CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = Q9L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N9Q9LnonsyncAgcTg1563111561990.99928328298-28300
N9Q9LnonsyncAGcTT156311700.00044782528298-28300
N9Q9LnonsynCAgTTg156311340.00021751528298-28300
N9Q9LnonsyncAGcTC15631170.000044782528298-28300
N9Q9LnonsyncAGcTA15631110.000006397528298-28300

Details of the mutation Q9L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N9Q9LcAgcTg156199156311All0.029875
N9Q9LcAGcTT70156311All0.000013
N9Q9LCAgTTg34156311All0.000007
N9Q9LcAGcTC7156311All0.000001
N9Q9LcAGcTA1156311All0
N9Q9LcAgcTg155581155693AY.430.689296
N9Q9LcAGcTT70155693AY.430.00031
N9Q9LCAgTTg34155693AY.430.000151
N9Q9LcAGcTC7155693AY.430.000031
N9Q9LcAGcTA1155693AY.430.000004
N9Q9LcAgcTg151151B.1.617.20.000569
N9Q9LcAgcTg9292AY.420.003701
N9Q9LcAgcTg8080B.1.1.70.000072
N9Q9LcAgcTg5858AY.440.000353
N9Q9LcAgcTg3131AY.1080.034179
N9Q9LcAgcTg1919AY.1030.000118
N9Q9LcAgcTg1818AY.1200.000669
N9Q9LcAgcTg1616AY.40.000025
N9Q9LcAgcTg1414AY.390.000346
N9Q9LcAgcTg1111AY.340.001067
N9Q9LcAgcTg1111AY.9.20.000404
N9Q9LcAgcTg99B.10.000082
N9Q9LcAgcTg88AY.120.2.10.003986
N9Q9LcAgcTg88AY.98.10.000387
N9Q9LcAgcTg77AY.5.40.001937
N9Q9LcAgcTg66AY.460.000624
N9Q9LcAgcTg55AY.680.001369
N9Q9LcAgcTg44AY.1020.000106
N9Q9LcAgcTg44AY.980.000316
N9Q9LcAgcTg44P.10.000063
N9Q9LcAgcTg33AY.1160.00086
N9Q9LcAgcTg33AY.230.000209
N9Q9LcAgcTg33AY.330.0002
N9Q9LcAgcTg33AY.34.10.00153
N9Q9LcAgcTg33AY.450.000365
N9Q9LcAgcTg33AY.540.000286
N9Q9LcAgcTg33AY.930.000819
N9Q9LcAgcTg33B.400.001093
N9Q9LcAgcTg22AY.100.00106
N9Q9LcAgcTg22AY.1110.000366
N9Q9LcAgcTg22AY.1190.000071
N9Q9LcAgcTg22AY.360.000296
N9Q9LcAgcTg22AY.50.000041
N9Q9LcAgcTg22AY.90.000135
N9Q9LcAgcTg22AY.920.000575
N9Q9LcAgcTg22B.1.351.50.001199
N9Q9LcAgcTg110.055556
N9Q9LcAgcTg11AY.1100.000113
N9Q9LcAgcTg11AY.1170.000085
N9Q9LcAgcTg11AY.120.000316
N9Q9LcAgcTg11AY.4.20.000022
N9Q9LcAgcTg11AY.4.30.000842
N9Q9LcAgcTg11AY.46.60.000072
N9Q9LcAgcTg11AY.530.000288
N9Q9LcAgcTg11AY.7.10.000113
N9Q9LcAgcTg11AY.75.10.00018
N9Q9LcAgcTg11AY.9.10.000084
N9Q9LcAgcTg11B0.000128
N9Q9LcAgcTg11B.1.10.000018
N9Q9LcAgcTg11B.1.1.5190.00004
N9Q9LcAgcTg11B.1.3510.00003
N9Q9LcAgcTg11B.1.360.000146
N9Q9LcAgcTg11B.1.3750.00082
N9Q9LcAgcTg11B.1.5260.000024
N9Q9LcAgcTg11B.1.5960.000087
N9Q9LcAgcTg11B.1.6210.000089
N9Q9LcAgcTg11B.1.6270.00202
N9Q9LcAgcTg11P.1.120.000484