CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P207L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N207P207LnonsyncCtcTt53505350128892-28894

Details of the mutation P207L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N207P207LcCtcTt53505350All0.001023
N207P207LcCtcTt35083508B.1.3110.963207
N207P207LcCtcTt874874AY.730.581504
N207P207LcCtcTt265265B.1.5990.967153
N207P207LcCtcTt130130AY.260.00368
N207P207LcCtcTt122122B.10.001117
N207P207LcCtcTt121121B.1.1.70.000108
N207P207LcCtcTt2222B.1.617.20.000083
N207P207LcCtcTt2020B.1.10.000363
N207P207LcCtcTt1919B.1.20.000167
N207P207LcCtcTt1515AY.130.002415
N207P207LcCtcTt1515B.1.5770.010309
N207P207LcCtcTt1313P.10.000205
N207P207LcCtcTt1212B.1.4890.521739
N207P207LcCtcTt1111B.1.1490.037671
N207P207LcCtcTt1111B.1.2100.023454
N207P207LcCtcTt99AY.200.00035
N207P207LcCtcTt88AY.40.000012
N207P207LcCtcTt88B.1.177.730.00453
N207P207LcCtcTt88B.1.5960.000697
N207P207LcCtcTt77B.1.2790.003595
N207P207LcCtcTt55AY.30.00005
N207P207LcCtcTt55B.1.1.3060.002192
N207P207LcCtcTt44AY.330.000267
N207P207LcCtcTt44AY.430.000018
N207P207LcCtcTt44B0.000511
N207P207LcCtcTt44B.1.1.1860.013746
N207P207LcCtcTt44B.1.6090.001918
N207P207LcCtcTt33AE.80.001467
N207P207LcCtcTt33AY.1030.000019
N207P207LcCtcTt33AY.440.000018
N207P207LcCtcTt33AY.710.001425
N207P207LcCtcTt33B.1.1.2140.000166
N207P207LcCtcTt33B.1.1.2800.009259
N207P207LcCtcTt33B.1.1.3180.000905
N207P207LcCtcTt33B.1.1.500.002037
N207P207LcCtcTt33B.1.4280.003061
N207P207LcCtcTt33B.1.5760.00272
N207P207LcCtcTt33C.160.003181
N207P207LcCtcTt33D.20.000225
N207P207LcCtcTt22AY.1140.000462
N207P207LcCtcTt22AY.4.20.000043
N207P207LcCtcTt22AY.420.00008
N207P207LcCtcTt22AY.740.000231
N207P207LcCtcTt22AY.750.000112
N207P207LcCtcTt22B.1.1.10.000653
N207P207LcCtcTt22B.1.1.330.000842
N207P207LcCtcTt22B.1.1.4020.022222
N207P207LcCtcTt22B.1.1.4220.090909
N207P207LcCtcTt22B.1.1770.000026
N207P207LcCtcTt22B.1.2580.000133
N207P207LcCtcTt22B.1.3240.00321
N207P207LcCtcTt22B.1.3440.016393
N207P207LcCtcTt22B.1.390.007812
N207P207LcCtcTt22B.1.5490.014388
N207P207LcCtcTt22B.1.5800.00813
N207P207LcCtcTt22B.1.6370.000146
N207P207LcCtcTt22P.1.170.000324
N207P207LcCtcTt11A0.000387
N207P207LcCtcTt11A.10.000282
N207P207LcCtcTt11AY.250.000006
N207P207LcCtcTt11AY.280.00189
N207P207LcCtcTt11AY.290.000016
N207P207LcCtcTt11AY.3.10.000085
N207P207LcCtcTt11AY.4.50.000107
N207P207LcCtcTt11AY.400.000964
N207P207LcCtcTt11AY.50.000021
N207P207LcCtcTt11AY.680.000274
N207P207LcCtcTt11AY.75.10.00018
N207P207LcCtcTt11B.1.1.1760.000439
N207P207LcCtcTt11B.1.1.2070.001182
N207P207LcCtcTt11B.1.1.2220.000204
N207P207LcCtcTt11B.1.1.2510.007937
N207P207LcCtcTt11B.1.1.2630.001558
N207P207LcCtcTt11B.1.1.2770.000759
N207P207LcCtcTt11B.1.1.2980.000862
N207P207LcCtcTt11B.1.1.3110.000358
N207P207LcCtcTt11B.1.1.3850.004464
N207P207LcCtcTt11B.1.1.390.00051
N207P207LcCtcTt11B.1.1.5190.00004
N207P207LcCtcTt11B.1.1190.010526
N207P207LcCtcTt11B.1.1260.001276
N207P207LcCtcTt11B.1.1600.000031
N207P207LcCtcTt11B.1.177.40.000211
N207P207LcCtcTt11B.1.2410.000812
N207P207LcCtcTt11B.1.2430.00007
N207P207LcCtcTt11B.1.3020.013333
N207P207LcCtcTt11B.1.3250.006897
N207P207LcCtcTt11B.1.3670.000792
N207P207LcCtcTt11B.1.3690.000285
N207P207LcCtcTt11B.1.4000.000429
N207P207LcCtcTt11B.1.4270.00005
N207P207LcCtcTt11B.1.4290.000024
N207P207LcCtcTt11B.1.4920.007042
N207P207LcCtcTt11B.1.5010.007353
N207P207LcCtcTt11B.1.5950.000261
N207P207LcCtcTt11B.1.6050.005952
N207P207LcCtcTt11B.1.780.008547
N207P207LcCtcTt11B.1.940.027027
N207P207LcCtcTt11B.400.000364
N207P207LcCtcTt11P.1.100.000269
N207P207LcCtcTt11P.1.120.000484
N207P207LcCtcTt11P.1.140.000048
N207P207LcCtcTt11P.1.150.000232
N207P207LcCtcTt11P.1.160.000374
N207P207LcCtcTt11P.1.70.000319
N207P207LcCtcTt11Q.10.000126
N207P207LcCtcTt11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

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