CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = N : Mut = P13L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
N	13	P13L		nonsyn	cCc	cTc	34360	33734	0.981781	28310-28312
N	13	P13L		nonsyn	cCC	cTT	34360	626	0.0182189	28310-28312

Details of the mutation P13L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
N	13	P13L	cCc	cTc	33734	34360	All	0.006452
N	13	P13L	cCC	cTT	626	34360	All	0.00012
N	13	P13L	cCc	cTc	12624	13189	B.1.526	0.296721
N	13	P13L	cCC	cTT	565	13189	B.1.526	0.01328
N	13	P13L	cCc	cTc	8454	8477	C.37	0.981198
N	13	P13L	cCC	cTT	23	8477	C.37	0.002669
N	13	P13L	cCc	cTc	1558	1558	B.1.619.1	0.999359
N	13	P13L	cCc	cTc	1116	1116	B.1.619	0.972125
N	13	P13L	cCc	cTc	1055	1055	B.6.6	0.937778
N	13	P13L	cCc	cTc	1027	1032	B.6	0.934486
N	13	P13L	cCC	cTT	5	1032	B.6	0.00455
N	13	P13L	cCc	cTc	858	858	B.1.2	0.007555
N	13	P13L	cCc	cTc	592	592	A.2.2	1
N	13	P13L	cCc	cTc	450	450	AY.26	0.01274
N	13	P13L	cCc	cTc	437	437	B.1.1.7	0.000391
N	13	P13L	cCc	cTc	409	410	B.1	0.003746
N	13	P13L	cCC	cTT	1	410	B.1	0.000009
N	13	P13L	cCc	cTc	371	371	C.37.1	0.971204
N	13	P13L	cCc	cTc	330	330	B.1.243	0.022963
N	13	P13L	cCc	cTc	324	324	B.1.241	0.262987
N	13	P13L	cCc	cTc	235	235	AY.4	0.000366
N	13	P13L	cCc	cTc	226	226	C.1.2	0.961702
N	13	P13L	cCc	cTc	222	222	P.7	0.969432
N	13	P13L	cCc	cTc	213	213	B.1.351	0.006332
N	13	P13L	cCc	cTc	180	181	B.1.1	0.003265
N	13	P13L	cCC	cTT	1	181	B.1.1	0.000018
N	13	P13L	cCc	cTc	145	145	AY.25	0.000872
N	13	P13L	cCc	cTc	143	143	P.1	0.002253
N	13	P13L	cCc	cTc	121	121	AY.44	0.000736
N	13	P13L	cCc	cTc	121	121	B.6.8	1
N	13	P13L	cCc	cTc	121	121	C.38	0.975806
N	13	P13L	cCc	cTc	107	107	AP.1	0.160661
N	13	P13L	cCc	cTc	79	104	B.1.617.2	0.000297
N	13	P13L	cCC	cTT	25	104	B.1.617.2	0.000094
N	13	P13L	cCc	cTc	85	85	B.1.177	0.001119
N	13	P13L	cCc	cTc	77	77	B.1.1.28	0.023965
N	13	P13L	cCc	cTc	75	75	B.1.258	0.004991
N	13	P13L	cCc	cTc	68	68	B.1.243.2	0.985507
N	13	P13L	cCc	cTc	63	63	B.1.1.284	0.006766
N	13	P13L	cCc	cTc	61	61	B.1.36.23	1
N	13	P13L	cCc	cTc	50	50	AY.107	0.023299
N	13	P13L	cCc	cTc	49	49	B.1.118	0.328859
N	13	P13L	cCc	cTc	45	45	AY.42	0.00181
N	13	P13L	cCc	cTc	41	43	AY.43	0.000182
N	13	P13L	cCC	cTT	2	43	AY.43	0.000009
N	13	P13L	cCc	cTc	43	43	B.1.429	0.001012
N	13	P13L	cCc	cTc	40	40	AY.103	0.000248
N	13	P13L	cCc	cTc	38	38	B.1.239	0.046398
N	13	P13L	cCc	cTc	38	38	B.6.1	1
N	13	P13L	cCc	cTc	37	37	B.6.3	0.973684
N	13	P13L	cCc	cTc	37	37	C.36.3.1	0.100543
N	13	P13L	cCc	cTc	35	35	B.3.1	0.058043
N	13	P13L	cCc	cTc	30	30	B.1.1.222	0.00612
N	13	P13L	cCc	cTc	30	30	B.1.427	0.001515
N	13	P13L	cCc	cTc	28	28	B	0.003579
N	13	P13L	cCc	cTc	28	28	B.1.1.519	0.001112
N	13	P13L	cCc	cTc	28	28	B.1.1.70	0.00955
N	13	P13L	cCc	cTc	28	28	B.1.160	0.000873
N	13	P13L	cCc	cTc	28	28	R.1	0.00252
N	13	P13L	cCc	cTc	27	27	B.1.221	0.001918
N	13	P13L	cCc	cTc	27	27	B.1.36.29	0.013968
N	13	P13L	cCc	cTc	22	22	B.6.4	1
N	13	P13L	cCc	cTc	20	20	B.1.617.1	0.002579
N	13	P13L	cCc	cTc	19	19	C.36.3	0.010777
N	13	P13L	cCc	cTc	18	18	A	0.006966
N	13	P13L	cCc	cTc	18	18	B.1.1.33	0.007576
N	13	P13L	cCc	cTc	18	18	B.1.621.1	0.009105
N	13	P13L	cCc	cTc	17	17	AY.27	0.0011
N	13	P13L	cCc	cTc	17	17	AY.3	0.000169
N	13	P13L	cCc	cTc	17	17	B.1.1.312	0.032505
N	13	P13L	cCc	cTc	17	17	B.1.214.2	0.010192
N	13	P13L	cCc	cTc	16	16	B.1.1.303	0.044199
N	13	P13L	cCc	cTc	16	16	B.1.234	0.002111
N	13	P13L	cCc	cTc	16	16	B.1.258.17	0.001664
N	13	P13L	cCc	cTc	16	16	B.1.575	0.004854
N	13	P13L	cCc	cTc	16	16	B.1.637	0.001169
N	13	P13L	cCc	cTc	16	16	B.6.2	1
N	13	P13L	cCc	cTc	15	15	B.1.596	0.001307
N	13	P13L	cCc	cTc	15	15	P.1.14	0.000717
N	13	P13L	cCc	cTc	11	14	AY.102	0.000292
N	13	P13L	cCC	cTT	3	14	AY.102	0.00008
N	13	P13L	cCc	cTc	13	13	AY.47	0.000404
N	13	P13L	cCc	cTc	13	13	AY.75	0.000728
N	13	P13L	cCc	cTc	13	13	B.1.621	0.001151
N	13	P13L	cCc	cTc	13	13	B.6.5	1
N	13	P13L	cCc	cTc	13	13	P.1.15	0.00302
N	13	P13L	cCc	cTc	12	12	AY.119	0.000424
N	13	P13L	cCc	cTc	12	12	AY.85	0.005126
N	13	P13L	cCc	cTc	12	12	B.1.623	0.006438
N	13	P13L	cCc	cTc	11	11	AY.6	0.000452
N	13	P13L	cCc	cTc	11	11	AY.91	0.008035
N	13	P13L	cCc	cTc	11	11	B.1.1.318	0.003319
N	13	P13L	cCc	cTc	11	11	B.1.157	0.032836
N	13	P13L	cCc	cTc	10	10	AY.16	0.003797
N	13	P13L	cCc	cTc	10	10	AY.39	0.000247
N	13	P13L	cCc	cTc	10	10	B.1.1.25	0.005685
N	13	P13L	cCc	cTc	10	10	D.5	0.049751
N	13	P13L	cCc	cTc	9	9	AY.23	0.000628
N	13	P13L	cCc	cTc	9	9	AY.4.2.1	0.001341
N	13	P13L	cCc	cTc	9	9	AY.5	0.000186
N	13	P13L	cCc	cTc	9	9	AY.9.1	0.000754
N	13	P13L	cCc	cTc	9	9	B.1.177.7	0.001484
N	13	P13L	cCc	cTc	9	9	B.1.609	0.004314
N	13	P13L	cCc	cTc	8	8	B.1.1.216	0.007124
N	13	P13L	cCc	cTc	7	7	AY.110	0.000789
N	13	P13L	cCc	cTc	7	7	AY.2	0.002493
N	13	P13L	cCc	cTc	7	7	AY.4.2	0.000152
N	13	P13L	cCc	cTc	7	7	AY.9.2	0.000257
N	13	P13L	cCc	cTc	7	7	B.1.1.220	0.013011
N	13	P13L	cCc	cTc	7	7	B.1.1.434	0.00244
N	13	P13L	cCc	cTc	7	7	B.1.1.63	0.002701
N	13	P13L	cCc	cTc	7	7	B.1.177.73	0.003964
N	13	P13L	cCc	cTc	7	7	B.1.632	0.04698
N	13	P13L	cCc	cTc	6	6	B.1.1.198	0.008811
N	13	P13L	cCc	cTc	6	6	B.1.1.291	0.004454
N	13	P13L	cCc	cTc	6	6	B.1.1.432	0.007595
N	13	P13L	cCc	cTc	6	6	B.1.369	0.001711
N	13	P13L	cCc	cTc	5	5	AY.100	0.00023
N	13	P13L	cCc	cTc	5	5	AY.20	0.000194
N	13	P13L	cCc	cTc	5	5	AY.33	0.000334
N	13	P13L	cCc	cTc	5	5	AY.61	0.000524
N	13	P13L	cCc	cTc	5	5	B.1.1.1	0.001633
N	13	P13L	cCc	cTc	5	5	B.1.1.372	0.003444
N	13	P13L	cCc	cTc	5	5	B.1.177.81	0.000947
N	13	P13L	cCc	cTc	5	5	B.1.210	0.010661
N	13	P13L	cCc	cTc	5	5	B.1.36.1	0.005701
N	13	P13L	cCc	cTc	5	5	B.1.465	0.019011
N	13	P13L	cCc	cTc	5	5	B.1.468	0.028571
N	13	P13L	cCc	cTc	5	5	B.1.544	0.03012
N	13	P13L	cCc	cTc	5	5	B.1.576	0.004533
N	13	P13L	cCc	cTc	5	5	B.1.578	0.089286
N	13	P13L	cCc	cTc	5	5	B.41	0.04
N	13	P13L	cCc	cTc	5	5	C.16	0.005302
N	13	P13L	cCc	cTc	5	5	P.1.12	0.00242
N	13	P13L	cCc	cTc	5	5	P.5	0.068493
N	13	P13L	cCc	cTc	4	4	AY.117	0.000338
N	13	P13L	cCc	cTc	4	4	AY.29	0.000063
N	13	P13L	cCc	cTc	4	4	AY.40	0.003857
N	13	P13L	cCc	cTc	4	4	AY.5.4	0.001107
N	13	P13L	cCc	cTc	4	4	AY.65	0.002132
N	13	P13L	cCc	cTc	4	4	AY.69	0.000747
N	13	P13L	cCc	cTc	4	4	B.1.1.44	0.009639
N	13	P13L	cCc	cTc	4	4	B.1.36	0.000584
N	13	P13L	cCc	cTc	4	4	B.1.400	0.001716
N	13	P13L	cCc	cTc	4	4	D.2	0.0003
N	13	P13L	cCc	cTc	4	4	P.1.17	0.000647
N	13	P13L	cCc	cTc	3	3	AY.106	0.001005
N	13	P13L	cCc	cTc	3	3	AY.111	0.000549
N	13	P13L	cCc	cTc	3	3	AY.120	0.000112
N	13	P13L	cCc	cTc	3	3	AY.35	0.000699
N	13	P13L	cCc	cTc	3	3	AY.48	0.001395
N	13	P13L	cCc	cTc	3	3	AY.54	0.000286
N	13	P13L	cCc	cTc	3	3	AY.59	0.001589
N	13	P13L	cCc	cTc	3	3	AY.75.1	0.000541
N	13	P13L	cCc	cTc	3	3	B.1.1.189	0.004539
N	13	P13L	cCc	cTc	3	3	B.1.1.317	0.001235
N	13	P13L	cCc	cTc	3	3	B.1.1.376	0.017857
N	13	P13L	cCc	cTc	3	3	B.1.1.452	0.333333
N	13	P13L	cCc	cTc	3	3	B.1.1.526	0.010638
N	13	P13L	cCc	cTc	3	3	B.1.1.528	0.014423
N	13	P13L	cCc	cTc	3	3	B.1.110.3	0.002155
N	13	P13L	cCc	cTc	3	3	B.1.111	0.003525
N	13	P13L	cCc	cTc	3	3	B.1.139	0.002199
N	13	P13L	cCc	cTc	3	3	B.1.160.25	0.033333
N	13	P13L	cCc	cTc	3	3	B.1.177.40	0.015464
N	13	P13L	cCc	cTc	3	3	B.1.177.75	0.003122
N	13	P13L	cCc	cTc	3	3	B.1.219	0.028302
N	13	P13L	cCc	cTc	3	3	B.1.36.17	0.001482
N	13	P13L	cCc	cTc	3	3	B.1.389	0.003006
N	13	P13L	cCc	cTc	3	3	B.1.436	0.003086
N	13	P13L	cCc	cTc	3	3	B.1.587	0.005693
N	13	P13L	cCc	cTc	3	3	B.1.628	0.001057
N	13	P13L	cCc	cTc	3	3	N.4	0.012766
N	13	P13L	cCc	cTc	3	3	N.5	0.0053
N	13	P13L	cCc	cTc	3	3	P.1.1	0.000953
N	13	P13L	cCc	cTc	3	3	P.1.16	0.001122
N	13	P13L	cCc	cTc	3	3	P.1.2	0.003468
N	13	P13L	cCc	cTc	2	2	A.1	0.000564
N	13	P13L	cCc	cTc	2	2	A.24	0.142857
N	13	P13L	cCc	cTc	2	2	AY.121	0.000271
N	13	P13L	cCc	cTc	2	2	AY.14	0.000176
N	13	P13L	cCc	cTc	2	2	AY.23.1	0.000835
N	13	P13L	cCc	cTc	2	2	AY.28	0.003781
N	13	P13L	cCc	cTc	2	2	AY.3.1	0.000171
N	13	P13L	cCc	cTc	2	2	AY.39.1	0.000079
N	13	P13L	cCc	cTc	2	2	AY.45	0.000243
N	13	P13L	cCc	cTc	2	2	AY.46.6	0.000144
N	13	P13L	cCc	cTc	1	2	AY.62	0.000436
N	13	P13L	cCC	cTT	1	2	AY.62	0.000436
N	13	P13L	cCc	cTc	2	2	AY.71	0.00095
N	13	P13L	cCc	cTc	2	2	AY.9	0.000135
N	13	P13L	cCc	cTc	2	2	AY.98	0.000158
N	13	P13L	cCc	cTc	2	2	AY.98.1	0.000097
N	13	P13L	cCc	cTc	2	2	AZ.2	0.001642
N	13	P13L	cCc	cTc	2	2	B.1.1.176	0.000879
N	13	P13L	cCc	cTc	2	2	B.1.1.214	0.000111
N	13	P13L	cCc	cTc	2	2	B.1.1.343	0.041667
N	13	P13L	cCc	cTc	2	2	B.1.1.37	0.000386
N	13	P13L	cCc	cTc	2	2	B.1.1.416	0.00181
N	13	P13L	cCc	cTc	2	2	B.1.1.464	0.002946
N	13	P13L	cCc	cTc	2	2	B.1.1.466	0.017391
N	13	P13L	cCc	cTc	2	2	B.1.160.30	0.005952
N	13	P13L	cCc	cTc	2	2	B.1.177.21	0.000153
N	13	P13L	cCc	cTc	2	2	B.1.177.44	0.001038
N	13	P13L	cCc	cTc	2	2	B.1.177.57	0.000562
N	13	P13L	cCc	cTc	2	2	B.1.258.24	0.021505
N	13	P13L	cCc	cTc	2	2	B.1.311	0.000549
N	13	P13L	cCc	cTc	2	2	B.1.351.2	0.000605
N	13	P13L	cCc	cTc	2	2	B.1.375	0.001639
N	13	P13L	cCc	cTc	2	2	B.1.399	0.003868
N	13	P13L	cCc	cTc	2	2	B.1.416	0.002538
N	13	P13L	cCc	cTc	2	2	B.1.466.2	0.000782
N	13	P13L	cCc	cTc	2	2	B.1.523	0.004902
N	13	P13L	cCc	cTc	2	2	B.1.524	0.002813
N	13	P13L	cCc	cTc	2	2	B.1.558	0.009132
N	13	P13L	cCc	cTc	2	2	B.1.605	0.011905
N	13	P13L	cCc	cTc	2	2	B.39	0.004662
N	13	P13L	cCc	cTc	2	2	C.1	0.004785
N	13	P13L	cCc	cTc	2	2	C.14	0.008658
N	13	P13L	cCc	cTc	2	2	C.39	0.037736
N	13	P13L	cCc	cTc	2	2	N.3	0.011628
N	13	P13L	cCc	cTc	2	2	P.1.7	0.000639
N	13	P13L	cCc	cTc	2	2	P.3	0.00319
N	13	P13L	cCc	cTc	2	2	Q.1	0.000253
N	13	P13L	cCc	cTc	2	2	Q.8	0.00033
N	13	P13L	cCc	cTc	1	1	A.2.4	0.003367
N	13	P13L	cCc	cTc	1	1	A.2.5	0.000499
N	13	P13L	cCc	cTc	1	1	A.28	0.002646
N	13	P13L	cCc	cTc	1	1	A.30	0.142857
N	13	P13L	cCc	cTc	1	1	AD.2	0.000219
N	13	P13L	cCc	cTc	1	1	AM.4	0.003571
N	13	P13L	cCc	cTc	1	1	AY.105	0.000643
N	13	P13L	cCc	cTc	1	1	AY.113	0.000142
N	13	P13L	cCc	cTc	1	1	AY.116	0.000287
N	13	P13L	cCc	cTc	1	1	AY.116.1	0.000311
N	13	P13L	cCc	cTc	1	1	AY.118	0.000063
N	13	P13L	cCc	cTc	1	1	AY.13	0.000161
N	13	P13L	cCc	cTc	1	1	AY.32	0.000532
N	13	P13L	cCc	cTc	1	1	AY.34	0.000097
N	13	P13L	cCc	cTc	1	1	AY.46	0.000104
N	13	P13L	cCc	cTc	1	1	AY.5.3	0.000337
N	13	P13L	cCc	cTc	1	1	AY.53	0.000288
N	13	P13L	cCc	cTc	1	1	AY.60	0.000938
N	13	P13L	cCc	cTc	1	1	AY.72	0.001361
N	13	P13L	cCc	cTc	1	1	AY.74	0.000116
N	13	P13L	cCc	cTc	1	1	AY.92	0.000287
N	13	P13L	cCc	cTc	1	1	AY.93	0.000273
N	13	P13L	cCc	cTc	1	1	AY.99.2	0.000092
N	13	P13L	cCc	cTc	1	1	B.1.1.121	0.002427
N	13	P13L	cCc	cTc	1	1	B.1.1.141	0.002012
N	13	P13L	cCc	cTc	1	1	B.1.1.161	0.003534
N	13	P13L	cCc	cTc	1	1	B.1.1.192	0.002309
N	13	P13L	cCc	cTc	1	1	B.1.1.231	0.003096
N	13	P13L	cCc	cTc	1	1	B.1.1.232	0.001815
N	13	P13L	cCc	cTc	1	1	B.1.1.241	0.00207
N	13	P13L	cCc	cTc	1	1	B.1.1.243	0.004082
N	13	P13L	cCc	cTc	1	1	B.1.1.244	0.015385
N	13	P13L	cCc	cTc	1	1	B.1.1.256	0.013699
N	13	P13L	cCc	cTc	1	1	B.1.1.263	0.001558
N	13	P13L	cCc	cTc	1	1	B.1.1.265	0.003155
N	13	P13L	cCc	cTc	1	1	B.1.1.294	0.001266
N	13	P13L	cCc	cTc	1	1	B.1.1.306	0.000438
N	13	P13L	cCc	cTc	1	1	B.1.1.325	0.025641
N	13	P13L	cCc	cTc	1	1	B.1.1.337	0.003597
N	13	P13L	cCc	cTc	1	1	B.1.1.348	0.000796
N	13	P13L	cCc	cTc	1	1	B.1.1.39	0.00051
N	13	P13L	cCc	cTc	1	1	B.1.1.409	0.002833
N	13	P13L	cCc	cTc	1	1	B.1.1.411	0.014706
N	13	P13L	cCc	cTc	1	1	B.1.1.431	0.016129
N	13	P13L	cCc	cTc	1	1	B.1.1.441	0.05
N	13	P13L	cCc	cTc	1	1	B.1.1.448	0.002033
N	13	P13L	cCc	cTc	1	1	B.1.1.46	0.004367
N	13	P13L	cCc	cTc	1	1	B.1.1.50	0.000679
N	13	P13L	cCc	cTc	1	1	B.1.1.521	0.005348
N	13	P13L	cCc	cTc	1	1	B.1.1.524	0.020833
N	13	P13L	cCc	cTc	1	1	B.1.1.74	0.00431
N	13	P13L	cCc	cTc	1	1	B.1.1.88	0.071429
N	13	P13L	cCc	cTc	1	1	B.1.12	0.008
N	13	P13L	cCc	cTc	1	1	B.1.142	0.002899
N	13	P13L	cCc	cTc	1	1	B.1.147	0.000756
N	13	P13L	cCc	cTc	1	1	B.1.177.12	0.000152
N	13	P13L	cCc	cTc	1	1	B.1.177.60	0.000218
N	13	P13L	cCc	cTc	1	1	B.1.177.83	0.001481
N	13	P13L	cCc	cTc	1	1	B.1.214	0.003663
N	13	P13L	cCc	cTc	1	1	B.1.221.2	0.004016
N	13	P13L	cCc	cTc	1	1	B.1.232	0.000537
N	13	P13L	cCc	cTc	1	1	B.1.240	0.000216
N	13	P13L	cCc	cTc	1	1	B.1.247	0.014925
N	13	P13L	cCc	cTc	1	1	B.1.258.16	0.001637
N	13	P13L	cCc	cTc	1	1	B.1.260	0.003344
N	13	P13L	cCc	cTc	1	1	B.1.301	0.005917
N	13	P13L	cCc	cTc	1	1	B.1.305	0.002151
N	13	P13L	cCc	cTc	1	1	B.1.328	0.03125
N	13	P13L	cCc	cTc	1	1	B.1.343	0.020833
N	13	P13L	cCc	cTc	1	1	B.1.346	0.001311
N	13	P13L	cCc	cTc	1	1	B.1.349	0.000715
N	13	P13L	cCc	cTc	1	1	B.1.351.5	0.0006
N	13	P13L	cCc	cTc	1	1	B.1.36.36	0.000602
N	13	P13L	cCc	cTc	1	1	B.1.36.8	0.001
N	13	P13L	cCc	cTc	1	1	B.1.361	0.001289
N	13	P13L	cCc	cTc	1	1	B.1.367	0.000792
N	13	P13L	cCc	cTc	1	1	B.1.404	0.001302
N	13	P13L	cCc	cTc	1	1	B.1.409	0.000781
N	13	P13L	cCc	cTc	1	1	B.1.459	0.004082
N	13	P13L	cCc	cTc	1	1	B.1.462	0.007246
N	13	P13L	cCc	cTc	1	1	B.1.474	0.001901
N	13	P13L	cCc	cTc	1	1	B.1.493	0.025641
N	13	P13L	cCc	cTc	1	1	B.1.497	0.000315
N	13	P13L	cCc	cTc	1	1	B.1.499	0.00105
N	13	P13L	cCc	cTc	1	1	B.1.525	0.000113
N	13	P13L	cCc	cTc	1	1	B.1.530	0.007143
N	13	P13L	cCc	cTc	1	1	B.1.560	0.00463
N	13	P13L	cCc	cTc	1	1	B.1.561	0.000397
N	13	P13L	cCc	cTc	1	1	B.1.564	0.000426
N	13	P13L	cCc	cTc	1	1	B.1.568	0.001111
N	13	P13L	cCc	cTc	1	1	B.1.574	0.002151
N	13	P13L	cCc	cTc	1	1	B.1.595	0.000261
N	13	P13L	cCc	cTc	1	1	B.1.600	0.005848
N	13	P13L	cCc	cTc	1	1	B.1.620	0.000946
N	13	P13L	cCc	cTc	1	1	B.1.638	0.052632
N	13	P13L	cCc	cTc	1	1	B.1.78	0.008547
N	13	P13L	cCc	cTc	1	1	B.1.8	0.001972
N	13	P13L	cCc	cTc	1	1	B.1.81	0.021277
N	13	P13L	cCc	cTc	1	1	B.38	0.02381
N	13	P13L	cCc	cTc	1	1	B.4	0.002208
N	13	P13L	cCc	cTc	1	1	B.40	0.000364
N	13	P13L	cCc	cTc	1	1	B.55	0.00295
N	13	P13L	cCc	cTc	1	1	C.35	0.000774
N	13	P13L	cCc	cTc	1	1	P.1.13	0.000898
N	13	P13L	cCc	cTc	1	1	P.2	0.000187
N	13	P13L	cCc	cTc	1	1	W.3	0.005263

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.