CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P46S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N46P46SnonsynCccTcc351535130.99943128409-28411
N46P46SnonsynCcCTcT351510.00028449528409-28411
N46P46SnonsynCCcAGc351510.00028449528409-28411

Details of the mutation P46S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N46P46SCccTcc35133515All0.000672
N46P46SCCcAGc13515All0
N46P46SCcCTcT13515All0
N46P46SCccTcc832832AY.730.55356
N46P46SCccTcc500500B.1.1.70.000448
N46P46SCccTcc297297AY.40.000462
N46P46SCccTcc166166B.1.617.20.000625
N46P46SCccTcc163163AY.30.001621
N46P46SCccTcc158158AY.1030.000981
N46P46SCccTcc112112AY.1200.004164
N46P46SCccTcc106106AY.440.000645
N46P46SCccTcc103103AY.430.000456
N46P46SCccTcc8383AY.250.000499
N46P46SCccTcc8181AY.4.20.001757
N46P46SCccTcc5656B.1.20.000493
N46P46SCccTcc5656B.1.2340.007389
N46P46SCccTcc4949B.10.000449
N46P46SCccTcc3333AY.39.20.050847
N46P46SCccTcc3131B.1.1770.000408
N46P46SCccTcc2828B.1.4290.000659
N46P46SCccTcc2727AY.470.00084
N46P46SCccTcc2323B.1.6230.012339
N46P46SCccTcc1616B.1.177.750.016649
N46P46SCccTcc1515AY.230.001046
N46P46SCccTcc1515AY.290.000237
N46P46SCccTcc1313AY.1020.000345
N46P46SCccTcc1313AY.390.000321
N46P46SCccTcc1313B.1.1.2220.002652
N46P46SCccTcc1313B.1.4270.000656
N46P46SCccTcc1313B.1.617.10.001677
N46P46SCccTcc1313B.1.6370.00095
N46P46SCccTcc1313C.370.001509
N46P46SCccTcc1313P.10.000205
N46P46SCccTcc1212AY.46.60.000866
N46P46SCccTcc1111AY.200.000428
N46P46SCccTcc1111AY.340.001067
N46P46SCccTcc1111B.1.1460.04661
N46P46SCccTcc1111B.1.177.820.005251
N46P46SCccTcc1010AY.1190.000353
N46P46SCccTcc1010AY.3.10.000853
N46P46SCccTcc1010B.1.1.4340.003486
N46P46SCccTcc1010B.1.177.810.001893
N46P46SCccTcc1010B.1.3460.013106
N46P46SCccTcc99AY.1000.000414
N46P46SCccTcc99AY.50.000186
N46P46SCccTcc99B.1.1.3160.008326
N46P46SCccTcc88AY.1170.000676
N46P46SCccTcc88AY.260.000226
N46P46SCccTcc88AY.780.012327
N46P46SCccTcc77B.1.10.000127
N46P46SCccTcc77B.1.1.5190.000278
N46P46SCccTcc77B.1.1600.000218
N46P46SCccTcc77B.1.177.170.005747
N46P46SCccTcc77B.1.5260.000165
N46P46SCccTcc77Q.70.007778
N46P46SCccTcc66B.1.3510.000178
N46P46SCccTcc66D.20.00045
N46P46SCccTcc55AY.120.10.001605
N46P46SCccTcc55AY.60.000206
N46P46SCccTcc55AY.740.000578
N46P46SCccTcc55AY.98.10.000242
N46P46SCccTcc55B.1.1.460.021834
N46P46SCccTcc45B.1.2210.000284
N46P46SCCcAGc15B.1.2210.000071
N46P46SCccTcc55B.1.2430.000348
N46P46SCccTcc55P.1.140.000239
N46P46SCccTcc55P.1.150.001162
N46P46SCccTcc44AY.16.10.00188
N46P46SCccTcc44AY.450.000487
N46P46SCccTcc44AY.99.20.000369
N46P46SCccTcc44B0.000511
N46P46SCccTcc44B.1.2360.008214
N46P46SCccTcc44B.1.2580.000266
N46P46SCccTcc44B.1.3110.001098
N46P46SCccTcc44B.1.5610.001588
N46P46SCccTcc44Q.30.00058
N46P46SCccTcc33AY.116.10.000934
N46P46SCccTcc33AY.330.0002
N46P46SCccTcc33AY.400.002893
N46P46SCccTcc33AY.420.000121
N46P46SCccTcc33AY.700.000626
N46P46SCccTcc33AY.710.001425
N46P46SCccTcc33AY.750.000168
N46P46SCccTcc33AY.75.10.000541
N46P46SCccTcc33B.1.1.3060.001315
N46P46SCccTcc33B.1.177.460.002755
N46P46SCccTcc33B.1.3690.000856
N46P46SCccTcc33B.1.438.10.000322
N46P46SCccTcc33B.1.5510.003871
N46P46SCccTcc33P.1.170.000485
N46P46SCccTcc22AY.1210.000271
N46P46SCccTcc22AY.190.002281
N46P46SCccTcc22AY.4.2.10.000298
N46P46SCccTcc22AY.4.40.000818
N46P46SCccTcc22AY.4.50.000215
N46P46SCccTcc22AY.620.000871
N46P46SCccTcc22AY.650.001066
N46P46SCccTcc22AY.980.000158
N46P46SCccTcc22AZ.20.001642
N46P46SCccTcc22B.1.1.10.000653
N46P46SCccTcc22B.1.1.2840.000215
N46P46SCccTcc22B.1.1.3110.000716
N46P46SCccTcc22B.1.177.150.001262
N46P46SCccTcc22B.1.177.200.003035
N46P46SCccTcc22B.1.177.350.001382
N46P46SCccTcc22B.1.177.570.000562
N46P46SCccTcc22B.1.177.600.000437
N46P46SCccTcc22B.1.2870.060606
N46P46SCcCTcT12B.1.360.000146
N46P46SCccTcc12B.1.360.000146
N46P46SCccTcc22B.1.4060.012121
N46P46SCccTcc22B.1.428.30.025641
N46P46SCccTcc22B.1.4380.013072
N46P46SCccTcc22B.1.4700.002809
N46P46SCccTcc22B.1.5880.00182
N46P46SCccTcc22B.1.5990.007299
N46P46SCccTcc22B.1.6210.000177
N46P46SCccTcc11A0.000387
N46P46SCccTcc11AP.10.001502
N46P46SCccTcc11AY.10.000396
N46P46SCccTcc11AY.1100.000113
N46P46SCccTcc11AY.1140.000231
N46P46SCccTcc11AY.1180.000063
N46P46SCccTcc11AY.140.000088
N46P46SCccTcc11AY.23.10.000417
N46P46SCccTcc11AY.270.000065
N46P46SCccTcc11AY.280.00189
N46P46SCccTcc11AY.360.000148
N46P46SCccTcc11AY.39.10.00004
N46P46SCccTcc11AY.4.30.000842
N46P46SCccTcc11AY.410.000294
N46P46SCccTcc11AY.460.000104
N46P46SCccTcc11AY.46.40.000165
N46P46SCccTcc11AY.610.000105
N46P46SCccTcc11AY.680.000274
N46P46SCccTcc11AY.690.000187
N46P46SCccTcc11AY.7.20.000559
N46P46SCccTcc11AY.790.001211
N46P46SCccTcc11AY.840.000437
N46P46SCccTcc11AY.850.000427
N46P46SCccTcc11AY.90.000068
N46P46SCccTcc11AY.9.10.000084
N46P46SCccTcc11AY.9.20.000037
N46P46SCccTcc11AY.920.000287
N46P46SCccTcc11AY.930.000273
N46P46SCccTcc11B.1.1.1960.005714
N46P46SCccTcc11B.1.1.1980.001468
N46P46SCccTcc11B.1.1.2160.00089
N46P46SCccTcc11B.1.1.2310.003096
N46P46SCccTcc11B.1.1.270.00565
N46P46SCccTcc11B.1.1.280.000311
N46P46SCccTcc11B.1.1.2910.000742
N46P46SCccTcc11B.1.1.3180.000302
N46P46SCccTcc11B.1.1.370.000193
N46P46SCccTcc11B.1.1.3780.007299
N46P46SCccTcc11B.1.1.390.00051
N46P46SCccTcc11B.1.1.5230.001563
N46P46SCccTcc11B.1.1040.00369
N46P46SCccTcc11B.1.177.120.000152
N46P46SCccTcc11B.1.177.210.000076
N46P46SCccTcc11B.1.177.330.001645
N46P46SCccTcc11B.1.177.440.000519
N46P46SCccTcc11B.1.177.540.000606
N46P46SCccTcc11B.1.177.560.000668
N46P46SCccTcc11B.1.177.70.000165
N46P46SCccTcc11B.1.177.770.000726
N46P46SCccTcc11B.1.214.20.0006
N46P46SCccTcc11B.1.258.170.000104
N46P46SCccTcc11B.1.3490.000715
N46P46SCccTcc11B.1.351.20.000303
N46P46SCccTcc11B.1.36.220.001208
N46P46SCccTcc11B.1.3960.000706
N46P46SCccTcc11B.1.4030.003268
N46P46SCccTcc11B.1.4050.012346
N46P46SCccTcc11B.1.416.10.001563
N46P46SCccTcc11B.1.5580.004566
N46P46SCccTcc11B.1.5640.000426
N46P46SCccTcc11B.1.5680.001111
N46P46SCccTcc11B.1.5870.001898
N46P46SCccTcc11B.1.5950.000261
N46P46SCccTcc11B.1.6030.010638
N46P46SCccTcc11B.1.6090.000479
N46P46SCccTcc11B.1.617.30.002985
N46P46SCccTcc11B.1.619.10.000641
N46P46SCccTcc11B.1.621.10.000506
N46P46SCccTcc11B.400.000364
N46P46SCccTcc11C.130.025641
N46P46SCccTcc11C.160.00106
N46P46SCccTcc11P.1.100.000269
N46P46SCccTcc11P.1.70.000319
N46P46SCccTcc11Q.80.000165
N46P46SCccTcc11W.10.008696