CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 365 | P365S | nonsyn | Cca | Tca | 23495 | 23483 | 0.999489 | 29366-29368 | |
N | 365 | P365S | nonsyn | CCA | AGC | 23495 | 5 | 0.000212811 | 29366-29368 | |
N | 365 | P365S | nonsyn | CCA | AGT | 23495 | 4 | 0.000170249 | 29366-29368 | |
N | 365 | P365S | nonsyn | CcA | TcC | 23495 | 2 | 0.0000851245 | 29366-29368 | |
N | 365 | P365S | nonsyn | CcA | TcG | 23495 | 1 | 0.0000425622 | 29366-29368 |
Details of the mutation P365S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 365 | P365S | Cca | Tca | 23483 | 23495 | All | 0.004491 |
N | 365 | P365S | CCA | AGC | 5 | 23495 | All | 0.000001 |
N | 365 | P365S | CCA | AGT | 4 | 23495 | All | 0.000001 |
N | 365 | P365S | CcA | TcC | 2 | 23495 | All | 0 |
N | 365 | P365S | CcA | TcG | 1 | 23495 | All | 0 |
N | 365 | P365S | Cca | Tca | 6485 | 6485 | B.1.177 | 0.085392 |
N | 365 | P365S | Cca | Tca | 6016 | 6016 | B.1.177.12 | 0.912621 |
N | 365 | P365S | Cca | Tca | 1574 | 1574 | A.2.5 | 0.785429 |
N | 365 | P365S | Cca | Tca | 1213 | 1213 | B.1.177.35 | 0.838286 |
N | 365 | P365S | Cca | Tca | 1035 | 1035 | B.1.177.42 | 0.92576 |
N | 365 | P365S | Cca | Tca | 943 | 943 | B.1.177.44 | 0.489362 |
N | 365 | P365S | Cca | Tca | 879 | 888 | B.1.1.7 | 0.000787 |
N | 365 | P365S | CCA | AGC | 4 | 888 | B.1.1.7 | 0.000004 |
N | 365 | P365S | CCA | AGT | 4 | 888 | B.1.1.7 | 0.000004 |
N | 365 | P365S | CcA | TcG | 1 | 888 | B.1.1.7 | 0.000001 |
N | 365 | P365S | Cca | Tca | 585 | 585 | B.1.177.11 | 0.993209 |
N | 365 | P365S | Cca | Tca | 563 | 563 | B.1.177.33 | 0.925987 |
N | 365 | P365S | Cca | Tca | 499 | 499 | A.2.5.2 | 0.784591 |
N | 365 | P365S | Cca | Tca | 405 | 405 | AY.4 | 0.00063 |
N | 365 | P365S | Cca | Tca | 390 | 390 | B.1.177.41 | 0.975 |
N | 365 | P365S | Cca | Tca | 324 | 324 | B.1.177.43 | 0.478582 |
N | 365 | P365S | Cca | Tca | 179 | 179 | A.2.5.1 | 0.860577 |
N | 365 | P365S | Cca | Tca | 173 | 173 | B.1.177.40 | 0.891753 |
N | 365 | P365S | Cca | Tca | 159 | 159 | B.1.1 | 0.002884 |
N | 365 | P365S | Cca | Tca | 156 | 158 | B.1 | 0.001429 |
N | 365 | P365S | CcA | TcC | 2 | 158 | B.1 | 0.000018 |
N | 365 | P365S | Cca | Tca | 112 | 112 | AY.3 | 0.001114 |
N | 365 | P365S | Cca | Tca | 103 | 103 | B.1.617.2 | 0.000388 |
N | 365 | P365S | Cca | Tca | 95 | 95 | AY.9.2 | 0.003489 |
N | 365 | P365S | Cca | Tca | 90 | 90 | B.1.177.38 | 0.9375 |
N | 365 | P365S | Cca | Tca | 83 | 83 | AY.43 | 0.000368 |
N | 365 | P365S | Cca | Tca | 78 | 78 | A.2.5.3 | 0.804124 |
N | 365 | P365S | Cca | Tca | 77 | 77 | AY.25 | 0.000463 |
N | 365 | P365S | Cca | Tca | 69 | 69 | B.1.429 | 0.001623 |
N | 365 | P365S | Cca | Tca | 66 | 66 | B.1.2 | 0.000581 |
N | 365 | P365S | Cca | Tca | 65 | 65 | AY.44 | 0.000396 |
N | 365 | P365S | Cca | Tca | 62 | 62 | B.1.177.36 | 1 |
N | 365 | P365S | Cca | Tca | 60 | 60 | B.1.177.39 | 0.923077 |
N | 365 | P365S | Cca | Tca | 46 | 46 | B.1.160.30 | 0.136905 |
N | 365 | P365S | Cca | Tca | 40 | 41 | P.1 | 0.00063 |
N | 365 | P365S | CCA | AGC | 1 | 41 | P.1 | 0.000016 |
N | 365 | P365S | Cca | Tca | 40 | 40 | AY.103 | 0.000248 |
N | 365 | P365S | Cca | Tca | 33 | 33 | B.1.177.37 | 0.891892 |
N | 365 | P365S | Cca | Tca | 29 | 29 | B.1.427 | 0.001464 |
N | 365 | P365S | Cca | Tca | 28 | 28 | B.1.282 | 0.41791 |
N | 365 | P365S | Cca | Tca | 26 | 26 | B.1.177.57 | 0.007305 |
N | 365 | P365S | Cca | Tca | 23 | 23 | B.1.36 | 0.003356 |
N | 365 | P365S | Cca | Tca | 17 | 17 | B.1.1.519 | 0.000675 |
N | 365 | P365S | Cca | Tca | 17 | 17 | P.1.15 | 0.00395 |
N | 365 | P365S | Cca | Tca | 16 | 16 | B.1.1.420 | 0.016097 |
N | 365 | P365S | Cca | Tca | 16 | 16 | B.1.177.34 | 0.842105 |
N | 365 | P365S | Cca | Tca | 15 | 15 | B.1.351 | 0.000446 |
N | 365 | P365S | Cca | Tca | 14 | 14 | AY.39 | 0.000346 |
N | 365 | P365S | Cca | Tca | 14 | 14 | B | 0.001789 |
N | 365 | P365S | Cca | Tca | 13 | 13 | B.1.160 | 0.000405 |
N | 365 | P365S | Cca | Tca | 13 | 13 | B.1.177.6 | 0.012695 |
N | 365 | P365S | Cca | Tca | 13 | 13 | B.1.526 | 0.000306 |
N | 365 | P365S | Cca | Tca | 12 | 12 | AY.120 | 0.000446 |
N | 365 | P365S | Cca | Tca | 12 | 12 | AY.54 | 0.001144 |
N | 365 | P365S | Cca | Tca | 11 | 11 | AY.4.2 | 0.000239 |
N | 365 | P365S | Cca | Tca | 11 | 11 | AY.5 | 0.000227 |
N | 365 | P365S | Cca | Tca | 11 | 11 | B.1.177.75 | 0.011446 |
N | 365 | P365S | Cca | Tca | 11 | 11 | B.1.525 | 0.001245 |
N | 365 | P365S | Cca | Tca | 10 | 10 | AY.102 | 0.000265 |
N | 365 | P365S | Cca | Tca | 10 | 10 | B.1.1.277 | 0.007587 |
N | 365 | P365S | Cca | Tca | 9 | 9 | AY.29 | 0.000142 |
N | 365 | P365S | Cca | Tca | 9 | 9 | AY.46.4 | 0.001481 |
N | 365 | P365S | Cca | Tca | 9 | 9 | B.1.258 | 0.000599 |
N | 365 | P365S | Cca | Tca | 9 | 9 | B.1.388 | 0.818182 |
N | 365 | P365S | Cca | Tca | 9 | 9 | B.1.517 | 0.003843 |
N | 365 | P365S | Cca | Tca | 8 | 8 | B.1.1.433 | 0.011396 |
N | 365 | P365S | Cca | Tca | 8 | 8 | B.1.177.9 | 0.010652 |
N | 365 | P365S | Cca | Tca | 7 | 7 | AY.104 | 0.013889 |
N | 365 | P365S | Cca | Tca | 7 | 7 | AY.92 | 0.002011 |
N | 365 | P365S | Cca | Tca | 7 | 7 | B.1.503 | 0.017413 |
N | 365 | P365S | Cca | Tca | 6 | 6 | AY.100 | 0.000276 |
N | 365 | P365S | Cca | Tca | 6 | 6 | AY.26 | 0.00017 |
N | 365 | P365S | Cca | Tca | 6 | 6 | AY.39.1 | 0.000238 |
N | 365 | P365S | Cca | Tca | 6 | 6 | AY.9 | 0.000406 |
N | 365 | P365S | Cca | Tca | 6 | 6 | B.1.1.372 | 0.004132 |
N | 365 | P365S | Cca | Tca | 6 | 6 | B.1.160.32 | 0.025751 |
N | 365 | P365S | Cca | Tca | 6 | 6 | B.1.243 | 0.000418 |
N | 365 | P365S | Cca | Tca | 6 | 6 | B.1.375 | 0.004918 |
N | 365 | P365S | Cca | Tca | 6 | 6 | B.1.416.1 | 0.009375 |
N | 365 | P365S | Cca | Tca | 6 | 6 | C.36 | 0.005464 |
N | 365 | P365S | Cca | Tca | 5 | 5 | AY.10 | 0.00265 |
N | 365 | P365S | Cca | Tca | 5 | 5 | AY.111 | 0.000916 |
N | 365 | P365S | Cca | Tca | 5 | 5 | AY.119 | 0.000177 |
N | 365 | P365S | Cca | Tca | 5 | 5 | AY.20 | 0.000194 |
N | 365 | P365S | Cca | Tca | 5 | 5 | AY.98.1 | 0.000242 |
N | 365 | P365S | Cca | Tca | 5 | 5 | AY.99.2 | 0.000461 |
N | 365 | P365S | Cca | Tca | 5 | 5 | B.1.1.214 | 0.000277 |
N | 365 | P365S | Cca | Tca | 5 | 5 | B.1.621 | 0.000443 |
N | 365 | P365S | Cca | Tca | 5 | 5 | R.1 | 0.00045 |
N | 365 | P365S | Cca | Tca | 4 | 4 | AY.113 | 0.00057 |
N | 365 | P365S | Cca | Tca | 4 | 4 | AY.121 | 0.000541 |
N | 365 | P365S | Cca | Tca | 4 | 4 | AY.23 | 0.000279 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.1.198 | 0.005874 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.1.273 | 0.027027 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.1.318 | 0.001207 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.177.21 | 0.000306 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.177.31 | 0.045977 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.177.86 | 0.000734 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.221 | 0.000284 |
N | 365 | P365S | Cca | Tca | 4 | 4 | B.1.466.2 | 0.001565 |
N | 365 | P365S | Cca | Tca | 4 | 4 | D.2 | 0.0003 |
N | 365 | P365S | Cca | Tca | 4 | 4 | P.1.12 | 0.001936 |
N | 365 | P365S | Cca | Tca | 3 | 3 | AY.117 | 0.000254 |
N | 365 | P365S | Cca | Tca | 3 | 3 | AY.118 | 0.000188 |
N | 365 | P365S | Cca | Tca | 3 | 3 | AY.4.3 | 0.002525 |
N | 365 | P365S | Cca | Tca | 3 | 3 | AY.45 | 0.000365 |
N | 365 | P365S | Cca | Tca | 3 | 3 | AY.57 | 0.001969 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.1.28 | 0.000934 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.1.389 | 0.018182 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.1.39 | 0.001529 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.177.17 | 0.002463 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.177.73 | 0.001699 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.258.17 | 0.000312 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.36.18 | 0.001261 |
N | 365 | P365S | Cca | Tca | 3 | 3 | B.1.506 | 0.071429 |
N | 365 | P365S | Cca | Tca | 3 | 3 | C.37 | 0.000348 |
N | 365 | P365S | Cca | Tca | 3 | 3 | P.1.14 | 0.000143 |
N | 365 | P365S | Cca | Tca | 2 | 2 | A.23.1 | 0.001408 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.110 | 0.000225 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.114 | 0.000462 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.14 | 0.000176 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.27 | 0.000129 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.3.1 | 0.000171 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.46 | 0.000208 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.7.1 | 0.000225 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.75 | 0.000112 |
N | 365 | P365S | Cca | Tca | 2 | 2 | AY.98 | 0.000158 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.1.176 | 0.000879 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.1.348 | 0.001592 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.1.432 | 0.002532 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.160.10 | 0.016129 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.177.3 | 0.015267 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.177.45 | 0.000762 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.177.5 | 0.002484 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.177.52 | 0.003515 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.177.65 | 0.001331 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.239 | 0.002442 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.36.39 | 0.004435 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.39 | 0.007812 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.469 | 0.00722 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.595 | 0.000522 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.596 | 0.000174 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.617.1 | 0.000258 |
N | 365 | P365S | Cca | Tca | 2 | 2 | B.1.628 | 0.000705 |
N | 365 | P365S | Cca | Tca | 2 | 2 | P.1.16 | 0.000748 |
N | 365 | P365S | Cca | Tca | 2 | 2 | P.2 | 0.000373 |
N | 365 | P365S | Cca | Tca | 2 | 2 | Q.8 | 0.00033 |
N | 365 | P365S | Cca | Tca | 1 | 1 | A | 0.000387 |
N | 365 | P365S | Cca | Tca | 1 | 1 | A.1 | 0.000282 |
N | 365 | P365S | Cca | Tca | 1 | 1 | A.2 | 0.000662 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AD.2 | 0.000219 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AW.1 | 0.003049 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.106 | 0.000335 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.108 | 0.001103 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.116 | 0.000287 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.16 | 0.00038 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.33 | 0.000067 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.34 | 0.000097 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.34.1 | 0.00051 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.35 | 0.000233 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.4.4 | 0.000409 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.4.5 | 0.000107 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.47 | 0.000031 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.49 | 0.003195 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.5.4 | 0.000277 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.51 | 0.000909 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.55 | 0.000917 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.59 | 0.00053 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.6 | 0.000041 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.61 | 0.000105 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.62 | 0.000436 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.7 | 0.000196 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.70 | 0.000209 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.71 | 0.000475 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.72 | 0.001361 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.74 | 0.000116 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.9.1 | 0.000084 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.91 | 0.00073 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.96 | 0.002075 |
N | 365 | P365S | Cca | Tca | 1 | 1 | AY.99 | 0.001049 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.125 | 0.010204 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.137 | 0.0125 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.189 | 0.001513 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.220 | 0.001859 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.265 | 0.003155 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.269 | 0.001353 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.27 | 0.00565 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.294 | 0.001266 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.302 | 0.002075 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.304 | 0.002809 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.315 | 0.008475 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.33 | 0.000421 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.37 | 0.000193 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.385 | 0.004464 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.521 | 0.005348 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.70 | 0.000341 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.1.83 | 0.00271 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.147 | 0.000756 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.157 | 0.002985 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.170 | 0.00431 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.177.23 | 0.003236 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.177.50 | 0.004695 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.177.81 | 0.000189 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.177.84 | 0.006667 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.179 | 0.003759 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.206 | 0.000816 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.214.2 | 0.0006 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.222 | 0.001692 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.234 | 0.000132 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.240 | 0.000216 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.258.11 | 0.000396 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.258.21 | 0.007752 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.258.4 | 0.003448 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.260 | 0.003344 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.36.22 | 0.001208 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.36.37 | 0.002778 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.36.8 | 0.001 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.360 | 0.012658 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.371 | 0.001122 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.396 | 0.000706 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.497 | 0.000315 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.540 | 0.009709 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.561 | 0.000397 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.565 | 0.00081 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.575 | 0.000303 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.576 | 0.000907 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.577 | 0.000687 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.585 | 0.027778 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.593 | 0.01087 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.597 | 0.00463 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.606 | 0.006024 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.609 | 0.000479 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.619 | 0.000871 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.619.1 | 0.000641 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.621.1 | 0.000506 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.623 | 0.000536 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.627 | 0.00202 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.1.636 | 0.006711 |
N | 365 | P365S | Cca | Tca | 1 | 1 | B.55 | 0.00295 |
N | 365 | P365S | Cca | Tca | 1 | 1 | C.35 | 0.000774 |
N | 365 | P365S | Cca | Tca | 1 | 1 | N.5 | 0.001767 |
N | 365 | P365S | Cca | Tca | 1 | 1 | N.9 | 0.005952 |
N | 365 | P365S | Cca | Tca | 1 | 1 | P.1.4 | 0.000977 |
N | 365 | P365S | Cca | Tca | 1 | 1 | P.1.9 | 0.004808 |
N | 365 | P365S | Cca | Tca | 1 | 1 | P.3 | 0.001595 |
N | 365 | P365S | Cca | Tca | 1 | 1 | W.1 | 0.008696 |
N | 365 | P365S | Cca | Tca | 1 | 1 | W.3 | 0.005263 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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