CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P6P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N6P6PsynccCccT13407129920.96904628289-28291
N6P6PsynccCccA134074100.03058128289-28291
N6P6PsynccCccG1340750.0003729428289-28291

Details of the mutation P6P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N6P6PccCccT1299213407All0.002485
N6P6PccCccA41013407All0.000078
N6P6PccCccG513407All0.000001
N6P6PccCccT63266378AY.40.009846
N6P6PccCccA526378AY.40.000081
N6P6PccCccT14901491B.1.2320.800645
N6P6PccCccG11491B.1.2320.000537
N6P6PccCccT880889B.1.1.70.000788
N6P6PccCccA9889B.1.1.70.000008
N6P6PccCccT532532AY.340.051585
N6P6PccCccT225446AY.440.00137
N6P6PccCccA221446AY.440.001345
N6P6PccCccT314330B.1.617.20.001182
N6P6PccCccA16330B.1.617.20.00006
N6P6PccCccT313320B.1.20.002756
N6P6PccCccA7320B.1.20.000062
N6P6PccCccT235235B.1.5960.020478
N6P6PccCccT204204B.1.5260.004795
N6P6PccCccT163173AY.430.000722
N6P6PccCccA10173AY.430.000044
N6P6PccCccT161161AY.250.000968
N6P6PccCccT136145P.10.002143
N6P6PccCccA9145P.10.000142
N6P6PccCccT129136AY.1030.000801
N6P6PccCccA7136AY.1030.000043
N6P6PccCccT136136B.1.1.4130.937931
N6P6PccCccT113122B.10.001035
N6P6PccCccA9122B.10.000082
N6P6PccCccT8181B.1.10.001469
N6P6PccCccT7477AY.390.001829
N6P6PccCccA377AY.390.000074
N6P6PccCccT7373P.20.013624
N6P6PccCccT5959AY.290.000931
N6P6PccCccT5758AY.50.001177
N6P6PccCccA158AY.50.000021
N6P6PccCccT3948AY.30.000388
N6P6PccCccA948AY.30.00009
N6P6PccCccT4646B.1.2340.006069
N6P6PccCccT4042B.1.1770.000527
N6P6PccCccA242B.1.1770.000026
N6P6PccCccT4041B.1.3510.001189
N6P6PccCccA141B.1.3510.00003
N6P6PccCccT3838B.1.1.3530.791667
N6P6PccCccT3838B.1.2430.002644
N6P6PccCccT3535B.1.1.370.00675
N6P6PccCccT3232AY.420.001287
N6P6PccCccT2930B.1.1600.000904
N6P6PccCccA130B.1.1600.000031
N6P6PccCccT2929AY.1210.003924
N6P6PccCccA1729B.1.4290.0004
N6P6PccCccT1229B.1.4290.000282
N6P6PccCccT2627AY.1020.000689
N6P6PccCccA127AY.1020.000027
N6P6PccCccT2727AY.230.001883
N6P6PccCccT2727AY.790.032688
N6P6PccCccT2626B.1.1.4320.032911
N6P6PccCccT2424P.1.140.001147
N6P6PccCccT2323AY.610.00241
N6P6PccCccT1919AY.1000.000874
N6P6PccCccT1819AY.330.001202
N6P6PccCccA119AY.330.000067
N6P6PccCccT1919AY.60.000781
N6P6PccCccA1617B.1.1.2220.003264
N6P6PccCccT117B.1.1.2220.000204
N6P6PccCccT1717B.1.1.3180.00513
N6P6PccCccT1717B.1.1460.072034
N6P6PccCccT1616AY.1190.000565
N6P6PccCccT1616B.1.1.1760.00703
N6P6PccCccT1616B.1.36.380.026273
N6P6PccCccT1616C.36.30.009075
N6P6PccCccT1616P.1.160.005986
N6P6PccCccT1415AY.260.000396
N6P6PccCccA115AY.260.000028
N6P6PccCccT1515AY.620.006536
N6P6PccCccT1014AY.4.20.000217
N6P6PccCccG414AY.4.20.000087
N6P6PccCccT1414AY.9.10.001172
N6P6PccCccT1414B.1.438.10.001502
N6P6PccCccT1313A.2.50.006487
N6P6PccCccT1313B.1.1.3010.01533
N6P6PccCccT1313B.1.1.3060.005699
N6P6PccCccT1213B.1.177.820.005728
N6P6PccCccA113B.1.177.820.000477
N6P6PccCccT1313P.1.150.00302
N6P6PccCccT1212AY.1130.001709
N6P6PccCccT1212AY.9.20.000441
N6P6PccCccT1112B.1.258.170.001144
N6P6PccCccA112B.1.258.170.000104
N6P6PccCccT1212Q.40.005457
N6P6PccCccT1111AY.590.005826
N6P6PccCccT911AY.750.000504
N6P6PccCccA211AY.750.000112
N6P6PccCccT1011B.1.1.5190.000397
N6P6PccCccA111B.1.1.5190.00004
N6P6PccCccT1111B.1.3360.026829
N6P6PccCccT1010AY.140.00088
N6P6PccCccT910AY.460.000937
N6P6PccCccA110AY.460.000104
N6P6PccCccT910B.1.2580.000599
N6P6PccCccA110B.1.2580.000067
N6P6PccCccT99B.1.6210.000797
N6P6PccCccT88AY.700.001668
N6P6PccCccT88B.1.1.3160.007401
N6P6PccCccT77AY.120.10.002247
N6P6PccCccT47AY.200.000155
N6P6PccCccA37AY.200.000117
N6P6PccCccT77AY.4.50.000752
N6P6PccCccT77AY.46.40.001152
N6P6PccCccT77AY.880.006189
N6P6PccCccT66A.210.01662
N6P6PccCccT66AY.1200.000223
N6P6PccCccT66AY.39.10.000238
N6P6PccCccT66AY.4.40.002455
N6P6PccCccT56AY.470.000156
N6P6PccCccA16AY.470.000031
N6P6PccCccT66D.20.00045
N6P6PccCccT55AY.1100.000563
N6P6PccCccT55AY.410.00147
N6P6PccCccT55B.1.1.2860.014493
N6P6PccCccT55B.1.360.00073
N6P6PccCccT55B.1.3980.014881
N6P6PccCccT55B.1.4040.00651
N6P6PccCccT45B.1.4270.000202
N6P6PccCccA15B.1.4270.00005
N6P6PccCccT55B.1.4660.116279
N6P6PccCccT55Q.80.000825
N6P6PccCccT55R.10.00045
N6P6PccCccT44AY.1170.000338
N6P6PccCccT44AY.120.2.10.001993
N6P6PccCccT34AY.270.000194
N6P6PccCccA14AY.270.000065
N6P6PccCccT44AY.3.10.000341
N6P6PccCccT44AY.450.000487
N6P6PccCccT44AY.5.40.001107
N6P6PccCccT44AY.920.001149
N6P6PccCccT44AY.930.001092
N6P6PccCccT44B.1.1.2140.000222
N6P6PccCccT44B.1.4000.001716
N6P6PccCccT44B.1.6370.000292
N6P6PccCccT33A.20.001985
N6P6PccCccT23AY.1050.001286
N6P6PccCccA13AY.1050.000643
N6P6PccCccT33AY.1060.001005
N6P6PccCccT33AY.16.10.00141
N6P6PccCccT33AY.690.00056
N6P6PccCccT33AY.840.001312
N6P6PccCccT33AY.90.000203
N6P6PccCccT33B.1.1.280.000934
N6P6PccCccT33B.1.2210.000213
N6P6PccCccT33B.1.4200.03125
N6P6PccCccT22AY.1160.000574
N6P6PccCccT22AY.46.20.001271
N6P6PccCccT22AY.540.000191
N6P6PccCccT22AY.630.000774
N6P6PccCccT22AY.75.10.000361
N6P6PccCccT22AY.870.001665
N6P6PccCccT22AY.970.003401
N6P6PccCccT22AY.98.10.000097
N6P6PccCccT22B0.000256
N6P6PccCccT22B.1.1.2160.001781
N6P6PccCccT22B.1.1.3480.001592
N6P6PccCccT22B.1.1.3720.001377
N6P6PccCccT22B.1.1.500.001358
N6P6PccCccT22B.1.1700.008621
N6P6PccCccT22B.1.177.810.000379
N6P6PccCccT22B.1.214.20.001199
N6P6PccCccT22B.1.2400.000431
N6P6PccCccT22B.1.36.290.001035
N6P6PccCccA22B.1.4320.022472
N6P6PccCccT22B.1.466.20.000782
N6P6PccCccT22B.1.5180.023529
N6P6PccCccT22B.1.5240.002813
N6P6PccCccT22B.1.564.10.003155
N6P6PccCccT22Q.30.00029
N6P6PccCccT11A.23.10.000704
N6P6PccCccT11AY.1040.001984
N6P6PccCccT11AY.1090.00074
N6P6PccCccT11AY.1110.000183
N6P6PccCccT11AY.1140.000231
N6P6PccCccT11AY.130.000161
N6P6PccCccT11AY.190.00114
N6P6PccCccT11AY.29.10.000221
N6P6PccCccT11AY.300.000396
N6P6PccCccT11AY.320.000532
N6P6PccCccT11AY.34.10.00051
N6P6PccCccA11AY.39.1.10.000725
N6P6PccCccT11AY.39.20.001541
N6P6PccCccT11AY.4.30.000842
N6P6PccCccT11AY.46.10.001027
N6P6PccCccT11AY.530.000288
N6P6PccCccT11AY.550.000917
N6P6PccCccT11AY.680.000274
N6P6PccCccT11AY.710.000475
N6P6PccCccT11AY.720.001361
N6P6PccCccT11AY.740.000116
N6P6PccCccT11AY.80.000606
N6P6PccCccT11AY.980.000079
N6P6PccCccT11AY.99.20.000092
N6P6PccCccT11AZ.10.000867
N6P6PccCccT11AZ.20.000821
N6P6PccCccT11B.1.1.160.055556
N6P6PccCccT11B.1.1.1740.003378
N6P6PccCccT11B.1.1.2440.015385
N6P6PccCccT11B.1.1.3260.001761
N6P6PccCccT11B.1.1.330.000421
N6P6PccCccT11B.1.1.390.00051
N6P6PccCccT11B.1.1.4090.002833
N6P6PccCccT11B.1.1.4170.002703
N6P6PccCccT11B.1.1.4340.000349
N6P6PccCccT11B.1.1.4660.008696
N6P6PccCccT11B.1.1.990.02381
N6P6PccCccT11B.1.110.30.000718
N6P6PccCccT11B.1.1570.002985
N6P6PccCccT11B.1.177.540.000606
N6P6PccCccT11B.1.177.550.002331
N6P6PccCccT11B.1.177.600.000218
N6P6PccCccT11B.1.177.630.002703
N6P6PccCccT11B.1.177.70.000165
N6P6PccCccT11B.1.177.770.000726
N6P6PccCccT11B.1.2140.003663
N6P6PccCccT11B.1.2370.004975
N6P6PccCccT11B.1.2410.000812
N6P6PccCccT11B.1.2600.003344
N6P6PccCccT11B.1.2650.001271
N6P6PccCccT11B.1.2840.013158
N6P6PccCccT11B.1.3110.000275
N6P6PccCccT11B.1.3490.000715
N6P6PccCccT11B.1.36.100.004785
N6P6PccCccT11B.1.36.180.00042
N6P6PccCccT11B.1.36.220.001208
N6P6PccCccT11B.1.36.70.004
N6P6PccCccT11B.1.36.80.001
N6P6PccCccT11B.1.3610.001289
N6P6PccCccT11B.1.3620.001541
N6P6PccCccT11B.1.3690.000285
N6P6PccCccT11B.1.4170.028571
N6P6PccCccT11B.1.4220.000812
N6P6PccCccT11B.1.4280.00102
N6P6PccCccT11B.1.4380.006536
N6P6PccCccT11B.1.4430.004673
N6P6PccCccT11B.1.4600.017857
N6P6PccCccT11B.1.5380.008065
N6P6PccCccT11B.1.5640.000426
N6P6PccCccT11B.1.5950.000261
N6P6PccCccT11B.1.6050.005952
N6P6PccCccT11B.1.6070.052632
N6P6PccCccT11B.1.617.10.000129
N6P6PccCccT11B.1.6200.000946
N6P6PccCccT11B.1.621.10.000506
N6P6PccCccT11B.1.6230.000536
N6P6PccCccT11B.1.6260.005714
N6P6PccCccT11B.1.930.000934
N6P6PccCccT11C.110.010638
N6P6PccCccT11N.40.004255
N6P6PccCccT11P.1.120.000484
N6P6PccCccT11P.1.170.000162
N6P6PccCccT11P.1.70.000319
N6P6PccCccT11Q.10.000126