CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = P162A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N162P162AnonsynCctGct33220.66666728757-28759
N162P162AnonsynCcTGcA3340.12121228757-28759
N162P162AnonsynCcTGcC3340.12121228757-28759
N162P162AnonsynCcTGcG3330.090909128757-28759

Details of the mutation P162A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N162P162ACctGct2233All0.000004
N162P162ACcTGcA433All0.000001
N162P162ACcTGcC433All0.000001
N162P162ACcTGcG333All0.000001
N162P162ACctGct817B.10.000073
N162P162ACcTGcG317B.10.000027
N162P162ACcTGcC317B.10.000027
N162P162ACcTGcA317B.10.000027
N162P162ACctGct99AY.9.20.000331
N162P162ACcTGcA13B.1.2930.0125
N162P162ACcTGcC13B.1.2930.0125
N162P162ACctGct13B.1.2930.0125
N162P162ACctGct11AY.230.00007
N162P162ACctGct11AY.440.000006
N162P162ACctGct11B.1.1.70.000001
N162P162ACctGct11B.1.5960.000087