CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = S180R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N180S180RnonsynagTagG48360.7528811-28813
N180S180RnonsynAgtCgt4880.16666728811-28813
N180S180RnonsynagTagA4830.062528811-28813
N180S180RnonsynAgTCgA4810.020833328811-28813

Details of the mutation S180R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N180S180RagTagG3648All0.000007
N180S180RAgtCgt848All0.000002
N180S180RagTagA348All0.000001
N180S180RAgTCgA148All0
N180S180RagTagG1212B.1.617.20.000045
N180S180RagTagG1010AY.75.10.001803
N180S180RAgtCgt45B.10.000037
N180S180RagTagG15B.10.000009
N180S180RAgtCgt34AY.40.000005
N180S180RAgTCgA14AY.40.000002
N180S180RagTagG44B.1.6090.001918
N180S180RagTagG220.111111
N180S180RagTagA11AY.230.00007
N180S180RagTagG11AY.250.000006
N180S180RagTagG11AY.330.000067
N180S180RagTagA11AY.880.000884
N180S180RagTagG11B.1.1.4090.002833
N180S180RAgtCgt11B.1.1600.000031
N180S180RagTagG11B.1.1800.05
N180S180RagTagG11B.1.2580.000067
N180S180RagTagA11B.1.351.30.000876
N180S180RagTagG11B.1.360.000146
N180S180RagTagG11P.1.10.000318