CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = R40C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N40R40CnonsynCgtTgt19361936128391-28393

Details of the mutation R40C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N40R40CCgtTgt19361936All0.00037
N40R40CCgtTgt531531B.1.1.70.000475
N40R40CCgtTgt201201S.10.99505
N40R40CCgtTgt176176B.1.1.2170.64
N40R40CCgtTgt136136AY.30.001353
N40R40CCgtTgt118118AY.40.000184
N40R40CCgtTgt5252B.1.617.20.000196
N40R40CCgtTgt3636B.10.00033
N40R40CCgtTgt3030C.36.30.017016
N40R40CCgtTgt2828R.10.00252
N40R40CCgtTgt2323AY.1030.000143
N40R40CCgtTgt2323AY.440.00014
N40R40CCgtTgt2323B.1.5260.000541
N40R40CCgtTgt2222AY.430.000097
N40R40CCgtTgt2222B.1.10.000399
N40R40CCgtTgt2222C.370.002553
N40R40CCgtTgt1919AY.260.000538
N40R40CCgtTgt1616AY.250.000096
N40R40CCgtTgt1616AY.46.60.001155
N40R40CCgtTgt1313B.1.1600.000405
N40R40CCgtTgt1313B.1.20.000114
N40R40CCgtTgt1313P.10.000205
N40R40CCgtTgt1212AY.340.001164
N40R40CCgtTgt1111AY.1190.000388
N40R40CCgtTgt1111AY.640.006548
N40R40CCgtTgt1111B.1.1.3110.00394
N40R40CCgtTgt1010P.1.140.000478
N40R40CCgtTgt99AY.10.003562
N40R40CCgtTgt99AY.1130.001282
N40R40CCgtTgt99AY.610.000943
N40R40CCgtTgt88B.1.1.500.005431
N40R40CCgtTgt88B.1.177.460.007346
N40R40CCgtTgt88B.1.4270.000404
N40R40CCgtTgt77AY.470.000218
N40R40CCgtTgt77AY.50.000145
N40R40CCgtTgt77B0.000895
N40R40CCgtTgt77B.1.1.5190.000278
N40R40CCgtTgt77B.1.1770.000092
N40R40CCgtTgt66AY.460.000624
N40R40CCgtTgt66B.1.1.100.006689
N40R40CCgtTgt55AY.3.10.000426
N40R40CCgtTgt55AY.7.10.000564
N40R40CCgtTgt55AY.740.000578
N40R40CCgtTgt55B.1.1.3290.019231
N40R40CCgtTgt55B.1.1.700.001705
N40R40CCgtTgt55B.1.1470.003779
N40R40CCgtTgt55B.1.177.70.000824
N40R40CCgtTgt55B.1.2340.00066
N40R40CCgtTgt55B.1.2580.000333
N40R40CCgtTgt55B.1.6210.000443
N40R40CCgtTgt55N.50.008834
N40R40CCgtTgt44AY.1200.000149
N40R40CCgtTgt44AY.390.000099
N40R40CCgtTgt44AY.540.000381
N40R40CCgtTgt44AY.60.000165
N40R40CCgtTgt44AY.750.000224
N40R40CCgtTgt44B.1.1.10.001307
N40R40CCgtTgt44B.1.1.1570.003653
N40R40CCgtTgt44B.1.220.00527
N40R40CCgtTgt33AY.1020.00008
N40R40CCgtTgt33AY.330.0002
N40R40CCgtTgt33AY.46.40.000494
N40R40CCgtTgt33AY.98.10.000145
N40R40CCgtTgt33B.1.1.1410.006036
N40R40CCgtTgt33B.1.1.4330.004274
N40R40CCgtTgt33B.1.36.350.007812
N40R40CCgtTgt33B.1.4290.000071
N40R40CCgtTgt33B.1.5820.001472
N40R40CCgtTgt33B.1.617.10.000387
N40R40CCgtTgt33B.60.00273
N40R40CCgtTgt22A.10.000564
N40R40CCgtTgt22AY.1070.000932
N40R40CCgtTgt22AY.1180.000125
N40R40CCgtTgt22AY.160.000759
N40R40CCgtTgt22AY.290.000032
N40R40CCgtTgt22AY.300.000791
N40R40CCgtTgt22AY.4.20.000043
N40R40CCgtTgt22AY.4.50.000215
N40R40CCgtTgt22AY.570.001312
N40R40CCgtTgt22AY.590.001059
N40R40CCgtTgt22AY.910.001461
N40R40CCgtTgt22AY.920.000575
N40R40CCgtTgt22B.1.1.2610.017241
N40R40CCgtTgt22B.1.1.280.000622
N40R40CCgtTgt22B.1.1.3370.007194
N40R40CCgtTgt22B.1.1.390.001019
N40R40CCgtTgt22B.1.1.4490.045455
N40R40CCgtTgt22B.1.2210.000142
N40R40CCgtTgt22B.1.2430.000139
N40R40CCgtTgt22B.1.3060.011429
N40R40CCgtTgt22B.1.3440.016393
N40R40CCgtTgt22B.1.360.000292
N40R40CCgtTgt22B.1.3690.00057
N40R40CCgtTgt22B.1.5950.000522
N40R40CCgtTgt22B.1.5960.000174
N40R40CCgtTgt22P.1.150.000465
N40R40CCgtTgt22Q.10.000253
N40R40CCgtTgt11A.50.001923
N40R40CCgtTgt11AD.20.000219
N40R40CCgtTgt11AE.80.000489
N40R40CCgtTgt11AM.40.003571
N40R40CCgtTgt11AU.30.00211
N40R40CCgtTgt11AY.1000.000046
N40R40CCgtTgt11AY.1050.000643
N40R40CCgtTgt11AY.1090.00074
N40R40CCgtTgt11AY.1140.000231
N40R40CCgtTgt11AY.1160.000287
N40R40CCgtTgt11AY.116.10.000311
N40R40CCgtTgt11AY.120.000316
N40R40CCgtTgt11AY.16.10.00047
N40R40CCgtTgt11AY.20.000356
N40R40CCgtTgt11AY.230.00007
N40R40CCgtTgt11AY.240.000431
N40R40CCgtTgt11AY.270.000065
N40R40CCgtTgt11AY.320.000532
N40R40CCgtTgt11AY.360.000148
N40R40CCgtTgt11AY.39.10.00004
N40R40CCgtTgt11AY.4.40.000409
N40R40CCgtTgt11AY.420.00004
N40R40CCgtTgt11AY.450.000122
N40R40CCgtTgt11AY.46.10.001027
N40R40CCgtTgt11AY.5.40.000277
N40R40CCgtTgt11AY.770.001127
N40R40CCgtTgt11AY.790.001211
N40R40CCgtTgt11AY.820.001357
N40R40CCgtTgt11AY.840.000437
N40R40CCgtTgt11AY.99.20.000092
N40R40CCgtTgt11B.1.1.1210.002427
N40R40CCgtTgt11B.1.1.1760.000439
N40R40CCgtTgt11B.1.1.2140.000055
N40R40CCgtTgt11B.1.1.2310.003096
N40R40CCgtTgt11B.1.1.2400.004695
N40R40CCgtTgt11B.1.1.2630.001558
N40R40CCgtTgt11B.1.1.2750.011236
N40R40CCgtTgt11B.1.1.3070.002532
N40R40CCgtTgt11B.1.1.3150.008475
N40R40CCgtTgt11B.1.1.3170.000412
N40R40CCgtTgt11B.1.1.3180.000302
N40R40CCgtTgt11B.1.1.330.000421
N40R40CCgtTgt11B.1.1.370.000193
N40R40CCgtTgt11B.1.1.4090.002833
N40R40CCgtTgt11B.1.1.4340.000349
N40R40CCgtTgt11B.1.1.5180.006329
N40R40CCgtTgt11B.1.1.710.006061
N40R40CCgtTgt11B.1.160.230.004831
N40R40CCgtTgt11B.1.160.240.004425
N40R40CCgtTgt11B.1.177.320.00135
N40R40CCgtTgt11B.1.177.820.000477
N40R40CCgtTgt11B.1.2400.000216
N40R40CCgtTgt11B.1.2680.010417
N40R40CCgtTgt11B.1.3460.001311
N40R40CCgtTgt11B.1.3510.00003
N40R40CCgtTgt11B.1.36.360.000602
N40R40CCgtTgt11B.1.36.380.001642
N40R40CCgtTgt11B.1.3610.001289
N40R40CCgtTgt11B.1.3960.000706
N40R40CCgtTgt11B.1.4110.003704
N40R40CCgtTgt11B.1.4380.006536
N40R40CCgtTgt11B.1.4520.013699
N40R40CCgtTgt11B.1.4680.005714
N40R40CCgtTgt11B.1.4970.000315
N40R40CCgtTgt11B.1.5250.000113
N40R40CCgtTgt11B.1.5460.003704
N40R40CCgtTgt11B.1.575.10.002439
N40R40CCgtTgt11B.1.6280.000352
N40R40CCgtTgt11B.1.6370.000073
N40R40CCgtTgt11B.430.014286
N40R40CCgtTgt11C.360.000911
N40R40CCgtTgt11C.36.10.004149
N40R40CCgtTgt11D.20.000075
N40R40CCgtTgt11P.1.170.000162
N40R40CCgtTgt11Q.40.000455
N40R40CCgtTgt11Q.80.000165