CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = N126N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N126N126NsynaaCaaT2334123341128649-28651

Details of the mutation N126N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N126N126NaaCaaT2334123341All0.004464
N126N126NaaCaaT1367513675B.1.2210.971374
N126N126NaaCaaT29862986B.1.1.70.002673
N126N126NaaCaaT11871187B.1.221.30.989167
N126N126NaaCaaT685685AY.40.001066
N126N126NaaCaaT437437AY.9.20.016051
N126N126NaaCaaT344344B.1.221.11
N126N126NaaCaaT260260B.1.1.5190.010325
N126N126NaaCaaT243243B.1.221.20.975904
N126N126NaaCaaT239239B.1.221.40.995833
N126N126NaaCaaT228228B.1.617.20.000859
N126N126NaaCaaT215215AY.1030.001335
N126N126NaaCaaT190190B.1.20.001673
N126N126NaaCaaT182182B.10.001667
N126N126NaaCaaT167167AY.430.00074
N126N126NaaCaaT137137AY.250.000824
N126N126NaaCaaT125125B.1.1770.001646
N126N126NaaCaaT110110AY.440.00067
N126N126NaaCaaT9999AY.30.000985
N126N126NaaCaaT7979AK.11
N126N126NaaCaaT7272AY.98.10.003487
N126N126NaaCaaT7171B.1.10.001288
N126N126NaaCaaT6060B.1.36.210.12959
N126N126NaaCaaT5454B.1.4290.001271
N126N126NaaCaaT5353B.1.2430.003688
N126N126NaaCaaT5151P.10.000803
N126N126NaaCaaT4949B.1.1600.001528
N126N126NaaCaaT4242AY.1200.001562
N126N126NaaCaaT3737B.1.6050.220238
N126N126NaaCaaT3636AY.116.10.011211
N126N126NaaCaaT3535AY.4.2.10.005215
N126N126NaaCaaT3131AY.90.002095
N126N126NaaCaaT3030AY.3.10.002558
N126N126NaaCaaT2828AY.39.10.001109
N126N126NaaCaaT2828B.1.5250.003168
N126N126NaaCaaT2626B.1.5770.017869
N126N126NaaCaaT2525Q.80.004123
N126N126NaaCaaT2424B.1.3510.000713
N126N126NaaCaaT2323AY.1020.00061
N126N126NaaCaaT2323B.1.2580.001531
N126N126NaaCaaT2222AY.290.000347
N126N126NaaCaaT2222B.1.5960.001917
N126N126NaaCaaT2222C.360.020036
N126N126NaaCaaT2121AY.470.000653
N126N126NaaCaaT2121B.1.1.3710.21875
N126N126NaaCaaT2020B.1.1.1530.021906
N126N126NaaCaaT1818B.1.4700.025281
N126N126NaaCaaT1717AY.1000.000782
N126N126NaaCaaT1717AY.420.000684
N126N126NaaCaaT1717B.1.5820.008342
N126N126NaaCaaT1616B.1.1.3170.006587
N126N126NaaCaaT1414AY.200.000544
N126N126NaaCaaT1414AY.410.004115
N126N126NaaCaaT1414AY.60.000576
N126N126NaaCaaT1414B.1.2340.001847
N126N126NaaCaaT1414B.1.5260.000329
N126N126NaaCaaT1414B.1.6280.004933
N126N126NaaCaaT1313AY.230.000907
N126N126NaaCaaT1313B0.001662
N126N126NaaCaaT1313B.1.177.40.002744
N126N126NaaCaaT1313B.1.2100.027719
N126N126NaaCaaT1313C.370.001509
N126N126NaaCaaT1313D.20.000976
N126N126NaaCaaT1212AY.260.00034
N126N126NaaCaaT1212B.1.177.820.005728
N126N126NaaCaaT1111AY.390.000272
N126N126NaaCaaT1111AY.4.50.001182
N126N126NaaCaaT1111AY.5.30.003711
N126N126NaaCaaT1111P.20.002053
N126N126NaaCaaT1010AY.1210.001353
N126N126NaaCaaT1010AY.50.000206
N126N126NaaCaaT1010AY.610.001048
N126N126NaaCaaT1010AY.99.20.000922
N126N126NaaCaaT1010B.1.1.2140.000555
N126N126NaaCaaT99AY.300.003562
N126N126NaaCaaT99B.1.1.2220.001836
N126N126NaaCaaT99B.1.177.430.013294
N126N126NaaCaaT99B.1.3690.002567
N126N126NaaCaaT88AY.540.000763
N126N126NaaCaaT88AY.690.001493
N126N126NaaCaaT77AY.340.000679
N126N126NaaCaaT77AY.4.20.000152
N126N126NaaCaaT77B.1.1.700.002387
N126N126NaaCaaT77B.1.160.320.030043
N126N126NaaCaaT77B.1.36.10.007982
N126N126NaaCaaT77B.1.6200.006623
N126N126NaaCaaT77R.10.00063
N126N126NaaCaaT66A.210.01662
N126N126NaaCaaT66AY.1130.000854
N126N126NaaCaaT66AY.1160.001721
N126N126NaaCaaT66AY.1190.000212
N126N126NaaCaaT66AY.120.10.001926
N126N126NaaCaaT66AY.710.00285
N126N126NaaCaaT66B.1.1.3180.001811
N126N126NaaCaaT66B.1.1.4100.222222
N126N126NaaCaaT66B.1.6370.000438
N126N126NaaCaaT55AY.1100.000563
N126N126NaaCaaT55AY.160.001898
N126N126NaaCaaT55AY.450.000608
N126N126NaaCaaT55AY.570.003281
N126N126NaaCaaT55B.1.1.4480.010163
N126N126NaaCaaT55B.1.177.400.025773
N126N126NaaCaaT55B.1.258.170.00052
N126N126NaaCaaT55B.1.5750.001517
N126N126NaaCaaT55P.1.150.001162
N126N126NaaCaaT55Q.10.000632
N126N126NaaCaaT44AY.1060.00134
N126N126NaaCaaT44AY.750.000224
N126N126NaaCaaT44B.1.177.280.02963
N126N126NaaCaaT44P.1.140.000191
N126N126NaaCaaT33A0.001161
N126N126NaaCaaT33AY.1110.000549
N126N126NaaCaaT33AY.240.001293
N126N126NaaCaaT33AY.330.0002
N126N126NaaCaaT33AY.650.001599
N126N126NaaCaaT33AY.75.10.000541
N126N126NaaCaaT33B.1.1.1980.004405
N126N126NaaCaaT33B.1.1.3060.001315
N126N126NaaCaaT33B.1.1.4110.044118
N126N126NaaCaaT33B.1.177.440.001557
N126N126NaaCaaT33B.1.177.500.014085
N126N126NaaCaaT33B.1.177.620.003576
N126N126NaaCaaT33B.1.177.720.010169
N126N126NaaCaaT33B.1.177.730.001699
N126N126NaaCaaT33B.1.177.830.004444
N126N126NaaCaaT33B.1.2320.001612
N126N126NaaCaaT33B.1.3110.000824
N126N126NaaCaaT33B.1.3750.002459
N126N126NaaCaaT33B.1.438.10.000322
N126N126NaaCaaT33B.1.5170.001281
N126N126NaaCaaT33B.1.6210.000266
N126N126NaaCaaT33C.36.30.001702
N126N126NaaCaaT22A.280.005291
N126N126NaaCaaT22AY.1050.001286
N126N126NaaCaaT22AY.1090.001479
N126N126NaaCaaT22AY.1170.000169
N126N126NaaCaaT22AY.16.10.00094
N126N126NaaCaaT22AY.360.000296
N126N126NaaCaaT22AY.370.000632
N126N126NaaCaaT22AY.46.40.000329
N126N126NaaCaaT22AY.680.000547
N126N126NaaCaaT22AY.890.009804
N126N126NaaCaaT22AY.990.002099
N126N126NaaCaaT22B.1.1.10.000653
N126N126NaaCaaT22B.1.1.1610.007067
N126N126NaaCaaT22B.1.1.1890.003026
N126N126NaaCaaT22B.1.1.2940.002532
N126N126NaaCaaT22B.1.1.340.026316
N126N126NaaCaaT22B.1.1110.00235
N126N126NaaCaaT22B.1.177.210.000153
N126N126NaaCaaT22B.1.177.530.004785
N126N126NaaCaaT22B.1.2050.047619
N126N126NaaCaaT22B.1.3400.008584
N126N126NaaCaaT22B.1.360.000292
N126N126NaaCaaT22B.1.36.290.001035
N126N126NaaCaaT22B.1.36.360.001204
N126N126NaaCaaT22B.1.3610.002577
N126N126NaaCaaT22B.1.466.20.000782
N126N126NaaCaaT22B.1.5510.002581
N126N126NaaCaaT22B.1.5600.009259
N126N126NaaCaaT22B.1.5680.002222
N126N126NaaCaaT22B.1.5760.001813
N126N126NaaCaaT22B.1.5860.021978
N126N126NaaCaaT22B.1.5950.000522
N126N126NaaCaaT22B.1.6090.000959
N126N126NaaCaaT22B.400.000729
N126N126NaaCaaT22B.60.00182
N126N126NaaCaaT22P.1.170.000324
N126N126NaaCaaT11A.2.50.000499
N126N126NaaCaaT11A.23.10.000704
N126N126NaaCaaT11AU.10.001266
N126N126NaaCaaT11AU.20.002421
N126N126NaaCaaT11AY.10.000396
N126N126NaaCaaT11AY.1070.000466
N126N126NaaCaaT11AY.120.000316
N126N126NaaCaaT11AY.120.20.001285
N126N126NaaCaaT11AY.130.000161
N126N126NaaCaaT11AY.20.000356
N126N126NaaCaaT11AY.270.000065
N126N126NaaCaaT11AY.29.10.000221
N126N126NaaCaaT11AY.320.000532
N126N126NaaCaaT11AY.34.10.00051
N126N126NaaCaaT11AY.4.40.000409
N126N126NaaCaaT11AY.460.000104
N126N126NaaCaaT11AY.46.30.000934
N126N126NaaCaaT11AY.46.60.000072
N126N126NaaCaaT11AY.480.000465
N126N126NaaCaaT11AY.550.000917
N126N126NaaCaaT11AY.580.000907
N126N126NaaCaaT11AY.590.00053
N126N126NaaCaaT11AY.630.000387
N126N126NaaCaaT11AY.640.000595
N126N126NaaCaaT11AY.670.000464
N126N126NaaCaaT11AY.7.20.000559
N126N126NaaCaaT11AY.700.000209
N126N126NaaCaaT11AY.740.000116
N126N126NaaCaaT11AY.910.00073
N126N126NaaCaaT11AY.980.000079
N126N126NaaCaaT11AZ.20.000821
N126N126NaaCaaT11B.1.1.1570.000913
N126N126NaaCaaT11B.1.1.1620.029412
N126N126NaaCaaT11B.1.1.1630.007634
N126N126NaaCaaT11B.1.1.1700.001247
N126N126NaaCaaT11B.1.1.2000.007463
N126N126NaaCaaT11B.1.1.2510.007937
N126N126NaaCaaT11B.1.1.2860.002899
N126N126NaaCaaT11B.1.1.3160.000925
N126N126NaaCaaT11B.1.1.3260.001761
N126N126NaaCaaT11B.1.1.330.000421
N126N126NaaCaaT11B.1.1.3320.03125
N126N126NaaCaaT11B.1.1.3330.001076
N126N126NaaCaaT11B.1.1.3370.003597
N126N126NaaCaaT11B.1.1.3480.000796
N126N126NaaCaaT11B.1.1.3510.002793
N126N126NaaCaaT11B.1.1.3720.000689
N126N126NaaCaaT11B.1.1.3760.005952
N126N126NaaCaaT11B.1.1.390.00051
N126N126NaaCaaT11B.1.1.440.00241
N126N126NaaCaaT11B.1.1.4400.011765
N126N126NaaCaaT11B.1.1.4640.001473
N126N126NaaCaaT11B.1.1.470.005348
N126N126NaaCaaT11B.1.1.5150.02
N126N126NaaCaaT11B.1.1.580.005376
N126N126NaaCaaT11B.1.1.630.000386
N126N126NaaCaaT11B.1.1.830.00271
N126N126NaaCaaT11B.1.160.100.008065
N126N126NaaCaaT11B.1.160.160.000929
N126N126NaaCaaT11B.1.160.250.011111
N126N126NaaCaaT11B.1.177.150.000631
N126N126NaaCaaT11B.1.177.520.001757
N126N126NaaCaaT11B.1.177.570.000281
N126N126NaaCaaT11B.1.177.60.000977
N126N126NaaCaaT11B.1.177.70.000165
N126N126NaaCaaT11B.1.177.860.000183
N126N126NaaCaaT11B.1.2230.002778
N126N126NaaCaaT11B.1.2360.002053
N126N126NaaCaaT11B.1.2400.000216
N126N126NaaCaaT11B.1.243.10.022222
N126N126NaaCaaT11B.1.258.140.00098
N126N126NaaCaaT11B.1.258.50.008772
N126N126NaaCaaT11B.1.3080.034483
N126N126NaaCaaT11B.1.351.30.000876
N126N126NaaCaaT11B.1.36.170.000494
N126N126NaaCaaT11B.1.3800.006623
N126N126NaaCaaT11B.1.400.10.015152
N126N126NaaCaaT11B.1.4160.001269
N126N126NaaCaaT11B.1.4280.00102
N126N126NaaCaaT11B.1.440.008333
N126N126NaaCaaT11B.1.4410.009615
N126N126NaaCaaT11B.1.466.10.007194
N126N126NaaCaaT11B.1.4750.142857
N126N126NaaCaaT11B.1.4990.00105
N126N126NaaCaaT11B.1.5240.001406
N126N126NaaCaaT11B.1.5380.008065
N126N126NaaCaaT11B.1.5610.000397
N126N126NaaCaaT11B.1.5640.000426
N126N126NaaCaaT11B.1.5650.00081
N126N126NaaCaaT11B.1.5740.002151
N126N126NaaCaaT11B.1.575.10.002439
N126N126NaaCaaT11B.1.5970.00463
N126N126NaaCaaT11B.1.5990.00365
N126N126NaaCaaT11B.1.6060.006024
N126N126NaaCaaT11B.1.617.10.000129
N126N126NaaCaaT11B.1.621.10.000506
N126N126NaaCaaT11B.1.940.027027
N126N126NaaCaaT11B.30.000831
N126N126NaaCaaT11B.310.003731
N126N126NaaCaaT11C.160.00106
N126N126NaaCaaT11C.350.000774
N126N126NaaCaaT11P.70.004367
N126N126NaaCaaT11Q.30.000145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.