CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P199P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N199P199PsynccAccG10985470.49817928868-28870
N199P199PsynccAccT10984930.44899828868-28870
N199P199PsynccAccC1098580.052823328868-28870

Details of the mutation P199P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N199P199PccAccG5471098All0.000105
N199P199PccAccT4931098All0.000094
N199P199PccAccC581098All0.000011
N199P199PccAccG246247AY.260.006964
N199P199PccAccT1247AY.260.000028
N199P199PccAccT105105B.1.3571
N199P199PccAccT79102B.1.1.70.000071
N199P199PccAccG20102B.1.1.70.000018
N199P199PccAccC3102B.1.1.70.000003
N199P199PccAccT8888B.1.36.360.05298
N199P199PccAccT5258AY.250.000313
N199P199PccAccG458AY.250.000024
N199P199PccAccC258AY.250.000012
N199P199PccAccG4045AY.440.000243
N199P199PccAccT445AY.440.000024
N199P199PccAccC145AY.440.000006
N199P199PccAccG3644AY.1020.000955
N199P199PccAccC444AY.1020.000106
N199P199PccAccT444AY.1020.000106
N199P199PccAccG2540B.1.617.20.000094
N199P199PccAccT840B.1.617.20.00003
N199P199PccAccC740B.1.617.20.000026
N199P199PccAccT1636AY.40.000025
N199P199PccAccG1536AY.40.000023
N199P199PccAccC536AY.40.000008
N199P199PccAccT2424B.1.617.10.003095
N199P199PccAccT1123B.10.000101
N199P199PccAccG923B.10.000082
N199P199PccAccC323B.10.000027
N199P199PccAccG1320AY.1030.000081
N199P199PccAccT420AY.1030.000025
N199P199PccAccC320AY.1030.000019
N199P199PccAccT1215AY.30.000119
N199P199PccAccC215AY.30.00002
N199P199PccAccG115AY.30.00001
N199P199PccAccG1115AY.430.000049
N199P199PccAccT315AY.430.000013
N199P199PccAccC115AY.430.000004
N199P199PccAccG1415B.1.3510.000416
N199P199PccAccC115B.1.3510.00003
N199P199PccAccG911AY.98.10.000436
N199P199PccAccT211AY.98.10.000097
N199P199PccAccC88AY.1180.000501
N199P199PccAccG88AY.590.004237
N199P199PccAccG77AY.1130.000997
N199P199PccAccG77AY.46.60.000505
N199P199PccAccT67AY.470.000187
N199P199PccAccG17AY.470.000031
N199P199PccAccG46AY.460.000416
N199P199PccAccC26AY.460.000208
N199P199PccAccG66B.1.5070.067416
N199P199PccAccT55AY.1170.000423
N199P199PccAccG35B.1.2580.0002
N199P199PccAccT25B.1.2580.000133
N199P199PccAccG35P.10.000047
N199P199PccAccT25P.10.000032
N199P199PccAccT44AY.330.000267
N199P199PccAccT44AY.390.000099
N199P199PccAccT34AY.720.004082
N199P199PccAccC14AY.720.001361
N199P199PccAccG24B.1.1770.000026
N199P199PccAccT14B.1.1770.000013
N199P199PccAccC14B.1.1770.000013
N199P199PccAccG44B.1.177.860.000734
N199P199PccAccG44P.20.000747
N199P199PccAccC230.111111
N199P199PccAccT130.055556
N199P199PccAccG33A0.001161
N199P199PccAccG23AY.200.000078
N199P199PccAccC13AY.200.000039
N199P199PccAccG33AY.580.002722
N199P199PccAccG33AY.650.001599
N199P199PccAccG33AY.90.000203
N199P199PccAccG23B.1.10.000036
N199P199PccAccT13B.1.10.000018
N199P199PccAccT33B.1.1.2320.005445
N199P199PccAccT33B.1.1.3690.001339
N199P199PccAccG23B.1.360.000292
N199P199PccAccT13B.1.360.000146
N199P199PccAccT33B.1.438.10.000322
N199P199PccAccT33B.1.5260.000071
N199P199PccAccG23B.1.6210.000177
N199P199PccAccC13B.1.6210.000089
N199P199PccAccT22AY.1000.000092
N199P199PccAccC12AY.39.10.00004
N199P199PccAccG12AY.39.10.00004
N199P199PccAccG12AY.450.000122
N199P199PccAccT12AY.450.000122
N199P199PccAccG22AY.46.40.000329
N199P199PccAccG12AY.5.30.000337
N199P199PccAccT12AY.5.30.000337
N199P199PccAccT12AY.530.000288
N199P199PccAccG12AY.530.000288
N199P199PccAccG22AY.75.10.000361
N199P199PccAccG12AY.9.10.000084
N199P199PccAccT12AY.9.10.000084
N199P199PccAccT22AY.940.000885
N199P199PccAccT12B.1.1.5190.00004
N199P199PccAccG12B.1.1.5190.00004
N199P199PccAccT22B.1.177.120.000303
N199P199PccAccG12B.1.2210.000071
N199P199PccAccC12B.1.2210.000071
N199P199PccAccT22B.1.2340.000264
N199P199PccAccC22B.1.3770.009132
N199P199PccAccC22B.1.4000.000858
N199P199PccAccT12B.1.4270.00005
N199P199PccAccG12B.1.4270.00005
N199P199PccAccT22B.1.4290.000047
N199P199PccAccG22B.1.6280.000705
N199P199PccAccT22B.1.6370.000146
N199P199PccAccG11AY.1070.000466
N199P199PccAccT11AY.1160.000287
N199P199PccAccG11AY.1190.000035
N199P199PccAccT11AY.120.000316
N199P199PccAccG11AY.120.10.000321
N199P199PccAccG11AY.140.000088
N199P199PccAccG11AY.190.00114
N199P199PccAccG11AY.270.000065
N199P199PccAccT11AY.3.10.000085
N199P199PccAccG11AY.360.000148
N199P199PccAccG11AY.370.000316
N199P199PccAccG11AY.4.10.000737
N199P199PccAccG11AY.4.20.000022
N199P199PccAccG11AY.4.2.10.000149
N199P199PccAccC11AY.4.50.000107
N199P199PccAccT11AY.540.000095
N199P199PccAccT11AY.610.000105
N199P199PccAccT11AY.70.000196
N199P199PccAccT11AY.840.000437
N199P199PccAccG11AY.9.20.000037
N199P199PccAccT11AY.980.000079
N199P199PccAccC11B0.000128
N199P199PccAccG11B.1.1.1760.000439
N199P199PccAccT11B.1.1.2940.001266
N199P199PccAccT11B.1.1.3720.000689
N199P199PccAccT11B.1.1.4850.016667
N199P199PccAccG11B.1.1280.000635
N199P199PccAccC11B.1.1600.000031
N199P199PccAccG11B.1.160.160.000929
N199P199PccAccT11B.1.160.260.002421
N199P199PccAccG11B.1.20.000009
N199P199PccAccG11B.1.2230.002778
N199P199PccAccG11B.1.258.170.000104
N199P199PccAccT11B.1.3360.002439
N199P199PccAccT11B.1.36.170.000494
N199P199PccAccG11B.1.3690.000285
N199P199PccAccT11B.1.4700.001404
N199P199PccAccT11B.1.4970.000315
N199P199PccAccG11B.60.00091
N199P199PccAccT11C.36.30.000567
N199P199PccAccC11N.100.029412
N199P199PccAccT11P.1.10.000318
N199P199PccAccG11P.1.170.000162
N199P199PccAccT11P.30.001595
N199P199PccAccT11Q.10.000126