CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P162T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N162P162TnonsynCctAct195970.49743628757-28759
N162P162TnonsynCcTAcC195460.23589728757-28759
N162P162TnonsynCcTAcA195430.22051328757-28759
N162P162TnonsynCcTAcG19590.046153828757-28759

Details of the mutation P162T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N162P162TCctAct97195All0.000019
N162P162TCcTAcC46195All0.000009
N162P162TCcTAcA43195All0.000008
N162P162TCcTAcG9195All0.000002
N162P162TCctAct3173B.10.000284
N162P162TCcTAcC2173B.10.000192
N162P162TCcTAcA1673B.10.000147
N162P162TCcTAcG573B.10.000046
N162P162TCctAct923B.1.1770.000119
N162P162TCcTAcA723B.1.1770.000092
N162P162TCcTAcC723B.1.1770.000092
N162P162TCctAct1013B.1.1.70.000009
N162P162TCcTAcG213B.1.1.70.000002
N162P162TCcTAcA113B.1.1.70.000001
N162P162TCctAct512B.1.10.000091
N162P162TCcTAcC412B.1.10.000073
N162P162TCcTAcA212B.1.10.000036
N162P162TCcTAcG112B.1.10.000018
N162P162TCcTAcA410B.1.20.000035
N162P162TCctAct410B.1.20.000035
N162P162TCcTAcC210B.1.20.000018
N162P162TCcTAcA39B.1.2580.0002
N162P162TCcTAcC39B.1.2580.0002
N162P162TCctAct39B.1.2580.0002
N162P162TCctAct66AY.40.000009
N162P162TCctAct36B.1.1600.000094
N162P162TCcTAcA26B.1.1600.000062
N162P162TCcTAcC16B.1.1600.000031
N162P162TCctAct44AY.1020.000106
N162P162TCctAct24B.1.1.390.001019
N162P162TCcTAcA14B.1.1.390.00051
N162P162TCcTAcC14B.1.1.390.00051
N162P162TCctAct44B.1.617.20.000015
N162P162TCctAct13B.1.1.1700.001247
N162P162TCcTAcC13B.1.1.1700.001247
N162P162TCcTAcA13B.1.1.1700.001247
N162P162TCctAct13B.1.1.5150.02
N162P162TCcTAcC13B.1.1.5150.02
N162P162TCcTAcA13B.1.1.5150.02
N162P162TCcTAcC13B.1.2210.000071
N162P162TCcTAcA13B.1.2210.000071
N162P162TCctAct13B.1.2210.000071
N162P162TCcTAcG13B.1.6090.000479
N162P162TCctAct13B.1.6090.000479
N162P162TCcTAcA13B.1.6090.000479
N162P162TCctAct13B.1.780.008547
N162P162TCcTAcA13B.1.780.008547
N162P162TCcTAcC13B.1.780.008547
N162P162TCcTAcC12B.1.177.440.000519
N162P162TCctAct12B.1.177.440.000519
N162P162TCcTAcC12B.1.177.860.000183
N162P162TCctAct12B.1.177.860.000183
N162P162TCcTAcA12B.1.258.110.000396
N162P162TCctAct12B.1.258.110.000396
N162P162TCctAct12B.1.3890.001002
N162P162TCcTAcA12B.1.3890.001002
N162P162TCctAct12B.1.5250.000113
N162P162TCcTAcC12B.1.5250.000113
N162P162TCctAct110.055556
N162P162TCctAct11AY.430.000004
N162P162TCctAct11AY.440.000006
N162P162TCctAct11AY.550.000917
N162P162TCctAct11AY.980.000079
N162P162TCctAct11B.1.5960.000087