CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = S235T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N235S235TnonsynTctAct13100.76923128976-28978
N235S235TnonsynTcTAcC1320.15384628976-28978
N235S235TnonsynTcTAcG1310.076923128976-28978

Details of the mutation S235T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N235S235TTctAct1013All0.000002
N235S235TTcTAcC213All0
N235S235TTcTAcG113All0
N235S235TTctAct33B.10.000027
N235S235TTctAct22B.1.617.20.000008
N235S235TTcTAcC11AY.1030.000006
N235S235TTctAct11AY.30.00001
N235S235TTctAct11AY.40.000002
N235S235TTcTAcC11AY.75.10.00018
N235S235TTcTAcG11AY.850.000427
N235S235TTctAct11AY.9.20.000037
N235S235TTctAct11B.1.177.500.004695
N235S235TTctAct11B.1.6090.000479