CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 202 | S202S | syn | AGt | TCt | 127419 | 127038 | 0.99701 | 28877-28879 | |
N | 202 | S202S | syn | agT | agC | 127419 | 357 | 0.00280178 | 28877-28879 | |
N | 202 | S202S | syn | AGT | TCC | 127419 | 22 | 0.000172659 | 28877-28879 | |
N | 202 | S202S | syn | AGT | TCA | 127419 | 1 | 0.00000784812 | 28877-28879 | |
N | 202 | S202S | syn | AGT | TCG | 127419 | 1 | 0.00000784812 | 28877-28879 |
Details of the mutation S202S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 202 | S202S | AGt | TCt | 127038 | 127419 | All | 0.024298 |
N | 202 | S202S | agT | agC | 357 | 127419 | All | 0.000068 |
N | 202 | S202S | AGT | TCC | 22 | 127419 | All | 0.000004 |
N | 202 | S202S | AGT | TCG | 1 | 127419 | All | 0 |
N | 202 | S202S | AGT | TCA | 1 | 127419 | All | 0 |
N | 202 | S202S | AGt | TCt | 60648 | 60660 | P.1 | 0.955448 |
N | 202 | S202S | AGT | TCC | 12 | 60660 | P.1 | 0.000189 |
N | 202 | S202S | AGt | TCt | 20801 | 20803 | P.1.14 | 0.994312 |
N | 202 | S202S | AGT | TCC | 2 | 20803 | P.1.14 | 0.000096 |
N | 202 | S202S | AGt | TCt | 15026 | 15044 | B.1.1.7 | 0.013452 |
N | 202 | S202S | agT | agC | 14 | 15044 | B.1.1.7 | 0.000013 |
N | 202 | S202S | AGT | TCC | 4 | 15044 | B.1.1.7 | 0.000004 |
N | 202 | S202S | AGt | TCt | 5316 | 5316 | P.1.17 | 0.859916 |
N | 202 | S202S | AGt | TCt | 4132 | 4135 | P.1.15 | 0.960037 |
N | 202 | S202S | AGT | TCC | 2 | 4135 | P.1.15 | 0.000465 |
N | 202 | S202S | AGT | TCA | 1 | 4135 | P.1.15 | 0.000232 |
N | 202 | S202S | AGt | TCt | 3587 | 3587 | P.1.10 | 0.966586 |
N | 202 | S202S | AGt | TCt | 3069 | 3070 | P.1.7 | 0.979885 |
N | 202 | S202S | AGT | TCC | 1 | 3070 | P.1.7 | 0.000319 |
N | 202 | S202S | AGt | TCt | 2523 | 2523 | P.1.16 | 0.943883 |
N | 202 | S202S | AGt | TCt | 2143 | 2144 | P.1.1 | 0.68075 |
N | 202 | S202S | AGT | TCC | 1 | 2144 | P.1.1 | 0.000318 |
N | 202 | S202S | AGt | TCt | 1328 | 1329 | P.1.12 | 0.642788 |
N | 202 | S202S | AGT | TCG | 1 | 1329 | P.1.12 | 0.000484 |
N | 202 | S202S | AGt | TCt | 1086 | 1086 | P.1.13 | 0.975741 |
N | 202 | S202S | AGt | TCt | 1027 | 1027 | P.1.17.1 | 0.898513 |
N | 202 | S202S | AGt | TCt | 1023 | 1023 | P.1.4 | 0.999023 |
N | 202 | S202S | AGt | TCt | 856 | 856 | P.1.2 | 0.989595 |
N | 202 | S202S | AGt | TCt | 762 | 763 | B.1.1.519 | 0.03026 |
N | 202 | S202S | agT | agC | 1 | 763 | B.1.1.519 | 0.00004 |
N | 202 | S202S | AGt | TCt | 514 | 514 | P.1.6 | 1 |
N | 202 | S202S | AGt | TCt | 456 | 458 | B.1.1 | 0.008272 |
N | 202 | S202S | agT | agC | 2 | 458 | B.1.1 | 0.000036 |
N | 202 | S202S | AGt | TCt | 272 | 272 | B.1.1.214 | 0.015084 |
N | 202 | S202S | AGt | TCt | 238 | 238 | C.37.1 | 0.623037 |
N | 202 | S202S | AGt | TCt | 208 | 208 | P.1.9 | 1 |
N | 202 | S202S | AGt | TCt | 206 | 206 | P.1.8 | 0.985646 |
N | 202 | S202S | AGt | TCt | 185 | 185 | Q.8 | 0.030508 |
N | 202 | S202S | AGt | TCt | 168 | 168 | B.1.1.528 | 0.807692 |
N | 202 | S202S | agT | agC | 117 | 117 | B.1.564 | 0.04983 |
N | 202 | S202S | AGt | TCt | 114 | 114 | B.1.1.322 | 1 |
N | 202 | S202S | agT | agC | 96 | 105 | AY.25 | 0.000577 |
N | 202 | S202S | AGt | TCt | 9 | 105 | AY.25 | 0.000054 |
N | 202 | S202S | AGt | TCt | 100 | 100 | P.1.10.1 | 0.813008 |
N | 202 | S202S | AGt | TCt | 98 | 98 | P.1.11 | 1 |
N | 202 | S202S | AGt | TCt | 82 | 85 | B.1 | 0.000751 |
N | 202 | S202S | agT | agC | 3 | 85 | B.1 | 0.000027 |
N | 202 | S202S | AGt | TCt | 60 | 60 | Q.1 | 0.00758 |
N | 202 | S202S | AGt | TCt | 59 | 59 | B.1.1.416 | 0.053394 |
N | 202 | S202S | AGt | TCt | 47 | 47 | AY.4.2.1 | 0.007002 |
N | 202 | S202S | AGt | TCt | 41 | 41 | B.1.1.222 | 0.008364 |
N | 202 | S202S | AGt | TCt | 40 | 40 | B.1.1.39 | 0.020387 |
N | 202 | S202S | AGt | TCt | 37 | 37 | Q.3 | 0.005366 |
N | 202 | S202S | AGt | TCt | 34 | 34 | B.1.1.289 | 0.070833 |
N | 202 | S202S | AGt | TCt | 32 | 33 | B.1.1.28 | 0.00996 |
N | 202 | S202S | agT | agC | 1 | 33 | B.1.1.28 | 0.000311 |
N | 202 | S202S | AGt | TCt | 33 | 33 | B.1.1.408 | 0.916667 |
N | 202 | S202S | AGt | TCt | 33 | 33 | C.37 | 0.00383 |
N | 202 | S202S | AGt | TCt | 31 | 31 | C.16 | 0.032874 |
N | 202 | S202S | AGt | TCt | 29 | 29 | P.1.3 | 1 |
N | 202 | S202S | agT | agC | 28 | 28 | B.1.1.428 | 0.264151 |
N | 202 | S202S | AGt | TCt | 28 | 28 | B.1.1.434 | 0.009759 |
N | 202 | S202S | AGt | TCt | 21 | 21 | P.1.10.2 | 0.875 |
N | 202 | S202S | AGt | TCt | 14 | 20 | AY.44 | 0.000085 |
N | 202 | S202S | agT | agC | 6 | 20 | AY.44 | 0.000037 |
N | 202 | S202S | AGt | TCt | 20 | 20 | R.1 | 0.0018 |
N | 202 | S202S | AGt | TCt | 19 | 19 | B.1.1.277 | 0.014416 |
N | 202 | S202S | AGt | TCt | 19 | 19 | B.1.1.324 | 1 |
N | 202 | S202S | AGt | TCt | 11 | 17 | B.1.617.2 | 0.000041 |
N | 202 | S202S | agT | agC | 6 | 17 | B.1.617.2 | 0.000023 |
N | 202 | S202S | agT | agC | 15 | 16 | AY.4 | 0.000023 |
N | 202 | S202S | AGt | TCt | 1 | 16 | AY.4 | 0.000002 |
N | 202 | S202S | AGt | TCt | 14 | 14 | B.1.1.161 | 0.04947 |
N | 202 | S202S | AGt | TCt | 10 | 14 | D.2 | 0.00075 |
N | 202 | S202S | agT | agC | 4 | 14 | D.2 | 0.0003 |
N | 202 | S202S | AGt | TCt | 13 | 13 | P.1.5 | 1 |
N | 202 | S202S | AGt | TCt | 12 | 12 | B.1.1.318 | 0.003621 |
N | 202 | S202S | AGt | TCt | 12 | 12 | P.2 | 0.00224 |
N | 202 | S202S | AGt | TCt | 11 | 11 | AY.101 | 0.005395 |
N | 202 | S202S | AGt | TCt | 11 | 11 | B.1.1.253 | 0.027569 |
N | 202 | S202S | AGt | TCt | 11 | 11 | B.1.1.63 | 0.004244 |
N | 202 | S202S | AGt | TCt | 11 | 11 | B.1.1.74 | 0.047414 |
N | 202 | S202S | AGt | TCt | 9 | 11 | B.1.621 | 0.000797 |
N | 202 | S202S | agT | agC | 2 | 11 | B.1.621 | 0.000177 |
N | 202 | S202S | AGt | TCt | 10 | 10 | AY.34 | 0.00097 |
N | 202 | S202S | AGt | TCt | 10 | 10 | B.1.1.216 | 0.008905 |
N | 202 | S202S | AGt | TCt | 9 | 9 | AE.8 | 0.004401 |
N | 202 | S202S | AGt | TCt | 9 | 9 | B.1.1.33 | 0.003788 |
N | 202 | S202S | AGt | TCt | 9 | 9 | B.1.1.4 | 0.026786 |
N | 202 | S202S | agT | agC | 7 | 9 | B.1.2 | 0.000062 |
N | 202 | S202S | AGt | TCt | 2 | 9 | B.1.2 | 0.000018 |
N | 202 | S202S | agT | agC | 5 | 8 | AY.3 | 0.00005 |
N | 202 | S202S | AGt | TCt | 3 | 8 | AY.3 | 0.00003 |
N | 202 | S202S | AGt | TCt | 8 | 8 | B.1.1.507 | 0.069565 |
N | 202 | S202S | AGt | TCt | 7 | 7 | B.1.1.207 | 0.008274 |
N | 202 | S202S | AGt | TCt | 7 | 7 | B.1.1.25 | 0.00398 |
N | 202 | S202S | AGt | TCt | 7 | 7 | B.1.1.265 | 0.022082 |
N | 202 | S202S | AGt | TCt | 7 | 7 | B.1.1.315 | 0.059322 |
N | 202 | S202S | AGt | TCt | 7 | 7 | B.1.1.317 | 0.002882 |
N | 202 | S202S | AGt | TCt | 6 | 6 | AD.2 | 0.001314 |
N | 202 | S202S | AGt | TCt | 4 | 6 | AY.102 | 0.000106 |
N | 202 | S202S | agT | agC | 2 | 6 | AY.102 | 0.000053 |
N | 202 | S202S | AGt | TCt | 6 | 6 | AZ.2 | 0.004926 |
N | 202 | S202S | AGt | TCt | 6 | 6 | B.1.1.1 | 0.00196 |
N | 202 | S202S | AGt | TCt | 6 | 6 | B.1.1.176 | 0.002636 |
N | 202 | S202S | AGt | TCt | 6 | 6 | B.1.1.34 | 0.078947 |
N | 202 | S202S | AGt | TCt | 6 | 6 | B.1.1.348 | 0.004777 |
N | 202 | S202S | AGt | TCt | 6 | 6 | B.1.1.56 | 0.107143 |
N | 202 | S202S | agT | agC | 4 | 6 | B.1.429 | 0.000094 |
N | 202 | S202S | AGt | TCt | 2 | 6 | B.1.429 | 0.000047 |
N | 202 | S202S | AGt | TCt | 6 | 6 | C.36.1 | 0.024896 |
N | 202 | S202S | AGt | TCt | 5 | 5 | B.1.1.294 | 0.006329 |
N | 202 | S202S | AGt | TCt | 5 | 5 | B.1.1.311 | 0.001791 |
N | 202 | S202S | AGt | TCt | 5 | 5 | B.1.1.316 | 0.004625 |
N | 202 | S202S | AGt | TCt | 5 | 5 | B.1.1.37 | 0.000964 |
N | 202 | S202S | AGt | TCt | 5 | 5 | B.1.526 | 0.000118 |
N | 202 | S202S | agT | agC | 3 | 4 | AY.43 | 0.000013 |
N | 202 | S202S | AGt | TCt | 1 | 4 | AY.43 | 0.000004 |
N | 202 | S202S | AGt | TCt | 4 | 4 | B.1.1.192 | 0.009238 |
N | 202 | S202S | AGt | TCt | 4 | 4 | B.1.1.284 | 0.00043 |
N | 202 | S202S | AGt | TCt | 4 | 4 | B.1.1.327 | 0.4 |
N | 202 | S202S | AGt | TCt | 4 | 4 | B.1.1.409 | 0.011331 |
N | 202 | S202S | agT | agC | 4 | 4 | B.1.160 | 0.000125 |
N | 202 | S202S | agT | agC | 4 | 4 | B.1.369 | 0.001141 |
N | 202 | S202S | AGt | TCt | 4 | 4 | C.38 | 0.032258 |
N | 202 | S202S | AGt | TCt | 3 | 3 | AY.103 | 0.000019 |
N | 202 | S202S | AGt | TCt | 3 | 3 | AZ.4 | 0.010067 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.220 | 0.005576 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.312 | 0.005736 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.351 | 0.00838 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.386 | 0.2 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.429 | 0.013825 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.486 | 0.004732 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.51 | 0.005155 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.1.523 | 0.004687 |
N | 202 | S202S | agT | agC | 2 | 3 | B.1.177 | 0.000026 |
N | 202 | S202S | AGt | TCt | 1 | 3 | B.1.177 | 0.000013 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.311 | 0.000824 |
N | 202 | S202S | agT | agC | 3 | 3 | B.1.36 | 0.000438 |
N | 202 | S202S | AGt | TCt | 3 | 3 | B.1.533 | 0.028846 |
N | 202 | S202S | AGt | TCt | 3 | 3 | C.36 | 0.002732 |
N | 202 | S202S | AGt | TCt | 3 | 3 | C.36.3 | 0.001702 |
N | 202 | S202S | AGt | TCt | 3 | 3 | L.1 | 0.005714 |
N | 202 | S202S | AGt | TCt | 2 | 2 | AY.100 | 0.000092 |
N | 202 | S202S | agT | agC | 2 | 2 | AY.119 | 0.000071 |
N | 202 | S202S | AGt | TCt | 2 | 2 | AY.26 | 0.000057 |
N | 202 | S202S | AGt | TCt | 2 | 2 | AY.3.1 | 0.000171 |
N | 202 | S202S | agT | agC | 2 | 2 | AY.46 | 0.000208 |
N | 202 | S202S | AGt | TCt | 2 | 2 | AY.54 | 0.000191 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.121 | 0.004854 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.279 | 0.002242 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.305 | 0.007722 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.369 | 0.000892 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.432 | 0.002532 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.54 | 0.006042 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.1.70 | 0.000682 |
N | 202 | S202S | AGt | TCt | 1 | 2 | B.1.221 | 0.000071 |
N | 202 | S202S | agT | agC | 1 | 2 | B.1.221 | 0.000071 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.324 | 0.00321 |
N | 202 | S202S | AGt | TCt | 1 | 2 | B.1.351 | 0.00003 |
N | 202 | S202S | agT | agC | 1 | 2 | B.1.351 | 0.00003 |
N | 202 | S202S | agT | agC | 2 | 2 | B.1.36.8 | 0.002 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.560 | 0.009259 |
N | 202 | S202S | AGt | TCt | 2 | 2 | B.1.596 | 0.000174 |
N | 202 | S202S | AGt | TCt | 2 | 2 | D.5 | 0.00995 |
N | 202 | S202S | AGt | TCt | 2 | 2 | M.1 | 0.046512 |
N | 202 | S202S | AGt | TCt | 2 | 2 | N.9 | 0.011905 |
N | 202 | S202S | agT | agC | 1 | 1 | 0.055556 | |
N | 202 | S202S | AGt | TCt | 1 | 1 | A.2.5 | 0.000499 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.105 | 0.000643 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.116 | 0.000287 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.12 | 0.000316 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.120.1 | 0.000321 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.20 | 0.000039 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.24 | 0.000431 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.34.1 | 0.00051 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.36 | 0.000148 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.4.2 | 0.000022 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.40 | 0.000964 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.42 | 0.00004 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.46.4 | 0.000165 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.47 | 0.000031 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.5 | 0.000021 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.52 | 0.000814 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.65 | 0.000533 |
N | 202 | S202S | agT | agC | 1 | 1 | AY.74 | 0.000116 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AY.75.1 | 0.00018 |
N | 202 | S202S | AGt | TCt | 1 | 1 | AZ.1 | 0.000867 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B | 0.000128 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.10 | 0.001115 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.117 | 0.009709 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.141 | 0.002012 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.144 | 0.028571 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.171 | 0.003676 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.198 | 0.001468 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.203 | 0.016949 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.1.225 | 0.007194 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.236 | 0.006897 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.241 | 0.00207 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.254 | 0.011236 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.280 | 0.003086 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.283 | 0.023256 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.296 | 0.018182 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.298 | 0.000862 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.326 | 0.001761 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.331 | 0.011628 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.333 | 0.001076 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.337 | 0.003597 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.344 | 0.010753 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.359 | 0.027778 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.362 | 0.005618 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.371 | 0.010417 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.372 | 0.000689 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.377 | 0.001381 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.387 | 0.058824 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.389 | 0.006061 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.398 | 0.003226 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.402 | 0.011111 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.417 | 0.002703 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.450 | 0.034483 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.48 | 0.002874 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.50 | 0.000679 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.518 | 0.006329 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.61 | 0.008772 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.83 | 0.00271 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.1.99 | 0.02381 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.139 | 0.000733 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.177.73 | 0.000566 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.222 | 0.001692 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.243 | 0.00007 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.258.22 | 0.002667 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.356 | 0.001727 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.36.29 | 0.000517 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.36.36 | 0.000602 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.361 | 0.001289 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.375 | 0.00082 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.497 | 0.000315 |
N | 202 | S202S | agT | agC | 1 | 1 | B.1.530 | 0.007143 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.580 | 0.004065 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.620 | 0.000946 |
N | 202 | S202S | AGt | TCt | 1 | 1 | B.1.623 | 0.000536 |
N | 202 | S202S | AGt | TCt | 1 | 1 | C.1 | 0.002392 |
N | 202 | S202S | AGt | TCt | 1 | 1 | C.30.1 | 0.006711 |
N | 202 | S202S | AGt | TCt | 1 | 1 | C.35 | 0.000774 |
N | 202 | S202S | AGt | TCt | 1 | 1 | C.39 | 0.018868 |
N | 202 | S202S | AGt | TCt | 1 | 1 | N.5 | 0.001767 |
N | 202 | S202S | AGt | TCt | 1 | 1 | P.4 | 0.003802 |
N | 202 | S202S | AGt | TCt | 1 | 1 | P.7 | 0.004367 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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