | tcG | tcC | 1 | 13 | AY.33 | 0.000067 |
N | 327 | S327S | tcG | tcA | 10 | 13 | B.1.1.189 | 0.015129 |
N | 327 | S327S | tcG | tcT | 3 | 13 | B.1.1.189 | 0.004539 |
N | 327 | S327S | tcG | tcT | 8 | 12 | AY.46 | 0.000833 |
N | 327 | S327S | tcG | tcA | 4 | 12 | AY.46 | 0.000416 |
N | 327 | S327S | tcG | tcT | 11 | 12 | B.1.1.222 | 0.002244 |
N | 327 | S327S | tcG | tcA | 1 | 12 | B.1.1.222 | 0.000204 |
N | 327 | S327S | tcG | tcT | 12 | 12 | B.1.131 | 0.105263 |
N | 327 | S327S | tcG | tcT | 12 | 12 | B.1.146 | 0.050847 |
N | 327 | S327S | tcG | tcT | 12 | 12 | B.1.160.20 | 0.107143 |
N | 327 | S327S | tcG | tcT | 11 | 12 | B.1.596 | 0.000959 |
N | 327 | S327S | tcG | tcC | 1 | 12 | B.1.596 | 0.000087 |
N | 327 | S327S | tcG | tcT | 10 | 12 | Q.1 | 0.001263 |
N | 327 | S327S | tcG | tcA | 2 | 12 | Q.1 | 0.000253 |
N | 327 | S327S | tcG | tcT | 11 | 11 | A.5 | 0.021154 |
N | 327 | S327S | tcG | tcT | 10 | 11 | AY.121 | 0.001353 |
N | 327 | S327S | tcG | tcA | 1 | 11 | AY.121 | 0.000135 |
N | 327 | S327S | tcG | tcT | 10 | 11 | AY.85 | 0.004272 |
N | 327 | S327S | tcG | tcA | 1 | 11 | AY.85 | 0.000427 |
N | 327 | S327S | tcG | tcA | 11 | 11 | AY.90 | 0.007529 |
N | 327 | S327S | tcG | tcT | 10 | 10 | AE.8 | 0.00489 |
N | 327 | S327S | tcG | tcT | 9 | 10 | AY.9.2 | 0.000331 |
N | 327 | S327S | tcG | tcA | 1 | 10 | AY.9.2 | 0.000037 |
N | 327 | S327S | tcG | tcT | 7 | 10 | AY.98 | 0.000553 |
N | 327 | S327S | tcG | tcA | 3 | 10 | AY.98 | 0.000237 |
N | 327 | S327S | tcG | tcT | 8 | 10 | B.1.1.214 | 0.000444 |
N | 327 | S327S | tcG | tcA | 2 | 10 | B.1.1.214 | 0.000111 |
N | 327 | S327S | tcG | tcT | 9 | 10 | B.1.177.21 | 0.000688 |
N | 327 | S327S | tcG | tcA | 1 | 10 | B.1.177.21 | 0.000076 |
N | 327 | S327S | tcG | tcT | 10 | 10 | B.1.567 | 0.033333 |
N | 327 | S327S | tcG | tcT | 7 | 9 | AY.55 | 0.006422 |
N | 327 | S327S | tcG | tcA | 2 | 9 | AY.55 | 0.001835 |
N | 327 | S327S | tcG | tcT | 8 | 9 | AY.74 | 0.000925 |
N | 327 | S327S | tcG | tcA | 1 | 9 | AY.74 | 0.000116 |
N | 327 | S327S | tcG | tcT | 9 | 9 | B.1.222 | 0.015228 |
N | 327 | S327S | tcG | tcT | 9 | 9 | B.1.619.1 | 0.005773 |
N | 327 | S327S | tcG | tcT | 7 | 9 | C.37 | 0.000812 |
N | 327 | S327S | tcG | tcA | 2 | 9 | C.37 | 0.000232 |
N | 327 | S327S | tcG | tcT | 6 | 8 | AY.14 | 0.000528 |
N | 327 | S327S | tcG | tcA | 2 | 8 | AY.14 | 0.000176 |
N | 327 | S327S | tcG | tcT | 8 | 8 | B.1.1.136 | 0.170213 |
N | 327 | S327S | tcG | tcT | 8 | 8 | B.1.1.169 | 0.145455 |
N | 327 | S327S | tcG | tcT | 8 | 8 | B.1.1.319 | 0.140351 |
N | 327 | S327S | tcG | tcT | 8 | 8 | B.1.239 | 0.009768 |
N | 327 | S327S | tcG | tcT | 6 | 8 | B.1.311 | 0.001647 |
N | 327 | S327S | tcG | tcA | 2 | 8 | B.1.311 | 0.000549 |
N | 327 | S327S | tcG | tcT | 7 | 8 | B.1.396 | 0.00494 |
N | 327 | S327S | tcG | tcA | 1 | 8 | B.1.396 | 0.000706 |
N | 327 | S327S | tcG | tcT | 6 | 8 | P.1.10 | 0.001617 |
N | 327 | S327S | tcG | tcA | 2 | 8 | P.1.10 | 0.000539 |
N | 327 | S327S | tcG | tcA | 7 | 7 | AH.1 | 1 |
N | 327 | S327S | tcG | tcT | 6 | 7 | AY.116 | 0.001721 |
N | 327 | S327S | tcG | tcA | 1 | 7 | AY.116 | 0.000287 |
N | 327 | S327S | tcG | tcA | 4 | 7 | AY.120.1 | 0.001284 |
N | 327 | S327S | tcG | tcT | 3 | 7 | AY.120.1 | 0.000963 |
N | 327 | S327S | tcG | tcT | 6 | 7 | AY.16.1 | 0.00282 |
N | 327 | S327S | tcG | tcA | 1 | 7 | AY.16.1 | 0.00047 |
N | 327 | S327S | tcG | tcA | 7 | 7 | AY.9.1 | 0.000586 |
N | 327 | S327S | tcG | tcT | 6 | 7 | B.1.1.1 | 0.00196 |
N | 327 | S327S | tcG | tcA | 1 | 7 | B.1.1.1 | 0.000327 |
N | 327 | S327S | tcG | tcT | 7 | 7 | B.1.1.225 | 0.05036 |
N | 327 | S327S | tcG | tcT | 6 | 7 | B.1.1.28 | 0.001867 |
N | 327 | S327S | tcG | tcA | 1 | 7 | B.1.1.28 | 0.000311 |
N | 327 | S327S | tcG | tcT | 7 | 7 | B.1.177.82 | 0.003341 |
N | 327 | S327S | tcG | tcA | 5 | 7 | B.1.258.17 | 0.00052 |
N | 327 | S327S | tcG | tcT | 2 | 7 | B.1.258.17 | 0.000208 |
N | 327 | S327S | tcG | tcT | 7 | 7 | C.23 | 0.040698 |
N | 327 | S327S | tcG | tcT | 7 | 7 | P.1.7 | 0.002235 |
N | 327 | S327S | tcG | tcA | 3 | 6 | AY.16 | 0.001139 |
N | 327 | S327S | tcG | tcT | 3 | 6 | AY.16 | 0.001139 |
N | 327 | S327S | tcG | tcT | 4 | 6 | AY.27 | 0.000259 |
N | 327 | S327S | tcG | tcC | 2 | 6 | AY.27 | 0.000129 |
N | 327 | S327S | tcG | tcT | 6 | 6 | AY.34 | 0.000582 |
N | 327 | S327S | tcG | tcT | 6 | 6 | AY.36 | 0.000889 |
N | 327 | S327S | tcG | tcT | 6 | 6 | AY.83 | 0.010345 |
N | 327 | S327S | tcG | tcA | 6 | 6 | B.1.1.128 | 0.042553 |
N | 327 | S327S | tcG | tcT | 6 | 6 | B.1.1.141 | 0.012072 |
N | 327 | S327S | tcG | tcA | 5 | 6 | B.1.1.63 | 0.001929 |
N | 327 | S327S | tcG | tcT | 1 | 6 | B.1.1.63 | 0.000386 |
N | 327 | S327S | tcG | tcT | 6 | 6 | B.1.177.86 | 0.001101 |
N | 327 | S327S | tcG | tcT | 6 | 6 | B.1.362 | 0.009245 |
N | 327 | S327S | tcG | tcT | 3 | 6 | B.1.427 | 0.000151 |
N | 327 | S327S | tcG | tcA | 2 | 6 | B.1.427 | 0.000101 |
N | 327 | S327S | tcG | tcC | 1 | 6 | B.1.427 | 0.00005 |
N | 327 | S327S | tcG | tcT | 5 | 6 | B.40 | 0.001821 |
N | 327 | S327S | tcG | tcA | 1 | 6 | B.40 | 0.000364 |
N | 327 | S327S | tcG | tcT | 6 | 6 | N.2 | 0.230769 |
N | 327 | S327S | tcG | tcT | 6 | 6 | P.1.1 | 0.001906 |
N | 327 | S327S | tcG | tcT | 5 | 6 | Q.8 | 0.000825 |
N | 327 | S327S | tcG | tcC | 1 | 6 | Q.8 | 0.000165 |
N | 327 | S327S | tcG | tcT | 4 | 5 | A.2.5 | 0.001996 |
N | 327 | S327S | tcG | tcA | 1 | 5 | A.2.5 | 0.000499 |
N | 327 | S327S | tcG | tcA | 3 | 5 | AY.1 | 0.001187 |
N | 327 | S327S | tcG | tcT | 2 | 5 | AY.1 | 0.000791 |
N | 327 | S327S | tcG | tcA | 4 | 5 | AY.104 | 0.007937 |
N | 327 | S327S | tcG | tcT | 1 | 5 | AY.104 | 0.001984 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.118 | 0.000313 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.4.2.1 | 0.000745 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.41 | 0.00147 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.46.5 | 0.000992 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.5 | 0.000103 |
N | 327 | S327S | tcG | tcT | 4 | 5 | AY.68 | 0.001095 |
N | 327 | S327S | tcG | tcA | 1 | 5 | AY.68 | 0.000274 |
N | 327 | S327S | tcG | tcT | 4 | 5 | AY.70 | 0.000834 |
N | 327 | S327S | tcG | tcA | 1 | 5 | AY.70 | 0.000209 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.71 | 0.002375 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.78 | 0.007704 |
N | 327 | S327S | tcG | tcT | 5 | 5 | AY.84 | 0.002187 |
N | 327 | S327S | tcG | tcA | 3 | 5 | AY.98.1 | 0.000145 |
N | 327 | S327S | tcG | tcT | 2 | 5 | AY.98.1 | 0.000097 |
N | 327 | S327S | tcG | tcT | 5 | 5 | B.1.1.311 | 0.001791 |
N | 327 | S327S | tcG | tcT | 5 | 5 | B.1.1.316 | 0.004625 |
N | 327 | S327S | tcG | tcT | 4 | 5 | B.1.1.33 | 0.001684 |
N | 327 | S327S | tcG | tcA | 1 | 5 | B.1.1.33 | 0.000421 |
N | 327 | S327S | tcG | tcT | 5 | 5 | B.1.1.397 | 0.011261 |
N | 327 | S327S | tcG | tcA | 4 | 5 | B.1.1.464 | 0.005891 |
N | 327 | S327S | tcG | tcT | 1 | 5 | B.1.1.464 | 0.001473 |
N | 327 | S327S | tcG | tcT | 3 | 5 | B.1.240 | 0.000647 |
N | 327 | S327S | tcG | tcA | 2 | 5 | B.1.240 | 0.000431 |
N | 327 | S327S | tcG | tcT | 4 | 5 | B.1.561 | 0.001588 |
N | 327 | S327S | tcG | tcA | 1 | 5 | B.1.561 | 0.000397 |
N | 327 | S327S | tcG | tcT | 4 | 5 | D.2 | 0.0003 |
N | 327 | S327S | tcG | tcA | 1 | 5 | D.2 | 0.000075 |
N | 327 | S327S | tcG | tcT | 3 | 4 | 0.166667 | |
N | 327 | S327S | tcG | tcC | 1 | 4 | 0.055556 | |
N | 327 | S327S | tcG | tcT | 4 | 4 | AY.23.1 | 0.001669 |
N | 327 | S327S | tcG | tcT | 4 | 4 | AY.4.4 | 0.001637 |
N | 327 | S327S | tcG | tcT | 4 | 4 | B.1.1.317 | 0.001647 |
N | 327 | S327S | tcG | tcT | 4 | 4 | B.1.1.318 | 0.001207 |
N | 327 | S327S | tcG | tcA | 3 | 4 | B.1.1.5 | 0.025 |
N | 327 | S327S | tcG | tcT | 1 | 4 | B.1.1.5 | 0.008333 |
N | 327 | S327S | tcG | tcA | 4 | 4 | B.1.234 | 0.000528 |
N | 327 | S327S | tcG | tcT | 2 | 4 | C.1 | 0.004785 |
N | 327 | S327S | tcG | tcA | 2 | 4 | C.1 | 0.004785 |
N | 327 | S327S | tcG | tcT | 2 | 3 | A.2.5.2 | 0.003145 |
N | 327 | S327S | tcG | tcA | 1 | 3 | A.2.5.2 | 0.001572 |
N | 327 | S327S | tcG | tcA | 3 | 3 | AM.4 | 0.010714 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.105 | 0.001929 |
N | 327 | S327S | tcG | tcT | 2 | 3 | AY.107 | 0.000932 |
N | 327 | S327S | tcG | tcA | 1 | 3 | AY.107 | 0.000466 |
N | 327 | S327S | tcG | tcA | 3 | 3 | AY.108 | 0.003308 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.111 | 0.000549 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.29.1 | 0.000662 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.32 | 0.001597 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.46.1 | 0.00308 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.46.3 | 0.002801 |
N | 327 | S327S | tcG | tcA | 3 | 3 | AY.54 | 0.000286 |
N | 327 | S327S | tcG | tcT | 2 | 3 | AY.62 | 0.000871 |
N | 327 | S327S | tcG | tcA | 1 | 3 | AY.62 | 0.000436 |
N | 327 | S327S | tcG | tcT | 3 | 3 | AY.99 | 0.003148 |
N | 327 | S327S | tcG | tcT | 2 | 3 | B.1.1.176 | 0.000879 |
N | 327 | S327S | tcG | tcA | 1 | 3 | B.1.1.176 | 0.000439 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.1.216 | 0.002671 |
N | 327 | S327S | tcG | tcT | 2 | 3 | B.1.1.25 | 0.001137 |
N | 327 | S327S | tcG | tcA | 1 | 3 | B.1.1.25 | 0.000569 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.1.26 | 0.015707 |
N | 327 | S327S | tcG | tcT | 2 | 3 | B.1.1.277 | 0.001517 |
N | 327 | S327S | tcG | tcA | 1 | 3 | B.1.1.277 | 0.000759 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.1.348 | 0.002389 |
N | 327 | S327S | tcG | tcA | 3 | 3 | B.1.1.448 | 0.006098 |
N | 327 | S327S | tcG | tcT | 2 | 3 | B.1.110.3 | 0.001437 |
N | 327 | S327S | tcG | tcA | 1 | 3 | B.1.110.3 | 0.000718 |
N | 327 | S327S | tcG | tcA | 3 | 3 | B.1.140 | 0.056604 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.177.15 | 0.001893 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.177.87 | 0.002183 |
N | 327 | S327S | tcG | tcA | 3 | 3 | B.1.210 | 0.006397 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.36.7 | 0.012 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.575 | 0.00091 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.617.3 | 0.008955 |
N | 327 | S327S | tcG | tcT | 3 | 3 | B.1.618 | 0.012097 |
N | 327 | S327S | tcG | tcT | 3 | 3 | C.36 | 0.002732 |
N | 327 | S327S | tcG | tcT | 3 | 3 | C.36.3 | 0.001702 |
N | 327 | S327S | tcG | tcA | 3 | 3 | N.5 | 0.0053 |
N | 327 | S327S | tcG | tcT | 2 | 2 | A | 0.000774 |
N | 327 | S327S | tcG | tcT | 2 | 2 | A.23.1 | 0.001408 |
N | 327 | S327S | tcG | tcT | 1 | 2 | AY.110 | 0.000113 |
N | 327 | S327S | tcG | tcA | 1 | 2 | AY.110 | 0.000113 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.46.2 | 0.001271 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.5.3 | 0.000675 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.52 | 0.001629 |
N | 327 | S327S | tcG | tcA | 1 | 2 | AY.53 | 0.000288 |
N | 327 | S327S | tcG | tcT | 1 | 2 | AY.53 | 0.000288 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.60 | 0.001876 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.73 | 0.001331 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.91 | 0.001461 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.92 | 0.000575 |
N | 327 | S327S | tcG | tcT | 2 | 2 | AY.99.1 | 0.003106 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.1.163 | 0.015267 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.1.171 | 0.007353 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.1.198 | 0.002937 |
N | 327 | S327S | tcG | tcA | 2 | 2 | B.1.1.265 | 0.006309 |
N | 327 | S327S | tcG | tcA | 1 | 2 | B.1.1.326 | 0.001761 |
N | 327 | S327S | tcG | tcT | 1 | 2 | B.1.1.326 | 0.001761 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.1.351 | 0.005587 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.1.434 | 0.000697 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.1.46 | 0.008734 |
N | 327 | S327S | tcG | tcT | 1 | 2 | B.1.177.33 | 0.001645 |
N | 327 | S327S | tcG | tcC | 1 | 2 | B.1.177.33 | 0.001645 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.177.72 | 0.00678 |
N | 327 | S327S | tcG | tcA | 2 | 2 | B.1.3 | 0.005236 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.36.1 | 0.002281 |
N | 327 | S327S | tcG | tcC | 1 | 2 | B.1.36.17 | 0.000494 |
N | 327 | S327S | tcG | tcT | 1 | 2 | B.1.36.17 | 0.000494 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.36.19 | 0.018519 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.36.29 | 0.001035 |
N | 327 | S327S | tcG | tcA | 1 | 2 | B.1.36.31 | 0.001751 |
N | 327 | S327S | tcG | tcT | 1 | 2 | B.1.36.31 | 0.001751 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.367 | 0.001585 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.398 | 0.005952 |
N | 327 | S327S | tcG | tcT | 1 | 2 | B.1.415.1 | 0.007576 |
N | 327 | S327S | tcG | tcA | 1 | 2 | B.1.415.1 | 0.007576 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.462 | 0.014493 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.471 | 0.005464 |
N | 327 | S327S | tcG | tcC | 2 | 2 | B.1.480 | 0.004975 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.574 | 0.004301 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.577 | 0.001375 |
N | 327 | S327S | tcG | tcA | 2 | 2 | B.1.582 | 0.000981 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.1.612 | 0.005305 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.26 | 0.029412 |
N | 327 | S327S | tcG | tcT | 2 | 2 | B.4.1 | 0.037736 |
N | 327 | S327S | tcG | tcT | 1 | 2 | C.1.2 | 0.004255 |
N | 327 | S327S | tcG | tcA | 1 | 2 | C.1.2 | 0.004255 |
N | 327 | S327S | tcG | tcA | 1 | 2 | C.35 | 0.000774 |
N | 327 | S327S | tcG | tcT | 1 | 2 | C.35 | 0.000774 |
N | 327 | S327S | tcG | tcT | 2 | 2 | N.6 | 0.014184 |
N | 327 | S327S | tcG | tcT | 2 | 2 | P.1.12 | 0.000968 |
N | 327 | S327S | tcG | tcT | 2 | 2 | P.1.13 | 0.001797 |
N | 327 | S327S | tcG | tcA | 1 | 2 | P.1.15 | 0.000232 |
N | 327 | S327S | tcG | tcT | 1 | 2 | P.1.15 | 0.000232 |
N | 327 | S327S | tcG | tcT | 2 | 2 | R.1 | 0.00018 |
N | 327 | S327S | tcG | tcT | 1 | 1 | A.2 | 0.000662 |
N | 327 | S327S | tcG | tcT | 1 | 1 | A.23 | 0.010526 |
N | 327 | S327S | tcG | tcT | 1 | 1 | A.27 | 0.001656 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AE.1 | 0.011364 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AT.1 | 0.005128 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.10 | 0.00053 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.101 | 0.00049 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.120.2 | 0.001285 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.17 | 0.008197 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.19 | 0.00114 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.2 | 0.000356 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.30 | 0.000396 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.31 | 0.018519 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.35 | 0.000233 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.37 | 0.000316 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.38 | 0.000499 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.39.2 | 0.001541 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.4.1 | 0.000737 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.40 | 0.000964 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.48 | 0.000465 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.50 | 0.000799 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.7 | 0.000196 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.7.1 | 0.000113 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.7.2 | 0.000559 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.77 | 0.001127 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.8 | 0.000606 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.82 | 0.001357 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.86 | 0.00083 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.87 | 0.000833 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.89 | 0.004902 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.9.2.1 | 0.001976 |
N | 327 | S327S | tcG | tcA | 1 | 1 | AY.93 | 0.000273 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AY.94 | 0.000443 |
N | 327 | S327S | tcG | tcT | 1 | 1 | AZ.3 | 0.00152 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.135 | 0.004695 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.153 | 0.001095 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.204 | 0.00304 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.1.220 | 0.001859 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.241 | 0.00207 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.272 | 0.005208 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.273 | 0.006757 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.284 | 0.000107 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.291 | 0.000742 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.302 | 0.002075 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.312 | 0.001912 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.315 | 0.008475 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.340 | 0.045455 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.1.354 | 0.004386 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.369 | 0.000446 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.37 | 0.000193 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.39 | 0.00051 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.404 | 0.015873 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.409 | 0.002833 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.424 | 0.045455 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.517 | 0.006803 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.54 | 0.003021 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.56 | 0.017857 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.71 | 0.006061 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.1.90 | 0.1 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.111 | 0.001175 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.159 | 0.012195 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.160.8 | 0.001289 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.164 | 0.014925 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.177.11 | 0.001698 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.177.16 | 0.000664 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.177.18 | 0.00116 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.177.35 | 0.000691 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.177.4 | 0.000211 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.177.54 | 0.000606 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.177.60 | 0.000218 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.177.73 | 0.000566 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.177.77 | 0.000726 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.177.8 | 0.000752 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.214.1 | 0.02 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.214.2 | 0.0006 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.218 | 0.005155 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.221.1 | 0.002907 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.258.14 | 0.00098 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.258.16 | 0.001637 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.284 | 0.013158 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.349 | 0.000715 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.351.3 | 0.000876 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.36.10 | 0.004785 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.36.2 | 0.010753 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.36.25 | 0.002208 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.36.27 | 0.000763 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.36.8 | 0.001 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.361 | 0.001289 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.369 | 0.000285 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.380 | 0.006623 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.413 | 0.004255 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.417 | 0.028571 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.425 | 0.002994 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.437 | 0.020833 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.438.1 | 0.000107 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.442 | 0.035714 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.452 | 0.013699 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.453 | 0.003236 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.459 | 0.004082 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.499 | 0.00105 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.538 | 0.008065 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.542 | 0.03125 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.558 | 0.004566 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.564.1 | 0.001577 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.565 | 0.00081 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.576 | 0.000907 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.590 | 0.004545 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.593 | 0.01087 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.609 | 0.000479 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.621.1 | 0.000506 |
N | 327 | S327S | tcG | tcA | 1 | 1 | B.1.625 | 0.002353 |
N | 327 | S327S | tcG | tcT | 1 | 1 | B.1.628 | 0.000352 |
N | 327 | S327S | tcG | tcT | 1 | 1 | C.18 | 0.002591 |
N | 327 | S327S | tcG | tcA | 1 | 1 | L.3 | 0.003546 |
N | 327 | S327S | tcG | tcA | 1 | 1 | P.1.11 | 0.010204 |
N | 327 | S327S | tcG | tcT | 1 | 1 | Q.3 | 0.000145 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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