CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P80R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N80P80RnonsyncCacGa1147851147720.99988728511-28513
N80P80RnonsyncCAcGC114785100.000087119428511-28513
N80P80RnonsyncCAcGG11478530.000026135828511-28513

Details of the mutation P80R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N80P80RcCacGa114772114785All0.021952
N80P80RcCAcGC10114785All0.000002
N80P80RcCAcGG3114785All0.000001
N80P80RcCacGa6280262815P.10.989382
N80P80RcCAcGC1062815P.10.000158
N80P80RcCAcGG362815P.10.000047
N80P80RcCacGa2088020880P.1.140.998088
N80P80RcCacGa61546154P.1.170.995471
N80P80RcCacGa42704270P.1.150.9921
N80P80RcCacGa36833683P.1.100.992455
N80P80RcCacGa31023102P.1.70.990421
N80P80RcCacGa30483048P.1.10.968234
N80P80RcCacGa26112611P.1.160.976805
N80P80RcCacGa19181918P.1.120.928364
N80P80RcCacGa11381138P.1.17.10.995626
N80P80RcCacGa11051105P.1.130.992812
N80P80RcCacGa10231023P.1.40.999023
N80P80RcCacGa863863P.1.20.997688
N80P80RcCacGa510510P.1.60.992218
N80P80RcCacGa209209P.1.81
N80P80RcCacGa207207P.1.90.995192
N80P80RcCacGa189189B.1.6300.989529
N80P80RcCacGa185185B.10.001695
N80P80RcCacGa163163B.1.10.002957
N80P80RcCacGa112112P.1.10.10.910569
N80P80RcCacGa9898P.1.111
N80P80RcCacGa4747B.1.177.350.032481
N80P80RcCacGa3737B.1.1.5280.177885
N80P80RcCacGa2929P.1.31
N80P80RcCacGa2727C.370.003134
N80P80RcCacGa2525C.1.20.106383
N80P80RcCacGa2424B.1.1.280.00747
N80P80RcCacGa2424P.1.10.21
N80P80RcCacGa1717B.1.1600.00053
N80P80RcCacGa1515B.1.1770.000198
N80P80RcCacGa1313B.1.1.70.000012
N80P80RcCacGa1313P.1.51
N80P80RcCacGa1212B.1.1.5190.000477
N80P80RcCacGa1111AY.1030.000068
N80P80RcCacGa1111B.1.4290.000259
N80P80RcCacGa99B.1.214.20.005396
N80P80RcCacGa99B.1.3490.006433
N80P80RcCacGa88A.2.50.003992
N80P80RcCacGa66AY.30.00006
N80P80RcCacGa66AY.430.000027
N80P80RcCacGa66B.1.3510.000178
N80P80RcCacGa66B.1.3980.017857
N80P80RcCacGa66B.1.617.20.000023
N80P80RcCacGa55AY.440.00003
N80P80RcCacGa55B.1.5960.000436
N80P80RcCacGa44B0.000511
N80P80RcCacGa44B.1.1.5230.00625
N80P80RcCacGa44B.1.5260.000094
N80P80RcCacGa44B.1.6210.000354
N80P80RcCacGa44C.37.10.010471
N80P80RcCacGa33B.1.1.1610.010601
N80P80RcCacGa33B.1.1.2200.005576
N80P80RcCacGa33B.1.1.3720.002066
N80P80RcCacGa33B.1.1.5070.026087
N80P80RcCacGa33B.1.2210.000213
N80P80RcCacGa33B.1.2340.000396
N80P80RcCacGa33C.36.3.10.008152
N80P80RcCacGa33P.20.00056
N80P80RcCacGa22AY.1010.000981
N80P80RcCacGa22AY.1020.000053
N80P80RcCacGa22AY.200.000078
N80P80RcCacGa22AY.230.000139
N80P80RcCacGa22AY.630.000774
N80P80RcCacGa22AY.9.20.000073
N80P80RcCacGa22AZ.10.001735
N80P80RcCacGa22B.1.1.1170.019417
N80P80RcCacGa22B.1.1.3480.001592
N80P80RcCacGa22B.1.1.4090.005666
N80P80RcCacGa22B.1.177.70.00033
N80P80RcCacGa22B.1.177.730.001133
N80P80RcCacGa22B.1.20.000018
N80P80RcCacGa22B.1.2410.001623
N80P80RcCacGa22B.1.3110.000549
N80P80RcCacGa22B.1.3240.00321
N80P80RcCacGa22B.1.3690.00057
N80P80RcCacGa22B.1.5240.002813
N80P80RcCacGa22B.1.5330.019231
N80P80RcCacGa22B.1.6230.001073
N80P80RcCacGa11AY.1080.001103
N80P80RcCacGa11AY.120.20.001285
N80P80RcCacGa11AY.130.000161
N80P80RcCacGa11AY.16.10.00047
N80P80RcCacGa11AY.20.000356
N80P80RcCacGa11AY.250.000006
N80P80RcCacGa11AY.350.000233
N80P80RcCacGa11AY.390.000025
N80P80RcCacGa11AY.39.10.00004
N80P80RcCacGa11AY.40.000002
N80P80RcCacGa11AY.4.50.000107
N80P80RcCacGa11AY.470.000031
N80P80RcCacGa11AY.50.000021
N80P80RcCacGa11AY.610.000105
N80P80RcCacGa11AY.620.000436
N80P80RcCacGa11AY.75.10.00018
N80P80RcCacGa11AY.99.20.000092
N80P80RcCacGa11B.1.1.1210.002427
N80P80RcCacGa11B.1.1.1980.001468
N80P80RcCacGa11B.1.1.2360.006897
N80P80RcCacGa11B.1.1.2650.003155
N80P80RcCacGa11B.1.1.2940.001266
N80P80RcCacGa11B.1.1.3060.000438
N80P80RcCacGa11B.1.1.330.000421
N80P80RcCacGa11B.1.1.540.003021
N80P80RcCacGa11B.1.1.990.02381
N80P80RcCacGa11B.1.1110.001175
N80P80RcCacGa11B.1.1700.00431
N80P80RcCacGa11B.1.177.420.000894
N80P80RcCacGa11B.1.1790.003759
N80P80RcCacGa11B.1.2140.003663
N80P80RcCacGa11B.1.2360.002053
N80P80RcCacGa11B.1.360.000146
N80P80RcCacGa11B.1.3670.000792
N80P80RcCacGa11B.1.4150.014286
N80P80RcCacGa11B.1.4970.000315
N80P80RcCacGa11B.1.5750.000303
N80P80RcCacGa11B.1.6090.000479
N80P80RcCacGa11B.1.6200.000946
N80P80RcCacGa11B.1.6360.006711
N80P80RcCacGa11B.1.6370.000073
N80P80RcCacGa11C.130.025641
N80P80RcCacGa11D.20.000075
N80P80RcCacGa11P.40.003802
N80P80RcCacGa11P.70.004367
N80P80RcCacGa11Q.10.000126
N80P80RcCacGa11Q.80.000165