CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P199S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N199P199SnonsynCcaTca653564390.9853128868-28870
N199P199SnonsynCcATcC6535710.010864628868-28870
N199P199SnonsynCcATcT6535250.0038255528868-28870

Details of the mutation P199S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N199P199SCcaTca64396535All0.001232
N199P199SCcATcC716535All0.000014
N199P199SCcATcT256535All0.000005
N199P199SCcaTca18571857B.1.1.390.946483
N199P199SCcaTca743743AY.40.001156
N199P199SCcaTca470565B.1.438.10.050413
N199P199SCcATcC71565B.1.438.10.007616
N199P199SCcATcT24565B.1.438.10.002574
N199P199SCcaTca310310B.1.1.70.000278
N199P199SCcaTca261261AY.1030.001621
N199P199SCcaTca260260AY.250.001564
N199P199SCcaTca260260B.1.5670.866667
N199P199SCcaTca192192B.1.617.20.000723
N199P199SCcaTca148148B.10.001356
N199P199SCcaTca136136B.1.10.002467
N199P199SCcaTca101101B.1.36.180.042437
N199P199SCcaTca9797AY.430.00043
N199P199SCcaTca9191B.1.160.80.117268
N199P199SCcaTca7575AY.440.000457
N199P199SCcaTca6262AY.4.20.001345
N199P199SCcaTca6060B.1.6370.004384
N199P199SCcaTca5959B.4.70.59596
N199P199SCcaTca4545AA.81
N199P199SCcaTca4444B.1.1770.000579
N199P199SCcaTca4242B.1.2340.005542
N199P199SCcaTca4040AY.260.001132
N199P199SCcaTca3535B.1.1600.001092
N199P199SCcaTca3434AY.1200.001264
N199P199SCcaTca3333AY.30.000328
N199P199SCcaTca3333B.1.1.4340.011502
N199P199SCcaTca2828AY.1020.000742
N199P199SCcaTca2727B.1.4270.001363
N199P199SCcaTca2626P.10.00041
N199P199SCcaTca2525C.370.002902
N199P199SCcaTca2424B.1.1.2770.018209
N199P199SCcaTca2222P.1.130.019766
N199P199SCcaTca2121B.1.5950.00548
N199P199SCcaTca1919AY.1170.001606
N199P199SCcaTca1919B.1.1.280.005913
N199P199SCcaTca1818AY.570.011811
N199P199SCcaTca1717N.50.030035
N199P199SCcaTca1515B.1.1.5190.000596
N199P199SCcaTca1515B.30.012458
N199P199SCcaTca1414AQ.11
N199P199SCcaTca1313B.1.1.1610.045936
N199P199SCcaTca1313B.1.2580.000865
N199P199SCcaTca1313B.1.4290.000306
N199P199SCcaTca1313B.1.466.20.005086
N199P199SCcaTca1212B.1.1110.014101
N199P199SCcaTca1212B.1.2060.009788
N199P199SCcaTca1212B.1.5090.01039
N199P199SCcaTca1111AY.1000.000506
N199P199SCcaTca1111AY.200.000428
N199P199SCcaTca1111AY.290.000174
N199P199SCcaTca1111B.1.1.2220.002244
N199P199SCcaTca1111B.1.6210.000974
N199P199SCcaTca1010A.2.50.00499
N199P199SCcaTca1010AY.1190.000353
N199P199SCcaTca1010AY.7.20.005593
N199P199SCcaTca1010B.1.1280.006353
N199P199SCcaTca99A.190.084906
N199P199SCcaTca99AQ.21
N199P199SCcaTca99AY.230.000628
N199P199SCcaTca99AY.390.000222
N199P199SCcaTca99B.1.258.140.008824
N199P199SCcaTca88AY.340.000776
N199P199SCcaTca88AY.450.000973
N199P199SCcaTca88AY.46.40.001316
N199P199SCcaTca88AY.470.000249
N199P199SCcaTca88AY.75.10.001442
N199P199SCcaTca88B.1.2430.000557
N199P199SCcaTca88P.1.70.002554
N199P199SCcaTca77AY.140.000616
N199P199SCcaTca77AY.98.10.000339
N199P199SCcaTca77B.1.1.10.002287
N199P199SCcaTca66AY.120.10.001926
N199P199SCcaTca66AY.46.60.000433
N199P199SCcaTca66B0.000767
N199P199SCcaTca66B.1.1.2070.007092
N199P199SCcaTca66B.1.110.10.6
N199P199SCcaTca66B.400.002186
N199P199SCcaTca66L.30.021277
N199P199SCcaTca55AP.10.007508
N199P199SCcaTca55AY.330.000334
N199P199SCcaTca55AY.460.00052
N199P199SCcaTca55AY.70.00098
N199P199SCcaTca55AY.9.20.000184
N199P199SCcaTca55B.1.1490.017123
N199P199SCcaTca55B.1.3150.030303
N199P199SCcaTca55B.1.3510.000149
N199P199SCcaTca55B.1.3660.02439
N199P199SCcaTca55B.1.5820.002453
N199P199SCcaTca55P.1.140.000239
N199P199SCcaTca55Q.80.000825
N199P199SCcaTca44AK.10.050633
N199P199SCcaTca44AY.1160.001147
N199P199SCcaTca44AY.120.001264
N199P199SCcaTca44AY.300.001583
N199P199SCcaTca44AY.720.005442
N199P199SCcaTca44AY.860.00332
N199P199SCcaTca44B.1.1.2940.005063
N199P199SCcaTca44B.1.1.3170.001647
N199P199SCcaTca44B.1.160.320.017167
N199P199SCcaTca44B.1.2210.000284
N199P199SCcaTca44B.1.36.10.004561
N199P199SCcaTca44B.1.5650.003241
N199P199SCcaTca44C.350.003096
N199P199SCcaTca33AY.1180.000188
N199P199SCcaTca33AY.270.000194
N199P199SCcaTca33AY.3.10.000256
N199P199SCcaTca33AY.34.10.00153
N199P199SCcaTca33AY.360.000445
N199P199SCcaTca33AY.4.50.000322
N199P199SCcaTca33AY.46.10.00308
N199P199SCcaTca33AY.46.50.000595
N199P199SCcaTca33AY.5.30.001012
N199P199SCcaTca33AY.980.000237
N199P199SCcaTca33B.1.1.3890.018182
N199P199SCcaTca33B.1.1.4060.019481
N199P199SCcaTca33B.1.3200.003736
N199P199SCcaTca33B.1.36.350.007812
N199P199SCcaTca33B.1.3960.002117
N199P199SCcaTca33B.1.5260.000071
N199P199SCcaTca33B.1.5380.024194
N199P199SCcaTca33B.1.6200.002838
N199P199SCcaTca33D.20.000225
N199P199SCcaTca33P.1.10.000953
N199P199SCcaTca33P.20.00056
N199P199SCcaTca22A.10.000564
N199P199SCcaTca22AY.1060.00067
N199P199SCcaTca22AY.1210.000271
N199P199SCcaTca22AY.39.10.000079
N199P199SCcaTca22AY.420.00008
N199P199SCcaTca22AY.620.000871
N199P199SCcaTca22AY.660.002139
N199P199SCcaTca22AY.750.000112
N199P199SCcaTca22AY.90.000135
N199P199SCcaTca22AY.99.20.000184
N199P199SCcaTca22B.1.1.1700.002494
N199P199SCcaTca22B.1.1.2440.030769
N199P199SCcaTca22B.1.1.3310.023256
N199P199SCcaTca22B.1.1.370.000386
N199P199SCcaTca22B.1.1.4640.002946
N199P199SCcaTca22B.1.177.310.022989
N199P199SCcaTca22B.1.177.420.001789
N199P199SCcaTca22B.1.177.730.001133
N199P199SCcaTca22B.1.20.000018
N199P199SCcaTca22B.1.4000.000858
N199P199SCcaTca22B.1.5330.019231
N199P199SCcaTca22B.1.5610.000794
N199P199SCcaTca22B.1.6270.00404
N199P199SCcaTca11A.210.00277
N199P199SCcaTca11A.60.005128
N199P199SCcaTca11AA.10.007246
N199P199SCcaTca11AS.10.009524
N199P199SCcaTca11AY.1090.00074
N199P199SCcaTca11AY.1130.000142
N199P199SCcaTca11AY.1140.000231
N199P199SCcaTca11AY.116.10.000311
N199P199SCcaTca11AY.130.000161
N199P199SCcaTca11AY.160.00038
N199P199SCcaTca11AY.20.000356
N199P199SCcaTca11AY.23.10.000417
N199P199SCcaTca11AY.240.000431
N199P199SCcaTca11AY.29.10.000221
N199P199SCcaTca11AY.320.000532
N199P199SCcaTca11AY.4.40.000409
N199P199SCcaTca11AY.400.000964
N199P199SCcaTca11AY.46.20.000635
N199P199SCcaTca11AY.50.000021
N199P199SCcaTca11AY.510.000909
N199P199SCcaTca11AY.530.000288
N199P199SCcaTca11AY.580.000907
N199P199SCcaTca11AY.60.000041
N199P199SCcaTca11AY.610.000105
N199P199SCcaTca11AY.710.000475
N199P199SCcaTca11AY.790.001211
N199P199SCcaTca11AY.9.10.000084
N199P199SCcaTca11AY.950.000761
N199P199SCcaTca11AZ.50.003509
N199P199SCcaTca11B.1.1.1010.01
N199P199SCcaTca11B.1.1.1320.014925
N199P199SCcaTca11B.1.1.1740.003378
N199P199SCcaTca11B.1.1.1760.000439
N199P199SCcaTca11B.1.1.1860.003436
N199P199SCcaTca11B.1.1.2650.003155
N199P199SCcaTca11B.1.1.2730.006757
N199P199SCcaTca11B.1.1.2740.005051
N199P199SCcaTca11B.1.1.2910.000742
N199P199SCcaTca11B.1.1.3020.002075
N199P199SCcaTca11B.1.1.3030.002762
N199P199SCcaTca11B.1.1.3160.000925
N199P199SCcaTca11B.1.1.3290.003846
N199P199SCcaTca11B.1.1.330.000421
N199P199SCcaTca11B.1.1.3430.020833
N199P199SCcaTca11B.1.1.3720.000689
N199P199SCcaTca11B.1.1.4200.001006
N199P199SCcaTca11B.1.1.4330.001425
N199P199SCcaTca11B.1.1.4480.002033
N199P199SCcaTca11B.1.1.470.005348
N199P199SCcaTca11B.1.1.500.000679
N199P199SCcaTca11B.1.1.520.012195
N199P199SCcaTca11B.1.1.5280.004808
N199P199SCcaTca11B.1.1.700.000341
N199P199SCcaTca11B.1.1.890.006061
N199P199SCcaTca11B.1.1040.00369
N199P199SCcaTca11B.1.1530.018868
N199P199SCcaTca11B.1.160.300.002976
N199P199SCcaTca11B.1.177.230.003236
N199P199SCcaTca11B.1.177.440.000519
N199P199SCcaTca11B.1.177.500.004695
N199P199SCcaTca11B.1.177.560.000668
N199P199SCcATcT11B.1.177.630.002703
N199P199SCcaTca11B.1.177.790.002342
N199P199SCcaTca11B.1.177.830.001481
N199P199SCcaTca11B.1.2350.002519
N199P199SCcaTca11B.1.2400.000216
N199P199SCcaTca11B.1.2410.000812
N199P199SCcaTca11B.1.258.110.000396
N199P199SCcaTca11B.1.258.170.000104
N199P199SCcaTca11B.1.3190.003049
N199P199SCcaTca11B.1.3260.007576
N199P199SCcaTca11B.1.36.290.000517
N199P199SCcaTca11B.1.4110.003704
N199P199SCcaTca11B.1.416.10.001563
N199P199SCcaTca11B.1.4430.004673
N199P199SCcaTca11B.1.4690.00361
N199P199SCcaTca11B.1.4730.019231
N199P199SCcaTca11B.1.4990.00105
N199P199SCcaTca11B.1.5400.009709
N199P199SCcaTca11B.1.5740.002151
N199P199SCcaTca11B.1.5750.000303
N199P199SCcaTca11B.1.5880.00091
N199P199SCcaTca11B.1.617.10.000129
N199P199SCcaTca11B.1.6180.004032
N199P199SCcaTca11B.1.6250.002353
N199P199SCcaTca11B.1.6280.000352
N199P199SCcaTca11B.60.00091
N199P199SCcaTca11C.220.071429
N199P199SCcaTca11C.230.005814
N199P199SCcaTca11N.60.007092
N199P199SCcaTca11P.1.120.000484
N199P199SCcaTca11P.1.150.000232
N199P199SCcaTca11Q.10.000126
N199P199SCcaTca11R.10.00009