CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P162X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N162P162XnonsynCCTTAA63490.77777828757-28759
N162P162XnonsynCCTTGA6370.11111128757-28759
N162P162XnonsynCCTTAG6370.11111128757-28759

Details of the mutation P162X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N162P162XCCTTAA4963All0.000009
N162P162XCCTTGA763All0.000001
N162P162XCCTTAG763All0.000001
N162P162XCCTTAA1829B.10.000165
N162P162XCCTTAG729B.10.000064
N162P162XCCTTGA429B.10.000037
N162P162XCCTTAA89B.1.1770.000105
N162P162XCCTTGA19B.1.1770.000013
N162P162XCCTTAA44B.1.10.000073
N162P162XCCTTAA33B.1.2580.0002
N162P162XCCTTAA22B.1.1600.000062
N162P162XCCTTAA22B.1.20.000018
N162P162XCCTTGA12B.1.5760.000907
N162P162XCCTTAA12B.1.5760.000907
N162P162XCCTTAA11B.1.1.1700.001247
N162P162XCCTTAA11B.1.1.1890.001513
N162P162XCCTTAA11B.1.1.1930.111111
N162P162XCCTTAA11B.1.1.2770.000759
N162P162XCCTTAA11B.1.1.3010.001179
N162P162XCCTTAA11B.1.1.5150.02
N162P162XCCTTAA11B.1.1.70.000001
N162P162XCCTTAA11B.1.177.440.000519
N162P162XCCTTAA11B.1.2210.000071
N162P162XCCTTAA11B.1.2930.0125
N162P162XCCTTGA11B.1.6090.000479
N162P162XCCTTAA11B.1.780.008547