CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = R10L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N10R10LnonsyncGacTa1811800.99447528301-28303
N10R10LnonsyncGAcTG18110.0055248628301-28303

Details of the mutation R10L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N10R10LcGacTa180181All0.000034
N10R10LcGAcTG1181All0
N10R10LcGacTa4949B.1.1.70.000044
N10R10LcGacTa4444AY.40.000068
N10R10LcGacTa99B.1.617.20.000034
N10R10LcGacTa66B.10.000055
N10R10LcGacTa55AY.1030.000031
N10R10LcGacTa55B.1.4290.000118
N10R10LcGacTa44AY.440.000024
N10R10LcGacTa33AY.250.000018
N10R10LcGacTa33AY.420.000121
N10R10LcGacTa33AY.430.000013
N10R10LcGacTa33B.1.20.000026
N10R10LcGacTa22A0.000774
N10R10LcGacTa22B.1.1.4650.03125
N10R10LcGacTa22B.1.1600.000062
N10R10LcGacTa22B.1.177.810.000379
N10R10LcGacTa22B.1.5960.000174
N10R10LcGacTa22B.1.6370.000146
N10R10LcGacTa22C.360.001821
N10R10LcGacTa11AY.1020.000027
N10R10LcGAcTG11AY.120.10.000321
N10R10LcGacTa11AY.140.000088
N10R10LcGacTa11AY.30.00001
N10R10LcGacTa11AY.390.000025
N10R10LcGacTa11AY.4.10.000737
N10R10LcGacTa11AY.450.000122
N10R10LcGacTa11AY.46.60.000072
N10R10LcGacTa11AY.470.000031
N10R10LcGacTa11AY.50.000021
N10R10LcGacTa11AY.5.40.000277
N10R10LcGacTa11AY.98.10.000048
N10R10LcGacTa11AZ.20.000821
N10R10LcGacTa11B.1.1.2510.007937
N10R10LcGacTa11B.1.1.2750.011236
N10R10LcGacTa11B.1.1.2940.001266
N10R10LcGacTa11B.1.1.3020.002075
N10R10LcGacTa11B.1.1.330.000421
N10R10LcGacTa11B.1.1770.000013
N10R10LcGacTa11B.1.177.210.000076
N10R10LcGacTa11B.1.177.520.001757
N10R10LcGacTa11B.1.220.001318
N10R10LcGacTa11B.1.2340.000132
N10R10LcGacTa11B.1.2430.00007
N10R10LcGacTa11B.1.2580.000067
N10R10LcGacTa11B.1.258.170.000104
N10R10LcGacTa11B.1.3110.000275
N10R10LcGacTa11B.1.3670.000792
N10R10LcGacTa11B.1.5260.000024
N10R10LcGacTa11B.1.5950.000261
N10R10LcGacTa11B.1.930.000934
N10R10LcGacTa11P.1.170.000162
N10R10LcGacTa11Q.30.000145